EMLSAG00000007437, EMLSAG00000007437-690203 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592899805|gb|GAXK01058570.1| (TSA: Calanus finmarchicus comp588702_c0_seq4 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 1.802e-3 Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 136 ADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 ADPEGPG+ A++LT SFLL L+T+PFSLC+ VK Sbjct: 922 ADPEGPGIIALILTAFSFLLFLVTIPFSLCMCVK 1023
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592899807|gb|GAXK01058568.1| (TSA: Calanus finmarchicus comp588702_c0_seq2 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 1.845e-3 Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 136 ADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 ADPEGPG+ A++LT SFLL L+T+PFSLC+ VK Sbjct: 1064 ADPEGPGIIALILTAFSFLLFLVTIPFSLCMCVK 1165
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592899799|gb|GAXK01058576.1| (TSA: Calanus finmarchicus comp588702_c0_seq10 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.998e-3 Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 136 ADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 ADPEGPG+ A++LT SFLL L+T+PFSLC+ VK Sbjct: 31 ADPEGPGIIALILTAFSFLLFLVTIPFSLCMCVK 132
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868433|gb|GAXK01089129.1| (TSA: Calanus finmarchicus comp317562_c1_seq52 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.437e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868440|gb|GAXK01089122.1| (TSA: Calanus finmarchicus comp317562_c1_seq45 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.567e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868445|gb|GAXK01089117.1| (TSA: Calanus finmarchicus comp317562_c1_seq40 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.632e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868452|gb|GAXK01089110.1| (TSA: Calanus finmarchicus comp317562_c1_seq33 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.671e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868455|gb|GAXK01089107.1| (TSA: Calanus finmarchicus comp317562_c1_seq30 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.704e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868457|gb|GAXK01089105.1| (TSA: Calanus finmarchicus comp317562_c1_seq28 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.722e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Match: gi|592868459|gb|GAXK01089103.1| (TSA: Calanus finmarchicus comp317562_c1_seq26 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 2.731e-2 Identity = 21/45 (46.67%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 125 DYVNDQGRLAHADPEGPGLCAMXXXXXXXXXXXITMPFSLCVTVK 169 D ++ QG+ A EG G+C +LT +S+L+V++T+PFSLCV K Sbjct: 116 DLMDFQGKGADDTDEGIGMCGWILTAISWLIVIVTLPFSLCVCFK 250
BLAST of EMLSAG00000007437 vs. L. salmonis peptides
Match: EMLSAP00000007437 (pep:novel supercontig:LSalAtl2s:LSalAtl2s423:91317:114729:-1 gene:EMLSAG00000007437 transcript:EMLSAT00000007437 description:"maker-LSalAtl2s423-augustus-gene-1.8") HSP 1 Score: 341.658 bits (875), Expect = 5.835e-121 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 Query: 2 PRRRNGRGDLYLDHQHAFQGQNQASVNNQRESSFTNPELLPHPAPNLPHPSTSSIQSDGSPVNPTTMQSSITNNQLTSNGGNNGNAPPIKLPRIVVPIPRTQHVYAPMAPLGALSLGLTKNKKDYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 PRRRNGRGDLYLDHQHAFQGQNQASVNNQRESSFTNPELLPHPAPNLPHPSTSSIQSDGSPVNPTTMQSSITNNQLTSNGGNNGNAPPIKLPRIVVPIPRTQHVYAPMAPLGALSLGLTKNKKDYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK Sbjct: 2 PRRRNGRGDLYLDHQHAFQGQNQASVNNQRESSFTNPELLPHPAPNLPHPSTSSIQSDGSPVNPTTMQSSITNNQLTSNGGNNGNAPPIKLPRIVVPIPRTQHVYAPMAPLGALSLGLTKNKKDYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169
BLAST of EMLSAG00000007437 vs. L. salmonis peptides
Match: EMLSAP00000006590 (pep:novel supercontig:LSalAtl2s:LSalAtl2s362:268152:296741:-1 gene:EMLSAG00000006590 transcript:EMLSAT00000006590 description:"maker-LSalAtl2s362-augustus-gene-2.10") HSP 1 Score: 54.299 bits (129), Expect = 1.557e-9 Identity = 22/33 (66.67%), Postives = 29/33 (87.88%), Query Frame = 0 Query: 137 DPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 DPEGPG+ A LLT +SFLL++IT+PFSLC+ +K Sbjct: 72 DPEGPGIAAFLLTALSFLLIVITVPFSLCLCIK 104
BLAST of EMLSAG00000007437 vs. Select Arthropod Genomes
Match: EFX85897.1 (hypothetical protein DAPPUDRAFT_193650 [Daphnia pulex]) HSP 1 Score: 55.4546 bits (132), Expect = 9.841e-9 Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0 Query: 132 RLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 R + ADP GPG+CA +LTL SFLL+L T P SLC +VK Sbjct: 68 RGSAADPGGPGICAFILTLFSFLLILATFPLSLCFSVK 105
BLAST of EMLSAG00000007437 vs. nr
Match: gi|942413061|gb|JAN88460.1| (Erythrocyte band 7 integral membrane protein [Daphnia magna]) HSP 1 Score: 62.3882 bits (150), Expect = 2.331e-8 Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 0 Query: 121 KNKKDYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 KN + + ND + ADP GPG+CA +LTL SFLL+L T P SLC +VK Sbjct: 104 KNMQRWRNDNIDIGKADPGGPGICAFILTLFSFLLILATFPLSLCFSVK 152
BLAST of EMLSAG00000007437 vs. nr
Match: gi|1022746366|gb|KZS00347.1| (Band 7 protein, partial [Daphnia magna]) HSP 1 Score: 54.299 bits (129), Expect = 9.428e-7 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0 Query: 135 HADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 ADP GPG+CA +LTL SFLL+L T P SLC +VK Sbjct: 60 WADPGGPGICAFILTLFSFLLILATFPLSLCFSVK 94
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold21_size687808-snap-gene-2.10 (protein:Tk09835 transcript:maker-scaffold21_size687808-snap-gene-2.10-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_45422") HSP 1 Score: 86.2705 bits (212), Expect = 7.535e-21 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0 Query: 101 RTQHVYAPMAPLGALSLGLTKNKK---DYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 R QHVYAP+APLG L+LG+ ++ D + + ++AD EGPG+CA +LT VS +LVL+TMP SLCVTVK Sbjct: 30 RPQHVYAPVAPLGMLTLGVFSKRQVETDEEREIKKYSYADAEGPGICAAILTFVSLVLVLVTMPLSLCVTVK 101
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold21_size687808-snap-gene-4.10 (protein:Tk09838 transcript:maker-scaffold21_size687808-snap-gene-4.10-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_193650") HSP 1 Score: 67.781 bits (164), Expect = 4.513e-14 Identity = 28/34 (82.35%), Postives = 33/34 (97.06%), Query Frame = 0 Query: 136 ADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 ADPEGPG+CAMLLT ++F+LVL+TMPFSLCVTVK Sbjct: 121 ADPEGPGVCAMLLTFLAFILVLVTMPFSLCVTVK 154
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold271_size230452-snap-gene-1.12 (protein:Tk11458 transcript:maker-scaffold271_size230452-snap-gene-1.12-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_193650") HSP 1 Score: 55.0694 bits (131), Expect = 1.162e-9 Identity = 22/34 (64.71%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 136 ADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 ADPEGPGLCA++LT + LL++IT+PFSLC +K Sbjct: 94 ADPEGPGLCALILTAFAALLLVITLPFSLCTCIK 127
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold21_size687808-snap-gene-4.8 (protein:Tk09837 transcript:maker-scaffold21_size687808-snap-gene-4.8-mRNA-1 annotation:"band 7 protein cg42540-like") HSP 1 Score: 53.9138 bits (128), Expect = 3.171e-9 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 137 DPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 +PEG +CAMLLT S +LVL+T+PFSLCV+VK Sbjct: 203 EPEGADVCAMLLTAFSLVLVLVTLPFSLCVSVK 235
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold57_size444674-snap-gene-2.13 (protein:Tk04368 transcript:maker-scaffold57_size444674-snap-gene-2.13-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_193650") HSP 1 Score: 53.9138 bits (128), Expect = 3.292e-9 Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 0 Query: 136 ADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 ADPEGPG+ A LLT +S LL+ +TMPFSLC+ +K Sbjct: 154 ADPEGPGIAAFLLTALSVLLIAVTMPFSLCLCIK 187
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold661_size154698-snap-gene-0.16 (protein:Tk09487 transcript:maker-scaffold661_size154698-snap-gene-0.16-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_45422") HSP 1 Score: 51.6026 bits (122), Expect = 1.225e-8 Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0 Query: 139 EGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 EGPGLCA L+T +S LLV +T+PFSLC+ VK Sbjct: 3 EGPGLCAHLITFISILLVFVTIPFSLCLAVK 33
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold17_size721972-processed-gene-4.0 (protein:Tk09971 transcript:snap_masked-scaffold17_size721972-processed-gene-4.0-mRNA-1 annotation:"conserved hypothetical protein") HSP 1 Score: 47.7506 bits (112), Expect = 3.454e-7 Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0 Query: 122 NKKDYVNDQGRLAHADPEGPGLCAMLLTLVSFLLVLITMPFSLCVTVK 169 N+++Y D G A G GLC +LT +S+ LV++T+PFSLCV K Sbjct: 190 NEENY-GDAGVRADESDSGIGLCGWILTAISWGLVIVTLPFSLCVCFK 236 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007437 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000007437 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000007437 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000007437 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007437 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000007437 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000007437 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 7
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s423:91317..114729- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007437-690203 ID=EMLSAG00000007437-690203|Name=EMLSAG00000007437|organism=Lepeophtheirus salmonis|type=gene|length=23413bp|location=Sequence derived from alignment at LSalAtl2s423:91317..114729- (Lepeophtheirus salmonis)back to top Add to Basket
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