EMLSAG00000006893, EMLSAG00000006893-689659 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752809|gb|GAXK01201604.1| (TSA: Calanus finmarchicus comp86589_c0_seq8 transcribed RNA sequence) HSP 1 Score: 71.633 bits (174), Expect = 2.412e-14 Identity = 68/206 (33.01%), Postives = 97/206 (47.09%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGS----LQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 FNK+ M + I +K+ + +M Q K+KT S LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S ISCLL Sbjct: 84 FNKKKMGQAISKKKEKQ--------KREPLMTQMKNKTTDSSPSPRLQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQSCAAQN-ISCLL 650
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752811|gb|GAXK01201602.1| (TSA: Calanus finmarchicus comp86589_c0_seq6 transcribed RNA sequence) HSP 1 Score: 72.4034 bits (176), Expect = 3.819e-14 Identity = 67/204 (32.84%), Postives = 98/204 (48.04%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGS----LQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISC 198 FNK+ M + I +K+ + +M Q K+KT S LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S V ++ISC Sbjct: 419 FNKKKMGQAISKKKEKQ--------KREPLMTQMKNKTTDSSPSPRLQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQS-CVAQIISC 979
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752815|gb|GAXK01201598.1| (TSA: Calanus finmarchicus comp86589_c0_seq2 transcribed RNA sequence) HSP 1 Score: 72.4034 bits (176), Expect = 5.775e-14 Identity = 67/204 (32.84%), Postives = 98/204 (48.04%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGS----LQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISC 198 FNK+ M + I +K+ + +M Q K+KT S LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S V ++ISC Sbjct: 419 FNKKKMGQAISKKKEKQ--------KREPLMTQMKNKTTDSSPSPRLQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQS-CVAQIISC 979
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752812|gb|GAXK01201601.1| (TSA: Calanus finmarchicus comp86589_c0_seq5 transcribed RNA sequence) HSP 1 Score: 71.633 bits (174), Expect = 6.239e-14 Identity = 68/206 (33.01%), Postives = 98/206 (47.57%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGS----LQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 FNK+ M + I +K+ + +M Q K+KT S LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF + L L N+ LW CA + S++R++ + KAHD L LD++ FL S ISCLL Sbjct: 84 FNKKKMGQAISKKKEKQ--------KREPLMTQMKNKTTDSSPSPRLQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYFRQ-PGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQSCAAQN-ISCLL 650
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752813|gb|GAXK01201600.1| (TSA: Calanus finmarchicus comp86589_c0_seq4 transcribed RNA sequence) HSP 1 Score: 66.6254 bits (161), Expect = 4.038e-12 Identity = 66/213 (30.99%), Postives = 101/213 (47.42%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNR-------VLLESTSYSS------NVIMGQRKSKTRRGSLQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISC 198 FNK+ M + I +K+ + + T++S + + Q S + R LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S V ++ISC Sbjct: 419 FNKKKMGQAISKKKEKQKREPLMTQMKNKTTFSYILESILQISIFQDSSPSPR--LQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQS-CVAQIISC 1024
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752816|gb|GAXK01201597.1| (TSA: Calanus finmarchicus comp86589_c0_seq1 transcribed RNA sequence) HSP 1 Score: 66.6254 bits (161), Expect = 4.111e-12 Identity = 53/155 (34.19%), Postives = 77/155 (49.68%), Query Frame = 0 Query: 52 RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISC 198 RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S V ++ISC Sbjct: 419 RSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQSC-VAQIISC 856
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752810|gb|GAXK01201603.1| (TSA: Calanus finmarchicus comp86589_c0_seq7 transcribed RNA sequence) HSP 1 Score: 65.4698 bits (158), Expect = 4.649e-12 Identity = 67/215 (31.16%), Postives = 100/215 (46.51%), Query Frame = 0 Query: 8 FNKENMEENIKRKRGNR-------VLLESTSYSS------NVIMGQRKSKTRRGSLQ-RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 FNK+ M + I +K+ + + T++S + + Q S + R LQ RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S ISCLL Sbjct: 84 FNKKKMGQAISKKKEKQKREPLMTQMKNKTTFSYILESILQISIFQDSSPSPR--LQGRSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQSCAAQN-ISCLL 695
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592752814|gb|GAXK01201599.1| (TSA: Calanus finmarchicus comp86589_c0_seq3 transcribed RNA sequence) HSP 1 Score: 65.855 bits (159), Expect = 5.531e-12 Identity = 54/157 (34.39%), Postives = 76/157 (48.41%), Query Frame = 0 Query: 52 RSRPSTPPNTLENILSSTERTEEFKEFLHSLDEEC---EEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLS-----PIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 RS PS PP L + L S T+EF FL+ +D+ EEE R L+F+L RDL + + K L+++I + YF L L N+ LW CA + S++R++ + KAHD L LD++ FL S ISCLL Sbjct: 84 RSSPSPPPRGLHSTLDSPTTTKEFLIFLNQMDQATMMDEEECGRAGSLEFVLKVRDLESAPDTH-----KESLMKQIGEKYF-RQPGEGLVLDNNELWTRCA--DSCSEIRMTHQGIEHLKKAHDHCLAELDEMHLLFLQQRRDQSCAAQN-ISCLL 527
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592915934|gb|GAXK01042441.1| (TSA: Calanus finmarchicus comp212412_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 1.535e-2 Identity = 49/174 (28.16%), Postives = 75/174 (43.10%), Query Frame = 0 Query: 58 PPNTLENILSSTERTEE--------FKEFL-HSLDEECEEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRR----------LLREIQDIYFVENSSHRLNLSNDALWRECAR-----FQTSSDLRLSP----IWKAHDD--VLK-NLDDISRHFLSMHPLSSPRVHEVISCLL 200 PP L ++ TEE F++FL H + E LDF+ LS L+AV+ + ++ K++ LLR++ D YF S + LSN L E + SS+ + +W+A +D V K LD + FL+ P SP V V+ +L Sbjct: 681 PPRDLSGLIEEMLVTEEESSLWGAHFRQFLRHRGQTDLETA------LDFVTLSTKLNAVQEEAKNSDSKKKREDLRQDRVSLLRQMGDKYFKAESEDSIPLSNQVLHEELTETLAKVTEKSSEAEVEEACELVWQARNDNRVWKAGLDTSYKTFLANKP--SPTVKAVLLSIL 1178
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Match: gi|592759315|gb|GAXK01195098.1| (TSA: Calanus finmarchicus comp88570_c2_seq19 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 6.824e-1 Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 0 Query: 147 RECARFQTSSDLRLSPIWKAHDDVLKNLDDISRHFLSM 184 ++C RF T+ D + PIWK H+ LK+L+ R LS+ Sbjct: 53 KDC-RFGTNQDFK-QPIWKGHESSLKDLEHPLRPILSL 160
BLAST of EMLSAG00000006893 vs. L. salmonis peptides
Match: EMLSAP00000006893 (pep:novel supercontig:LSalAtl2s:LSalAtl2s390:251057:260211:1 gene:EMLSAG00000006893 transcript:EMLSAT00000006893 description:"maker-LSalAtl2s390-augustus-gene-2.7") HSP 1 Score: 403.29 bits (1035), Expect = 3.409e-144 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0 Query: 1 MLFNIKVFNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGSLQRSRPSTPPNTLENILSSTERTEEFKEFLHSLDEECEEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLSPIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 MLFNIKVFNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGSLQRSRPSTPPNTLENILSSTERTEEFKEFLHSLDEECEEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLSPIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL Sbjct: 1 MLFNIKVFNKENMEENIKRKRGNRVLLESTSYSSNVIMGQRKSKTRRGSLQRSRPSTPPNTLENILSSTERTEEFKEFLHSLDEECEEETLRVDWLDFLLLSRDLHAVESSSSSAGLKRRLLREIQDIYFVENSSHRLNLSNDALWRECARFQTSSDLRLSPIWKAHDDVLKNLDDISRHFLSMHPLSSPRVHEVISCLL 200 The following BLAST results are available for this feature:
BLAST of EMLSAG00000006893 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000006893 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 12
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BLAST of EMLSAG00000006893 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000006893 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000006893 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000006893 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000006893 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s390:251057..260211+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000006893-689659 ID=EMLSAG00000006893-689659|Name=EMLSAG00000006893|organism=Lepeophtheirus salmonis|type=gene|length=9155bp|location=Sequence derived from alignment at LSalAtl2s390:251057..260211+ (Lepeophtheirus salmonis)back to top Add to Basket
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