EMLSAG00000009377, EMLSAG00000009377-692143 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823892|gb|GAXK01130676.1| (TSA: Calanus finmarchicus comp178302_c0_seq9 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.098e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 58 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQRA---RTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 471
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823893|gb|GAXK01130675.1| (TSA: Calanus finmarchicus comp178302_c0_seq8 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.350e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 58 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQR---ARTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 471
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823898|gb|GAXK01130670.1| (TSA: Calanus finmarchicus comp178302_c0_seq3 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.628e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 241 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQR---ARTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 654
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823896|gb|GAXK01130672.1| (TSA: Calanus finmarchicus comp178302_c0_seq5 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.683e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 183 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQRA---RTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 596
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823894|gb|GAXK01130674.1| (TSA: Calanus finmarchicus comp178302_c0_seq7 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.824e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 154 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQRA---RTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 567
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823900|gb|GAXK01130668.1| (TSA: Calanus finmarchicus comp178302_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 1.874e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 241 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQR---ARTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 654
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823897|gb|GAXK01130671.1| (TSA: Calanus finmarchicus comp178302_c0_seq4 transcribed RNA sequence) HSP 1 Score: 60.4622 bits (145), Expect = 2.082e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 154 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQR---ARTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 567
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823899|gb|GAXK01130669.1| (TSA: Calanus finmarchicus comp178302_c0_seq2 transcribed RNA sequence) HSP 1 Score: 60.8474 bits (146), Expect = 2.146e-9 Identity = 44/142 (30.99%), Postives = 76/142 (53.52%), Query Frame = 0 Query: 6 IIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEI 146 I KNWN+L + L + EK E F+ + K+++LG +L +++ + LA+ E+++R R + +K E + G K +++ ++K+LGR V+V++RYK LT + GPFT ED+ IL E+ Sbjct: 183 ITKNWNKLIEELKLKDHEKIVIEEVFETPIKEKDLGLKRNVLGYFLSQELTKVRLAT-EVFQR---ARTILWANKGEFTTEEDQKILEGRKEGKSWSALTKQLGRTSHVTVQDRYKILTGDYKQNKHGPFTVTEDELILREV 596
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921452|gb|GAXK01036923.1| (TSA: Calanus finmarchicus comp471720_c1_seq21 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 3.267e-9 Identity = 59/234 (25.21%), Postives = 113/234 (48.29%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKK 364 F EED +L +++ G++ + ++A + R S +I+ R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + I E A + L ST+ R ++D +E KSK IKK Sbjct: 184 FKPEEDQVLLDAMEQFGDHID-YKQIAEDLQRTKS-SIRSRVKKLKTGISTKGHRSFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMIAEFANTSSMPGGKVLGSTLKRQQEIIDYFECYVKSKNIKK 867
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921461|gb|GAXK01036914.1| (TSA: Calanus finmarchicus comp471720_c1_seq12 transcribed RNA sequence) HSP 1 Score: 56.225 bits (134), Expect = 8.176e-8 Identity = 59/235 (25.11%), Postives = 113/235 (48.09%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVI-RNDILVDIYENIKKSKQIKK 364 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + + E A ++ V+ R ++D +E KSK IKK Sbjct: 616 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMVAEIANTAFVPGGKKVLGRVLKRQQEIIDYFECYVKSKNIKK 1302
BLAST of EMLSAG00000009377 vs. L. salmonis peptides
Match: EMLSAP00000009377 (pep:novel supercontig:LSalAtl2s:LSalAtl2s59:489485:501247:-1 gene:EMLSAG00000009377 transcript:EMLSAT00000009377 description:"maker-LSalAtl2s59-augustus-gene-5.21") HSP 1 Score: 733.791 bits (1893), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 Query: 1 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC 365 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC Sbjct: 1 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC 365 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009377 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000009377 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009377 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009377 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009377 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009377 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s59:489485..501247- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009377-692143 ID=EMLSAG00000009377-692143|Name=EMLSAG00000009377|organism=Lepeophtheirus salmonis|type=gene|length=11763bp|location=Sequence derived from alignment at LSalAtl2s59:489485..501247- (Lepeophtheirus salmonis)back to top Add to Basket
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