EMLSAG00000007812, EMLSAG00000007812-690578 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000007812 vs. C. finmarchicus
Match: gi|592870394|gb|GAXK01087168.1| (TSA: Calanus finmarchicus comp216100_c0_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 3.099e+0 Identity = 38/138 (27.54%), Postives = 64/138 (46.38%), Query Frame = 0 Query: 247 LLRKTLEASKSLGKINKILSQNSVLLSQYELLPQI---DSSKI--------QVNISVTKDSI-IKFDILNLLDSDLNGEFWFLKVLFTSHFSSEQFYQVFRLPQRLPRVEPWKVHSEIPEINKHPKYIPLSIHLFLVF 372 +L + +E SK++G + + ++ L Q + Q+ DS+K+ VN+ + S+ +KF N+ D L G+FW LK+ + SE+ Q +P V IP P+ +PLS+ LVF Sbjct: 2037 ILERIVEESKTIGTLGQATAEKQEHLQQLRIFQQLLLADSAKLFLTELCVAAVNMFSNQKSLQLKFK--NVSDFKLLGKFWSLKLDIS--LLSEKCTQSKTVPLPPSFSGQDTVSCHIPLAAMAPEELPLSVSSHLVF 2438
BLAST of EMLSAG00000007812 vs. C. finmarchicus
Match: gi|592870395|gb|GAXK01087167.1| (TSA: Calanus finmarchicus comp216100_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 3.255e+0 Identity = 38/138 (27.54%), Postives = 64/138 (46.38%), Query Frame = 0 Query: 247 LLRKTLEASKSLGKINKILSQNSVLLSQYELLPQI---DSSKI--------QVNISVTKDSI-IKFDILNLLDSDLNGEFWFLKVLFTSHFSSEQFYQVFRLPQRLPRVEPWKVHSEIPEINKHPKYIPLSIHLFLVF 372 +L + +E SK++G + + ++ L Q + Q+ DS+K+ VN+ + S+ +KF N+ D L G+FW LK+ + SE+ Q +P V IP P+ +PLS+ LVF Sbjct: 3677 ILERIVEESKTIGTLGQATAEKQEHLQQLRIFQQLLLADSAKLFLTELCVAAVNMFSNQKSLQLKFK--NVSDFKLLGKFWSLKLDIS--LLSEKCTQSKTVPLPPSFSGQDTVSCHIPLAAMAPEELPLSVSSHLVF 4078
BLAST of EMLSAG00000007812 vs. C. finmarchicus
Match: gi|592925610|gb|GAXK01032805.1| (TSA: Calanus finmarchicus comp314818_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 7.782e+0 Identity = 15/37 (40.54%), Postives = 21/37 (56.76%), Query Frame = 0 Query: 423 GEYLHKLNSTRHVAKSLLQKSNVPFGSFTEKLVTSLP 459 G+++ + KSL++K N P GS KLV SLP Sbjct: 901 GDFVESQAGREFLLKSLVEKQNEPIGSSRSKLVLSLP 1011
BLAST of EMLSAG00000007812 vs. L. salmonis peptides
Match: EMLSAP00000007812 (pep:novel supercontig:LSalAtl2s:LSalAtl2s458:225378:230133:1 gene:EMLSAG00000007812 transcript:EMLSAT00000007812 description:"maker-LSalAtl2s458-snap-gene-2.40") HSP 1 Score: 1268.83 bits (3282), Expect = 0.000e+0 Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 0 Query: 1 MEKPRTVMEFEEHALVYALDPTKDLIFSFHEDGSLWSTQCQSNSSSWSCKKLAQLPELLGKEVYGLYLIKALEMNKEVMDGLGIESPSGTSLFIFIASNDDPIYTCMSYCNDNKVSNPFHLPNHYKNPYLEYYLYPRSNNNLLDLLKFHKKERIKDDIITYKEIVDIQTFPKAFYILDKNGCLFEYNKECNVTKIQTDVAGFCLRRALGSCIKKXGAIYTWKLPFQPEPHNDNEESEDVHNLSRPALLRKTLEASKSLGKINKILSQNSVLLSQYELLPQIDSSKIQVNISVTKDSIIKFDILNLLDSDLNGEFWFLKVLFTSHFSSEQFYQVFRLPQRLPRVEPWKVHSEIPEINKHPKYIPLSIHLFLVFTAPEKIRITSQPLSQFRLTAFDFLQVMQESKIPIQKHKTSLPITSTLESIGEYLHKLNSTRHVAKSLLQKSNVPFGSFTEKLVTSLPKELLQLNTNLSDLSEYSELRLFNHENVCYLQMISTDESQSVQLIFKNMGESMHGALKRSLVFLNKELIREGYYKEISREVIQNLRTARKKVDALYDTNDIEKHREAYLFLRSKGKGSVEVEVREQESESRARGGKELRQLNEEIEAETKRKKRFKHLNI 618 MEKPRTVMEFEEHALVYALDPTKDLIFSFHEDGSLWSTQCQSNSSSWSCKKLAQLPELLGKEVYGLYLIKALEMNKEVMDGLGIESPSGTSLFIFIASNDDPIYTCMSYCNDNKVSNPFHLPNHYKNPYLEYYLYPRSNNNLLDLLKFHKKERIKDDIITYKEIVDIQTFPKAFYILDKNGCLFEYNKECNVTKIQTDVAGFCLRRALGSCIKKXGAIYTWKLPFQPEPHNDNEESEDVHNLSRPALLRKTLEASKSLGKINKILSQNSVLLSQYELLPQIDSSKIQVNISVTKDSIIKFDILNLLDSDLNGEFWFLKVLFTSHFSSEQFYQVFRLPQRLPRVEPWKVHSEIPEINKHPKYIPLSIHLFLVFTAPEKIRITSQPLSQFRLTAFDFLQVMQESKIPIQKHKTSLPITSTLESIGEYLHKLNSTRHVAKSLLQKSNVPFGSFTEKLVTSLPKELLQLNTNLSDLSEYSELRLFNHENVCYLQMISTDESQSVQLIFKNMGESMHGALKRSLVFLNKELIREGYYKEISREVIQNLRTARKKVDALYDTNDIEKHREAYLFLRSKGKGSVEVEVREQESESRARGGKELRQLNEEIEAETKRKKRFKHLNI Sbjct: 1 MEKPRTVMEFEEHALVYALDPTKDLIFSFHEDGSLWSTQCQSNSSSWSCKKLAQLPELLGKEVYGLYLIKALEMNKEVMDGLGIESPSGTSLFIFIASNDDPIYTCMSYCNDNKVSNPFHLPNHYKNPYLEYYLYPRSNNNLLDLLKFHKKERIKDDIITYKEIVDIQTFPKAFYILDKNGCLFEYNKECNVTKIQTDVAGFCLRRALGSCIKKXGAIYTWKLPFQPEPHNDNEESEDVHNLSRPALLRKTLEASKSLGKINKILSQNSVLLSQYELLPQIDSSKIQVNISVTKDSIIKFDILNLLDSDLNGEFWFLKVLFTSHFSSEQFYQVFRLPQRLPRVEPWKVHSEIPEINKHPKYIPLSIHLFLVFTAPEKIRITSQPLSQFRLTAFDFLQVMQESKIPIQKHKTSLPITSTLESIGEYLHKLNSTRHVAKSLLQKSNVPFGSFTEKLVTSLPKELLQLNTNLSDLSEYSELRLFNHENVCYLQMISTDESQSVQLIFKNMGESMHGALKRSLVFLNKELIREGYYKEISREVIQNLRTARKKVDALYDTNDIEKHREAYLFLRSKGKGSVEVEVREQESESRARGGKELRQLNEEIEAETKRKKRFKHLNI 618 The following BLAST results are available for this feature:
BLAST of EMLSAG00000007812 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000007812 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000007812 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000007812 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000007812 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000007812 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000007812 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s458:225378..230133+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000007812-690578 ID=EMLSAG00000007812-690578|Name=EMLSAG00000007812|organism=Lepeophtheirus salmonis|type=gene|length=4756bp|location=Sequence derived from alignment at LSalAtl2s458:225378..230133+ (Lepeophtheirus salmonis)back to top Add to Basket
|