EMLSAG00000006366, EMLSAG00000006366-689132 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:T07A9.8 species:6239 "Caenorhabditis elegans" [GO:0008340 "determination of adult lifespan" evidence=IMP] InterPro:IPR007823 Pfam:PF05148 GO:GO:0005730 GO:GO:0006351 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 EMBL:FO081716 HOGENOM:HOG000020030 KO:K14850 OMA:MAHTPLE OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 PIR:T32579 RefSeq:NP_499920.1 UniGene:Cel.12379 ProteinModelPortal:O44410 SMR:O44410 STRING:6239.T07A9.8 PaxDb:O44410 PRIDE:O44410 EnsemblMetazoa:T07A9.8 GeneID:176864 KEGG:cel:CELE_T07A9.8 UCSC:T07A9.8 CTD:176864 WormBase:T07A9.8 GeneTree:ENSGT00390000006189 InParanoid:O44410 NextBio:894348 Uniprot:O44410) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-25 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 K + V D+ GEA + + ++++ SFD +A+N V CDMSK P SS DIV++C SLMGTNL D+++EA R+LK+ G LKIAEV SRF Sbjct: 194 KPDQQSVFDLGCGEAKIAEAVGEKHKIRSFDLVAVNDRVESCDMSKLPAEDSSADIVIYCLSLMGTNLYDFIREARRVLKIGGILKIAEVTSRF 287
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:T07A9.8 "Ribosomal RNA-processing protein 8" species:6239 "Caenorhabditis elegans" [GO:0000183 "chromatin silencing at rDNA" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005677 "chromatin silencing complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;ISS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0035064 "methylated histone residue binding" evidence=ISS] InterPro:IPR007823 Pfam:PF05148 GO:GO:0005730 GO:GO:0006351 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 EMBL:FO081716 HOGENOM:HOG000020030 KO:K14850 OMA:MAHTPLE OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 PIR:T32579 RefSeq:NP_499920.1 UniGene:Cel.12379 ProteinModelPortal:O44410 SMR:O44410 STRING:6239.T07A9.8 PaxDb:O44410 PRIDE:O44410 EnsemblMetazoa:T07A9.8 GeneID:176864 KEGG:cel:CELE_T07A9.8 UCSC:T07A9.8 CTD:176864 WormBase:T07A9.8 GeneTree:ENSGT00390000006189 InParanoid:O44410 NextBio:894348 Uniprot:O44410) HSP 1 Score: 102.834 bits (255), Expect = 2.017e-25 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 K + V D+ GEA + + ++++ SFD +A+N V CDMSK P SS DIV++C SLMGTNL D+++EA R+LK+ G LKIAEV SRF Sbjct: 194 KPDQQSVFDLGCGEAKIAEAVGEKHKIRSFDLVAVNDRVESCDMSKLPAEDSSADIVIYCLSLMGTNLYDFIREARRVLKIGGILKIAEVTSRF 287
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:CBG13492 "Ribosomal RNA-processing protein 8" species:6238 "Caenorhabditis briggsae" [GO:0000183 "chromatin silencing at rDNA" evidence=ISS] [GO:0005677 "chromatin silencing complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0035064 "methylated histone residue binding" evidence=ISS] InterPro:IPR007823 Pfam:PF05148 GO:GO:0005730 GO:GO:0006351 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 EMBL:HE600980 RefSeq:XP_002634957.1 ProteinModelPortal:A8XI07 STRING:6238.CBG13492 EnsemblMetazoa:CBG13492 GeneID:8576951 KEGG:cbr:CBG13492 CTD:8576951 WormBase:CBG13492 HOGENOM:HOG000020030 KO:K14850 OMA:MAHTPLE OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 Uniprot:A8XI07) HSP 1 Score: 98.9821 bits (245), Expect = 4.634e-24 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 K + V D+ GEA + + ++ + SFD +A+N V CDMSK P S D+V+FC SLMGTNL D++KEA R+L+ G LKI EV SRF Sbjct: 183 KPDKQAVFDLGCGEAKIAEAVGEKHTIRSFDLVAVNDRVESCDMSKLPAEDGSADVVIFCLSLMGTNLYDFIKEARRVLRTGGVLKIGEVTSRF 276
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:Rrp8 "Ribosomal RNA-processing protein 8" species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing at rDNA" evidence=ISS] [GO:0005677 "chromatin silencing complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0035064 "methylated histone residue binding" evidence=ISS] [GO:0042149 "cellular response to glucose starvation" evidence=IEA] [GO:0046015 "regulation of transcription by glucose" evidence=IEA] [GO:0071158 "positive regulation of cell cycle arrest" evidence=IEA] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=IEA] InterPro:IPR007823 InterPro:IPR023576 Pfam:PF05148 RGD:1308302 GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0006351 GO:GO:0042149 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0072332 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 GO:GO:0071158 GO:GO:0046015 KO:K14850 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 GeneTree:ENSGT00390000006189 CTD:23378 HOGENOM:HOG000164004 OMA:LMGTNIR TreeFam:TF313749 EMBL:BC085119 RefSeq:NP_001008347.1 UniGene:Rn.14828 ProteinModelPortal:Q5U4F0 STRING:10116.ENSRNOP00000025651 PaxDb:Q5U4F0 PRIDE:Q5U4F0 Ensembl:ENSRNOT00000025651 GeneID:308911 KEGG:rno:308911 UCSC:RGD:1308302 InParanoid:Q5U4F0 NextBio:659792 PRO:PR:Q5U4F0 Genevestigator:Q5U4F0 Uniprot:Q5U4F0) HSP 1 Score: 97.8265 bits (242), Expect = 2.263e-23 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 +K S VV D G+ L S R P FD AL+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QKPASLVVADFGCGDC----RLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRT 403
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:Rrp8 "ribosomal RNA processing 8, methyltransferase, homolog (yeast)" species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing at rDNA" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO] [GO:0005677 "chromatin silencing complex" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=ISO;ISS] [GO:0035064 "methylated histone residue binding" evidence=ISO;ISS] [GO:0042149 "cellular response to glucose starvation" evidence=IEA;ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0046015 "regulation of transcription by glucose" evidence=IEA;ISO] [GO:0071158 "positive regulation of cell cycle arrest" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=IEA;ISO] InterPro:IPR007823 InterPro:IPR023576 Pfam:PF05148 RGD:1308302 GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0006351 GO:GO:0042149 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0072332 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 GO:GO:0071158 GO:GO:0046015 KO:K14850 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 GeneTree:ENSGT00390000006189 CTD:23378 HOGENOM:HOG000164004 OMA:LMGTNIR TreeFam:TF313749 EMBL:BC085119 RefSeq:NP_001008347.1 UniGene:Rn.14828 ProteinModelPortal:Q5U4F0 STRING:10116.ENSRNOP00000025651 PaxDb:Q5U4F0 PRIDE:Q5U4F0 Ensembl:ENSRNOT00000025651 GeneID:308911 KEGG:rno:308911 UCSC:RGD:1308302 InParanoid:Q5U4F0 NextBio:659792 PRO:PR:Q5U4F0 Genevestigator:Q5U4F0 Uniprot:Q5U4F0) HSP 1 Score: 97.8265 bits (242), Expect = 2.263e-23 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 +K S VV D G+ L S R P FD AL+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QKPASLVVADFGCGDC----RLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRT 403
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:Rrp8 "ribosomal RNA processing 8, methyltransferase, homolog (yeast)" species:10090 "Mus musculus" [GO:0000183 "chromatin silencing at rDNA" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=ISO] [GO:0035064 "methylated histone residue binding" evidence=ISO] [GO:0042149 "cellular response to glucose starvation" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0046015 "regulation of transcription by glucose" evidence=ISO] [GO:0071158 "positive regulation of cell cycle arrest" evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=ISO] InterPro:IPR007823 Pfam:PF05148 MGI:MGI:1914251 GO:GO:0005730 GO:GO:0006351 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 KO:K14850 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 GeneTree:ENSGT00390000006189 CTD:23378 HOGENOM:HOG000164004 TreeFam:TF313749 EMBL:AK005138 EMBL:AK045361 EMBL:AK077786 EMBL:AK154858 EMBL:AK170257 EMBL:AK172189 EMBL:AK172224 EMBL:BC022923 EMBL:BC046799 RefSeq:NP_080173.1 UniGene:Mm.231400 ProteinModelPortal:Q9DB85 SMR:Q9DB85 BioGrid:221741 IntAct:Q9DB85 MINT:MINT-4128130 PhosphoSite:Q9DB85 PaxDb:Q9DB85 PRIDE:Q9DB85 Ensembl:ENSMUST00000033179 GeneID:101867 KEGG:mmu:101867 UCSC:uc009iyz.2 NextBio:355152 PRO:PR:Q9DB85 ArrayExpress:Q9DB85 Bgee:Q9DB85 CleanEx:MM_1500003O22RIK Genevestigator:Q9DB85 Uniprot:Q9DB85) HSP 1 Score: 97.4413 bits (241), Expect = 3.403e-23 Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 +K S VV D G+ L S R P FD +L+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QKPASLVVADFGCGDC----RLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRT 403
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:RRP8 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677 "chromatin silencing complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0035064 "methylated histone residue binding" evidence=IEA] [GO:0042149 "cellular response to glucose starvation" evidence=IEA] [GO:0046015 "regulation of transcription by glucose" evidence=IEA] [GO:0071158 "positive regulation of cell cycle arrest" evidence=IEA] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=IEA] InterPro:IPR007823 InterPro:IPR023576 Pfam:PF05148 PROSITE:PS01184 GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0042149 GO:GO:0008168 GO:GO:0032259 GO:GO:0000183 GO:GO:0072332 GO:GO:0005677 GO:GO:0033553 GO:GO:0071158 GO:GO:0046015 KO:K14850 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 GeneTree:ENSGT00390000006189 CTD:23378 OMA:LMGTNIR TreeFam:TF313749 EMBL:FP565445 RefSeq:XP_003357182.1 Ensembl:ENSSSCT00000022514 GeneID:100623550 KEGG:ssc:100623550 Uniprot:I3LPL4) HSP 1 Score: 96.6709 bits (239), Expect = 7.694e-23 Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 ++ S VV D G+ L S R P FD +L+ VT CDM++ PL +SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 308 QRPASLVVADFGCGDC----RLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDASVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRT 405
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:RRP8 "Ribosomal RNA-processing protein 8" species:9606 "Homo sapiens" [GO:0000183 "chromatin silencing at rDNA" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=TAS] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035064 "methylated histone residue binding" evidence=IDA] [GO:0042149 "cellular response to glucose starvation" evidence=IMP] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0046015 "regulation of transcription by glucose" evidence=IMP] [GO:0071158 "positive regulation of cell cycle arrest" evidence=IMP] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=IMP] InterPro:IPR007823 InterPro:IPR023576 Pfam:PF05148 GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0006351 GO:GO:0042149 GO:GO:0016568 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0072332 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 GO:GO:0071158 GO:GO:0008757 GO:GO:0046015 KO:K14850 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 EMBL:D87060 EMBL:AB007869 EMBL:BC001071 RefSeq:NP_056139.1 UniGene:Hs.652255 PDB:2ZFU PDBsum:2ZFU ProteinModelPortal:O43159 SMR:O43159 BioGrid:116954 DIP:DIP-46686N IntAct:O43159 MINT:MINT-4526401 STRING:9606.ENSP00000254605 PhosphoSite:O43159 SWISS-2DPAGE:O43159 PaxDb:O43159 PeptideAtlas:O43159 PRIDE:O43159 DNASU:23378 Ensembl:ENST00000254605 GeneID:23378 KEGG:hsa:23378 UCSC:uc001med.3 CTD:23378 GeneCards:GC11M006577 HGNC:HGNC:29030 HPA:HPA038487 neXtProt:NX_O43159 PharmGKB:PA164725550 HOGENOM:HOG000164004 InParanoid:O43159 OMA:LMGTNIR TreeFam:TF313749 EvolutionaryTrace:O43159 GeneWiki:KIAA0409 GenomeRNAi:23378 NextBio:45466 PRO:PR:O43159 ArrayExpress:O43159 Bgee:O43159 CleanEx:HS_KIAA0409 Genevestigator:O43159 Uniprot:O43159) HSP 1 Score: 95.9005 bits (237), Expect = 1.168e-22 Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 ++ S VV D G+ L S R P FD +L+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 305 QRPASLVVADFGCGDC----RLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRT 402
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:DDB_G0292960 "Ribosomal RNA-processing protein 8" species:44689 "Dictyostelium discoideum" [GO:0005730 "nucleolus" evidence=IEA;ISS] [GO:0032259 "methylation" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0035064 "methylated histone residue binding" evidence=ISS] [GO:0033553 "rDNA heterochromatin" evidence=ISS] [GO:0005677 "chromatin silencing complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA" evidence=ISS] InterPro:IPR007823 Pfam:PF05148 dictyBase:DDB_G0292960 GO:GO:0005730 EMBL:AAFI02000197 GO:GO:0006351 GO:GO:0016568 GO:GO:0008168 GO:GO:0000183 GO:GO:0035064 eggNOG:COG0500 GO:GO:0005677 GO:GO:0033553 GO:GO:0006364 KO:K14850 PANTHER:PTHR12787 RefSeq:XP_629375.1 ProteinModelPortal:Q54CP1 STRING:44689.DDBDRAFT_0219795 PRIDE:Q54CP1 EnsemblProtists:DDB0219795 GeneID:8628893 KEGG:ddi:DDB_G0292960 InParanoid:Q54CP1 OMA:HTISAVV Uniprot:Q54CP1) HSP 1 Score: 94.7449 bits (234), Expect = 1.737e-22 Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 9 VVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 + D+ GEA L L ++ + SFD +A+N VT CD+S PL + S+DI VFC SLMGTN D++ EA R+L G LKIAE+ESR D Sbjct: 232 IADLGCGEAKLAERLQHKHTIQSFDLVAVNERVTACDISNLPLKNESIDIAVFCLSLMGTNFIDFIIEAERVLVKGGLLKIAEIESRITD 321
BLAST of EMLSAG00000006366 vs. GO
Match: - (symbol:RRP8 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677 "chromatin silencing complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0035064 "methylated histone residue binding" evidence=IEA] [GO:0042149 "cellular response to glucose starvation" evidence=IEA] [GO:0046015 "regulation of transcription by glucose" evidence=IEA] [GO:0071158 "positive regulation of cell cycle arrest" evidence=IEA] [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class mediator" evidence=IEA] InterPro:IPR007823 InterPro:IPR023576 Pfam:PF05148 PROSITE:PS01184 GO:GO:0005886 GO:GO:0005737 GO:GO:0005730 GO:GO:0042149 GO:GO:0008168 GO:GO:0032259 GO:GO:0000183 GO:GO:0072332 GO:GO:0005677 GO:GO:0033553 GO:GO:0071158 GO:GO:0046015 OrthoDB:EOG7PGDRQ PANTHER:PTHR12787 GeneTree:ENSGT00390000006189 OMA:LMGTNIR TreeFam:TF313749 EMBL:DAAA02040853 Ensembl:ENSBTAT00000039795 NextBio:20878492 Uniprot:E1BJI1) HSP 1 Score: 95.5153 bits (236), Expect = 1.983e-22 Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 ++ S VV D G+ L S R P FD +L+ VT CDM++ PL S+D+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QRPASLVVADFGCGDC----RLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESIDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRT 403
BLAST of EMLSAG00000006366 vs. C. finmarchicus
Match: gi|592910414|gb|GAXK01047961.1| (TSA: Calanus finmarchicus comp75017_c1_seq1 transcribed RNA sequence) HSP 1 Score: 101.293 bits (251), Expect = 1.116e-24 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFR 97 +R + V+ D GEA L R + + +V SFD +A N VT CDM+ PL ++VD+ VFC +LMGTN +D+L EA R+LK+ GTLKIAE+ESRF+ Sbjct: 1186 LRLDDKAVIADFGCGEARLARSV--ENKVHSFDLVAANETVTACDMAYVPLEDNTVDVTVFCLALMGTNTRDFLFEATRVLKVGGTLKIAELESRFQ 1470
BLAST of EMLSAG00000006366 vs. C. finmarchicus
Match: gi|592899789|gb|GAXK01058586.1| (TSA: Calanus finmarchicus comp588346_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 1.422e+0 Identity = 14/42 (33.33%), Postives = 24/42 (57.14%), Query Frame = 0 Query: 48 KTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKI 89 K + SSVD+V C +L ++++ E +R+L GTL + Sbjct: 377 KIEVEDSSVDLVTVCQALHWMEVEEFYAEVSRVLVPGGTLAV 502
BLAST of EMLSAG00000006366 vs. C. finmarchicus
Match: gi|592816909|gb|GAXK01137659.1| (TSA: Calanus finmarchicus comp424073_c0_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 3.139e+0 Identity = 20/71 (28.17%), Postives = 34/71 (47.89%), Query Frame = 0 Query: 57 DIVVFCFSLMGTNLKDYLKE-----ANRILKLNGTLKIAEVESRFRDTTTGKFKAGMMTTLFMCTLIPNEQ 122 ++VV+C S KD + NR+ LNG+L+ + S T G+F M T+++ C+ I + Sbjct: 2985 NLVVYCQSEKFKGFKDSERLDSPLIPNRVRHLNGSLENSPSGSLSSLHTIGRFGDAMSTSIYKCSSIQESE 3197
BLAST of EMLSAG00000006366 vs. C. finmarchicus
Match: gi|592816910|gb|GAXK01137658.1| (TSA: Calanus finmarchicus comp424073_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 3.162e+0 Identity = 20/71 (28.17%), Postives = 34/71 (47.89%), Query Frame = 0 Query: 57 DIVVFCFSLMGTNLKDYLKE-----ANRILKLNGTLKIAEVESRFRDTTTGKFKAGMMTTLFMCTLIPNEQ 122 ++VV+C S KD + NR+ LNG+L+ + S T G+F M T+++ C+ I + Sbjct: 4429 NLVVYCQSEKFKGFKDSERLDSPLIPNRVRHLNGSLENSPSGSLSSLHTIGRFGDAMSTSIYKCSSIQESE 4641
BLAST of EMLSAG00000006366 vs. L. salmonis peptides
Match: EMLSAP00000006366 (pep:novel supercontig:LSalAtl2s:LSalAtl2s348:317886:318555:-1 gene:EMLSAG00000006366 transcript:EMLSAT00000006366 description:"snap_masked-LSalAtl2s348-processed-gene-2.9") HSP 1 Score: 268.085 bits (684), Expect = 2.644e-93 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKFKAGMMTTLFMCTLIPNEQVIWPNCC 129 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKFKAGMMTTLFMCTLIPNEQVIWPNCC Sbjct: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKFKAGMMTTLFMCTLIPNEQVIWPNCC 129
BLAST of EMLSAG00000006366 vs. L. salmonis peptides
Match: EMLSAP00000001799 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1306:71463:75771:1 gene:EMLSAG00000001799 transcript:EMLSAT00000001799 description:"maker-LSalAtl2s1306-augustus-gene-0.34") HSP 1 Score: 169.088 bits (427), Expect = 8.280e-52 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKF 104 MRKSES VVVDM GEA L RLLPSQYRV SFDFIALNTHVTPCDMSKTPLVSSSVD+VVFC SLMGTNLKDYL+EANRILK+NGTLKIAEVESRFR+TT KF Sbjct: 188 MRKSESAVVVDMGCGEARLARLLPSQYRVHSFDFIALNTHVTPCDMSKTPLVSSSVDVVVFCLSLMGTNLKDYLREANRILKVNGTLKIAEVESRFRETTPEKF 291
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|74958436|sp|O44410.1|RRP8_CAEEL (RecName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 102.834 bits (255), Expect = 4.424e-26 Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 K + V D+ GEA + + ++++ SFD +A+N V CDMSK P SS DIV++C SLMGTNL D+++EA R+LK+ G LKIAEV SRF Sbjct: 194 KPDQQSVFDLGCGEAKIAEAVGEKHKIRSFDLVAVNDRVESCDMSKLPAEDSSADIVIYCLSLMGTNLYDFIREARRVLKIGGILKIAEVTSRF 287
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|281312447|sp|A8XI07.1|RRP8_CAEBR (RecName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 98.9821 bits (245), Expect = 1.112e-24 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 K + V D+ GEA + + ++ + SFD +A+N V CDMSK P S D+V+FC SLMGTNL D++KEA R+L+ G LKI EV SRF Sbjct: 183 KPDKQAVFDLGCGEAKIAEAVGEKHTIRSFDLVAVNDRVESCDMSKLPAEDGSADVVIFCLSLMGTNLYDFIKEARRVLRTGGVLKIGEVTSRF 276
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|62900115|sp|Q5U4F0.1|RRP8_RAT (RecName: Full=Ribosomal RNA-processing protein 8; AltName: Full=Cerebral protein 1 homolog) HSP 1 Score: 97.8265 bits (242), Expect = 7.297e-24 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 +K S VV D G+ L S R P FD AL+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QKPASLVVADFGCGDC----RLASSVRNPVHCFDLAALDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDIRT 403
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|62900376|sp|Q9DB85.1|RRP8_MOUSE (RecName: Full=Ribosomal RNA-processing protein 8; AltName: Full=Cerebral protein 1 homolog) HSP 1 Score: 97.4413 bits (241), Expect = 1.089e-23 Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 +K S VV D G+ L S R P FD +L+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 306 QKPASLVVADFGCGDC----RLASSVRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKTGGLLKVAEVSSRFEDIRT 403
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|62900343|sp|O43159.2|RRP8_HUMAN (RecName: Full=Ribosomal RNA-processing protein 8; AltName: Full=Cerebral protein 1; AltName: Full=Nucleomethylin) HSP 1 Score: 95.9005 bits (237), Expect = 3.672e-23 Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVP--SFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 ++ S VV D G+ L S R P FD +L+ VT CDM++ PL SVD+ VFC SLMGTN++D+L+EANR+LK G LK+AEV SRF D T Sbjct: 305 QRPASLVVADFGCGDC----RLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRT 402
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|74850884|sp|Q54CP1.1|RRP8_DICDI (RecName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 94.7449 bits (234), Expect = 6.848e-23 Identity = 45/90 (50.00%), Postives = 59/90 (65.56%), Query Frame = 0 Query: 9 VVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 + D+ GEA L L ++ + SFD +A+N VT CD+S PL + S+DI VFC SLMGTN D++ EA R+L G LKIAE+ESR D Sbjct: 232 IADLGCGEAKLAERLQHKHTIQSFDLVAVNERVTACDISNLPLKNESIDIAVFCLSLMGTNFIDFIIEAERVLVKGGLLKIAEIESRITD 321
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|1723441|sp|Q10257.1|RRP8_SCHPO (RecName: Full=25S rRNA (adenine(645)-N(1))-methyltransferase; AltName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 93.2041 bits (230), Expect = 1.038e-22 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLL--PSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTT 100 +K + V+ D+ GEA + +V SFD +A N HV CD++ P+ +VDI VFC SLMGTN + +LKEA RILK+ G L +AE++SRF D + Sbjct: 164 KKKNNIVIADLGCGEAKIASTFRKSRSLQVHSFDLVAPNEHVVACDIANVPMADETVDIAVFCLSLMGTNWQSFLKEAYRILKVGGLLWVAEIKSRFSDKS 264
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|75146626|sp|Q84JC0.1|RRP8_ARATH (RecName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 90.8929 bits (224), Expect = 6.493e-22 Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTG 102 + S S VV D G+A + + + + +V SFD ++ N V CDMS T L SSSVD+ VFC SLMGTN Y+KEA+R+L+ +G L IAEV+SRF G Sbjct: 130 LSNSSSLVVADFGCGDARIAKSV--KNKVFSFDLVSKNPSVIACDMSNTSLESSSVDVAVFCLSLMGTNYSSYIKEAHRVLRPSGMLLIAEVKSRFDPNNGG 229
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|122102820|sp|Q7K2B0.1|RRP8_DROME (RecName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 85.1149 bits (209), Expect = 1.824e-19 Identity = 38/92 (41.30%), Postives = 64/92 (69.57%), Query Frame = 0 Query: 7 TVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 ++ D GE L + +P+ +V S D +A + + C+++ TPL + ++D+ V+C SLMGT+L ++ EANR+LKL+GT+ IAE++SRF+D Sbjct: 214 AIIGDFGCGEGKLAQSVPN--KVYSMDLVAARSDIIACNITDTPLQARTLDVAVYCLSLMGTDLNEFFLEANRVLKLHGTVYIAEIQSRFQD 303
BLAST of EMLSAG00000006366 vs. SwissProt
Match: gi|118595830|sp|P38961.2|RRP8_YEAST (RecName: Full=25S rRNA (adenine(645)-N(1))-methyltransferase; AltName: Full=Ribosomal RNA-processing protein 8) HSP 1 Score: 80.1073 bits (196), Expect = 1.476e-17 Identity = 46/119 (38.66%), Postives = 62/119 (52.10%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILV---------------RLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKF 104 ++ S+ V+ DM GEA L + L +++V SFD N +T D+ PL S IVVFC +LMGTN D++KEA RIL G L IAE++SRF D +F Sbjct: 195 LKDSKEIVIADMGCGEAQLALEINNFFKNYNKKAKKYLKRRHKVHSFDLKKANERITVADIRNVPLPDESCTIVVFCLALMGTNFLDFIKEAYRILAPRGELWIAEIKSRFSDGKGNEF 313
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: XP_001120291.4 (PREDICTED: ribosomal RNA-processing protein 8 [Apis mellifera]) HSP 1 Score: 112.079 bits (279), Expect = 3.822e-31 Identity = 55/89 (61.80%), Postives = 70/89 (78.65%), Query Frame = 0 Query: 8 VVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 ++ D GEA L +P+ +V SFDFI+LN +VT CD++ TPL++S VD+VVFC SLMGTNLKDY+ EANR+LK +G LKIAEVESRF Sbjct: 70 IIADFGCGEARLAATVPN--KVHSFDFISLNENVTACDITHTPLLTSGVDVVVFCLSLMGTNLKDYIIEANRVLKKDGILKIAEVESRF 156
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: gb|EEC08467.1| (conserved hypothetical protein, partial [Ixodes scapularis]) HSP 1 Score: 105.145 bits (261), Expect = 1.891e-29 Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 0 Query: 6 STVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 +TV+ D+ GEA + R L ++ +V SFD ALN VT CDMS+ PL +VD+ VFC SLMGTNL ++ EANRILK G LKIAEV+SRFR+ Sbjct: 4 TTVIADLGCGEAKIARTL-TKKKVHSFDLKALNDQVTVCDMSRLPLYRQTVDVAVFCLSLMGTNLNAFILEANRILKKGGLLKIAEVKSRFRN 95
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: EAA05263.3 (AGAP011327-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 93.9745 bits (232), Expect = 4.744e-23 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 0 Query: 5 ESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 + T++ D GEA L +P+ +V S D +A + V CDM+ TPL S+ V++VVFC SLMGTNL D+L EANR+LK+ G +KIAEV SRF + Sbjct: 209 KDTIIADFGCGEAKLAASVPN--KVYSLDLVANHNGVIACDMANTPLESNFVNVVVFCLSLMGTNLVDFLLEANRVLKVGGIMKIAEVASRFEN 300
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: gb|EEZ97827.2| (Ribosomal RNA-processing protein 8-like Protein [Tribolium castaneum]) HSP 1 Score: 93.5893 bits (231), Expect = 5.221e-23 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 0 Query: 5 ESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAE 91 ++ VV D G+A L + + + +V SFD +A N VT CDM+ PL ++SVD+VVFC SLMGTNL DYL EANR+L L G LKIAE Sbjct: 243 KTHVVADFGCGDAKLAQSI--KQKVHSFDLVATNEAVTACDMAHVPLENNSVDVVVFCLSLMGTNLHDYLLEANRVLVLGGILKIAE 327
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: EEB14057.1 (Cerebral protein, putative [Pediculus humanus corporis]) HSP 1 Score: 88.9669 bits (219), Expect = 4.919e-22 Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0 Query: 2 RKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 + ++ ++ D G+A + + S+ V SFD ++L+ VT CDM+ TPL +DI VFC SLMGTN +YL EANR+LK+ G L IAEV+SRF Sbjct: 67 KNNKKLIIGDFGCGDAKIAKTF-SELTVHSFDLVSLDPCVTVCDMASTPLSDEVLDIAVFCLSLMGTNFSEYLVEANRVLKVGGQLLIAEVQSRF 160
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: AAF57594.1 (CG7137 [Drosophila melanogaster]) HSP 1 Score: 85.1149 bits (209), Expect = 8.840e-20 Identity = 38/92 (41.30%), Postives = 64/92 (69.57%), Query Frame = 0 Query: 7 TVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 ++ D GE L + +P+ +V S D +A + + C+++ TPL + ++D+ V+C SLMGT+L ++ EANR+LKL+GT+ IAE++SRF+D Sbjct: 214 AIIGDFGCGEGKLAQSVPN--KVYSMDLVAARSDIIACNITDTPLQARTLDVAVYCLSLMGTDLNEFFLEANRVLKLHGTVYIAEIQSRFQD 303
BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Match: gb|KPM02614.1| (ribosomal RNA-processing protein 8-like protein [Sarcoptes scabiei]) HSP 1 Score: 52.7582 bits (125), Expect = 2.857e-8 Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 0 Query: 31 SFDFIA---LNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 SFD + + + DM PL + D ++ SLM +NL D +EANRILK NG + I EV SRF + Sbjct: 243 SFDLYSSKDFSNIIIAADMCCLPLEDNFCDYCIYSLSLMPSNLSDAFREANRILKPNGCIMIVEVASRFAE 313
BLAST of EMLSAG00000006366 vs. nr
Match: gi|861652036|gb|KMQ98106.1| (ribosomal rna-processing protein 8-like protein [Lasius niger]) HSP 1 Score: 116.701 bits (291), Expect = 9.519e-30 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 0 Query: 6 STVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 V+ D GEA+L +P ++V SFDFIALN V CDM+ TPL+ +SV +VVFC SLMG+NL DY+ EANR+LK NGTLKIAEVESRF D T Sbjct: 114 DNVIADFGCGEALLAASIP--HKVHSFDFIALNDRVKACDMAHTPLLMNSVQVVVFCLSLMGSNLTDYIIEANRVLKNNGTLKIAEVESRFEDVTN 207
BLAST of EMLSAG00000006366 vs. nr
Match: gi|307167247|gb|EFN60935.1| (Cerebral protein 1-like protein [Camponotus floridanus]) HSP 1 Score: 114.005 bits (284), Expect = 3.286e-29 Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 0 Query: 7 TVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTT 101 V+ D GEA+L +P ++V SFDFIA+N V CDM+ TPL+++SV +VVFC SLMG+NL DY+ EANR+LK NGTLKIAEVESRF + T Sbjct: 68 NVIADFGCGEALLAASVP--HKVHSFDFIAVNDTVKACDMAHTPLLTNSVHVVVFCLSLMGSNLSDYIIEANRVLKNNGTLKIAEVESRFENVTN 160
BLAST of EMLSAG00000006366 vs. nr
Match: gi|307195275|gb|EFN77231.1| (Cerebral protein 1-like protein [Harpegnathos saltator]) HSP 1 Score: 114.005 bits (284), Expect = 4.227e-29 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0 Query: 4 SESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 S +++ D GEA L +P ++V SFDFIALN V CD+ TPL+ +S+ +VVFC SLMGTNLKDYL EANR+LK+NG LKIAEVESRF D Sbjct: 66 STDSIIADFGCGEAQLAASVP--HKVYSFDFIALNDRVKACDIIHTPLLMNSIHVVVFCLSLMGTNLKDYLIEANRVLKINGILKIAEVESRFED 158
BLAST of EMLSAG00000006366 vs. nr
Match: gi|759069980|ref|XP_011344552.1| (PREDICTED: ribosomal RNA-processing protein 8 [Cerapachys biroi] >gi|759069982|ref|XP_011344553.1| PREDICTED: ribosomal RNA-processing protein 8 [Cerapachys biroi]) HSP 1 Score: 115.161 bits (287), Expect = 5.553e-29 Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0 Query: 6 STVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 + V+ D GEA L +P ++V SFDF+ALN V CDM+ TPL++ SVD+VVFC SLMGTNL DY+ EANR+LK NG LKIAEVESRF + Sbjct: 122 TNVIADFGCGEARLAVSVP--HKVHSFDFVALNDKVQACDMAHTPLLAHSVDVVVFCLSLMGTNLNDYITEANRVLKNNGILKIAEVESRFEN 212
BLAST of EMLSAG00000006366 vs. nr
Match: gi|749794268|ref|XP_011150460.1| (PREDICTED: ribosomal RNA-processing protein 8 [Harpegnathos saltator]) HSP 1 Score: 114.39 bits (285), Expect = 1.001e-28 Identity = 57/95 (60.00%), Postives = 70/95 (73.68%), Query Frame = 0 Query: 4 SESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 S +++ D GEA L +P ++V SFDFIALN V CD+ TPL+ +S+ +VVFC SLMGTNLKDYL EANR+LK+NG LKIAEVESRF D Sbjct: 124 STDSIIADFGCGEAQLAASVP--HKVYSFDFIALNDRVKACDIIHTPLLMNSIHVVVFCLSLMGTNLKDYLIEANRVLKINGILKIAEVESRFED 216
BLAST of EMLSAG00000006366 vs. nr
Match: gi|1058217512|gb|JAT12272.1| (hypothetical protein g.11657 [Graphocephala atropunctata]) HSP 1 Score: 115.546 bits (288), Expect = 1.796e-28 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 KS + VV D GEA L + LP V S D +ALN VT CDM+ TPL SSVD+VVFC SLMGTN+ DY++EANR+LK NG +KIAE+ESRF D Sbjct: 208 KSGNLVVADFGCGEAQLAQQLPCT--VHSLDLVALNQRVTVCDMAHTPLADSSVDVVVFCLSLMGTNILDYIREANRVLKENGVMKIAEIESRFED 301
BLAST of EMLSAG00000006366 vs. nr
Match: gi|1032023194|ref|XP_001120291.4| (PREDICTED: ribosomal RNA-processing protein 8 [Apis mellifera]) HSP 1 Score: 112.079 bits (279), Expect = 1.870e-28 Identity = 55/89 (61.80%), Postives = 70/89 (78.65%), Query Frame = 0 Query: 8 VVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 ++ D GEA L +P+ +V SFDFI+LN +VT CD++ TPL++S VD+VVFC SLMGTNLKDY+ EANR+LK +G LKIAEVESRF Sbjct: 70 IIADFGCGEARLAATVPN--KVHSFDFISLNENVTACDITHTPLLTSGVDVVVFCLSLMGTNLKDYIIEANRVLKKDGILKIAEVESRF 156
BLAST of EMLSAG00000006366 vs. nr
Match: gi|1035596053|ref|XP_016905382.1| (PREDICTED: ribosomal RNA-processing protein 8 [Apis cerana]) HSP 1 Score: 112.079 bits (279), Expect = 2.247e-28 Identity = 54/89 (60.67%), Postives = 70/89 (78.65%), Query Frame = 0 Query: 8 VVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRF 96 ++ D GEA L +P ++V SFDFI+LN +VT CD++ TPL++S +D+VVFC SLMGTNLKDY+ EANR+LK +G LKIAEVESRF Sbjct: 70 IIADFGCGEARLAATVP--HKVHSFDFISLNKNVTACDVAHTPLLTSRIDVVVFCLSLMGTNLKDYIIEANRVLKKDGILKIAEVESRF 156
BLAST of EMLSAG00000006366 vs. nr
Match: gi|572318564|ref|XP_006624853.1| (PREDICTED: ribosomal RNA-processing protein 8-like [Apis dorsata]) HSP 1 Score: 111.694 bits (278), Expect = 2.642e-28 Identity = 55/90 (61.11%), Postives = 70/90 (77.78%), Query Frame = 0 Query: 8 VVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFR 97 ++ D GEA L +P ++V SFDFI+LN +VT CD++ TPL++S V+IVVFC SLMGTNLKDY+ EANR+LK +G LKIAEVESRF Sbjct: 70 IIADFGCGEARLAATVP--HKVHSFDFISLNKNVTACDIAHTPLLTSGVNIVVFCLSLMGTNLKDYIIEANRVLKKDGILKIAEVESRFE 157
BLAST of EMLSAG00000006366 vs. nr
Match: gi|1058208396|gb|JAT07714.1| (hypothetical protein g.11655, partial [Graphocephala atropunctata]) HSP 1 Score: 115.546 bits (288), Expect = 3.248e-28 Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0 Query: 3 KSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRD 98 KS + VV D GEA L + LP V S D +ALN VT CDM+ TPL SSVD+VVFC SLMGTN+ DY++EANR+LK NG +KIAE+ESRF D Sbjct: 244 KSGNLVVADFGCGEAQLAQQLPCT--VHSLDLVALNQRVTVCDMAHTPLADSSVDVVVFCLSLMGTNILDYIREANRVLKENGVMKIAEIESRFED 337
BLAST of EMLSAG00000006366 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold143_size313727-snap-gene-1.18 (protein:Tk09408 transcript:maker-scaffold143_size313727-snap-gene-1.18-mRNA-1 annotation:"ribosomal rna-processing protein") HSP 1 Score: 119.783 bits (299), Expect = 6.451e-33 Identity = 62/106 (58.49%), Postives = 75/106 (70.75%), Query Frame = 0 Query: 1 MRKSESTVVVDMVYGEAILVRLLPSQYRVPSFDFIALNTHVTPCDMSKTPLVSSSVDIVVFCFSLMGTNLKDYLKEANRILKLNGTLKIAEVESRFRDTTTGKFKA 106 ++KS + VV D GEA L + LP +V SFD +A N VT CDM+ TPL + S+DIVVFC SLMG NLKDYLKEANR+LK G++KIAEVESRF + KF A Sbjct: 284 LKKSGNPVVADFGCGEARLAKALPG-LKVHSFDLVASNALVTACDMAHTPLGAESMDIVVFCLSLMGINLKDYLKEANRVLKKGGSMKIAEVESRFAEIPVDKFVA 388 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006366 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000006366 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000006366 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000006366 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 11
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BLAST of EMLSAG00000006366 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 7
BLAST of EMLSAG00000006366 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000006366 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s348:317886..318555- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006366-689132 ID=EMLSAG00000006366-689132|Name=EMLSAG00000006366|organism=Lepeophtheirus salmonis|type=gene|length=670bp|location=Sequence derived from alignment at LSalAtl2s348:317886..318555- (Lepeophtheirus salmonis)back to top Add to Basket
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