EMLSAG00000009377, EMLSAG00000009377-692143 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921463|gb|GAXK01036912.1| (TSA: Calanus finmarchicus comp471720_c1_seq10 transcribed RNA sequence) HSP 1 Score: 56.225 bits (134), Expect = 8.272e-8 Identity = 59/235 (25.11%), Postives = 113/235 (48.09%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVI-RNDILVDIYENIKKSKQIKK 364 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + + E A ++ V+ R ++D +E KSK IKK Sbjct: 642 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMVAEIANTAFVPGGKKVLGRVLKRQQEIIDYFECYVKSKNIKK 1328
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921462|gb|GAXK01036913.1| (TSA: Calanus finmarchicus comp471720_c1_seq11 transcribed RNA sequence) HSP 1 Score: 56.225 bits (134), Expect = 8.398e-8 Identity = 59/235 (25.11%), Postives = 113/235 (48.09%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVI-RNDILVDIYENIKKSKQIKK 364 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + + E A ++ V+ R ++D +E KSK IKK Sbjct: 637 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMVAEIANTAFVPGGKKVLGRVLKRQQEIIDYFECYVKSKNIKK 1323
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921464|gb|GAXK01036911.1| (TSA: Calanus finmarchicus comp471720_c1_seq9 transcribed RNA sequence) HSP 1 Score: 55.8398 bits (133), Expect = 9.503e-8 Identity = 59/235 (25.11%), Postives = 113/235 (48.09%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVI-RNDILVDIYENIKKSKQIKK 364 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + + E A ++ V+ R ++D +E KSK IKK Sbjct: 657 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMVAEIANTAFVPGGKKVLGRVLKRQQEIIDYFECYVKSKNIKK 1343
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823890|gb|GAXK01130678.1| (TSA: Calanus finmarchicus comp178302_c0_seq11 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 1.345e-6 Identity = 42/149 (28.19%), Postives = 77/149 (51.68%), Query Frame = 0 Query: 5 SIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGEN 152 +I KNWN+L + F L +E+ E F+ + K+++LG +L + + LA+ ++++R R + +K E + ++ G K +++ ++KELGR SV+ RY L + + G FT ED+ IL E+ + +N Sbjct: 223 AIAKNWNKLVEEFKLKAQEEDVIKELFENPSKEKDLGLKRNVLGYFLSQGLANVRLAT-DVYQR---ARTIFCSTKGEFTMEDDQIILEGRKEGKSWSALAKELGRTGHHSVQYRYNTLIGDYKLNKHGRFTVTEDELILKEVFAVNQN 657 HSP 2 Score: 42.743 bits (99), Expect = 1.041e-3 Identity = 41/157 (26.11%), Postives = 75/157 (47.77%), Query Frame = 0 Query: 131 RGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMEL 287 +G FT E+D IL E K G K+++ +A ++GR ++++RY L FT E E ++K + N L K T ++ +K +R ++ +HW + + P LL + G + + LI L+ ++K+ ++D+ EL Sbjct: 1 KGEFTMEDDQIIL-EGRKEG---KSWSALAKELGRTGHHSVQYRYNTLIGDYKLNKHGRFTVTEDELILKEVFAVNQNI-LVDRKITVENLKNIGEKLQRQYKVVSEHWRRKLEPILLRYHAGTLESDVREVLINHLV----KNKLNYTQEIDWSEL 444
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921453|gb|GAXK01036922.1| (TSA: Calanus finmarchicus comp471720_c1_seq20 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 1.901e-6 Identity = 56/235 (23.83%), Postives = 109/235 (46.38%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTI--MSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVI-RNDILVDIYENIKKSKQIKK 364 F EED +L +++ G+ + ++A + +R S I+ R KLK FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I ++++ +KK +D++ + + E A ++ V+ R ++D +E KSK IKK Sbjct: 202 FKPEEDQVLLDAMEQFGDQID-YKQIAKDL-QRTSTAIRCRVKKLKTGKSTRGHLSFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVTLTKDNLKKQS-EDITLEMVAEIANTAFVPGGKKVLGRVLKRQQEIIDYFECYVKSKNIKK 888
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592782433|gb|GAXK01172135.1| (TSA: Calanus finmarchicus comp62177_c11_seq17 transcribed RNA sequence) HSP 1 Score: 50.8322 bits (120), Expect = 3.905e-6 Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 0 Query: 130 RRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLEL--FPGQTKQSIQ 300 R+G F+ EED IL ++K G+ A ++ ++GR + +K RY L T +T +E K+I++E + + T + + +K KR+ + HWL + P L ++ G N N + ++LL E+ + D+D+ EL +L F G T Q +Q Sbjct: 662 RKGEFSTEEDQIILDFVEKEGKKWSALDK---QLGRCNQTAVKQRYDVL---TNDYEGGSYTLSED----KIIVSEVFSVDRDGKNITAEDWKRIGEKIKRNPMGVRMHWLLTLEPVLTRYQAGTLNMN----VKKVLLDHLVENNMDYPQDVDWKELAKLPKFAGATSQYLQ 1138
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921458|gb|GAXK01036917.1| (TSA: Calanus finmarchicus comp471720_c1_seq15 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 5.342e-6 Identity = 44/175 (25.14%), Postives = 84/175 (48.00%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTIMS 307 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I++ Sbjct: 616 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVT 1125
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921459|gb|GAXK01036916.1| (TSA: Calanus finmarchicus comp471720_c1_seq14 transcribed RNA sequence) HSP 1 Score: 50.447 bits (119), Expect = 5.425e-6 Identity = 44/175 (25.14%), Postives = 84/175 (48.00%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTIMS 307 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I++ Sbjct: 642 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVT 1151
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592921460|gb|GAXK01036915.1| (TSA: Calanus finmarchicus comp471720_c1_seq13 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 6.301e-6 Identity = 44/175 (25.14%), Postives = 84/175 (48.00%), Query Frame = 0 Query: 134 FTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQY-FLTIMS 307 F EED +L I+K G+ + ++A + +R S +IK+R KLK + + FT AE ++ +L L+ + + + ++ + RD S WL ++ +L H G N + + PL L+ ++ + D ++ F G T+QS++Y F++I++ Sbjct: 657 FKPEEDQVLLDAIEKFGDYID-YKQIAKDL-QRSSDSIKYRLKKLKTGKSTKGHRMFTIAEDMVILDAVLQHLNGQSLEMLTLPRSDWMEIGAQIGRDDSSPRLRWLIILRAWILQHYAGTLNLDIRRPLANYLVENFEDMH---SIDWSFVNTESQFAGHTEQSLRYLFVSIVT 1166
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Match: gi|592823891|gb|GAXK01130677.1| (TSA: Calanus finmarchicus comp178302_c0_seq10 transcribed RNA sequence) HSP 1 Score: 47.7506 bits (112), Expect = 2.227e-5 Identity = 38/149 (25.50%), Postives = 80/149 (53.69%), Query Frame = 0 Query: 5 SIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKXXXXXXXXXXXXXG-KSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGEN 152 +I KNWN+L + L ++E+ E F+ + K+++LG +L + + + LA+ ++++R R + +K E + ++ G K +++ ++K+LGR ++V +R+ L + + G FT +ED+ IL E+ + +N Sbjct: 71 AIAKNWNKLVEELELKDQEEDVIKELFENPSKEKDLGLKRNVLGYFLSQGLSKVRLAT-DVYQR---ARTIFCSTKGEFTMEDDQIILEGRKEGKSWSALTKQLGRTSHITVVDRHNMLIGDYKLNKHGRFTVKEDEQILREVFAVNKN 505
BLAST of EMLSAG00000009377 vs. L. salmonis peptides
Match: EMLSAP00000009377 (pep:novel supercontig:LSalAtl2s:LSalAtl2s59:489485:501247:-1 gene:EMLSAG00000009377 transcript:EMLSAT00000009377 description:"maker-LSalAtl2s59-augustus-gene-5.21") HSP 1 Score: 733.791 bits (1893), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0 Query: 1 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC 365 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC Sbjct: 1 KXXXSIIKNWNELSDRFGLDEKEKTECIEGFDIIHPRSNNRYKKHILGIYLGKDIDRHGLASYEIWRRICFKRRMSRFSKEEEELILKRVEELGKSSQAFQVISKELGRFYSVSVKNRYKQLTQKSPMYRRGPFTQEEDDFILAEIDKLGENAKAFNEVALKIGRRHSRNIKFRYYKLKYSTVAEPKKDFTPAEQEELIKLILNEYPNTELKYIKPTDAFFTDLYKKFKRDSSILEKHWLKVILPALLSHELGLSNQNWQIPLIQILLTWTKESKIRMAXDLDYMELLELFPGQTKQSIQYFLTIMSRNIIKKVGRKDLSFQEILENAVRLNYSARSPLISTVIRNDILVDIYENIKKSKQIKKC 365 The following BLAST results are available for this feature:
BLAST of EMLSAG00000009377 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000009377 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000009377 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000009377 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000009377 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000009377 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000009377 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s59:489485..501247- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000009377-692143 ID=EMLSAG00000009377-692143|Name=EMLSAG00000009377|organism=Lepeophtheirus salmonis|type=gene|length=11763bp|location=Sequence derived from alignment at LSalAtl2s59:489485..501247- (Lepeophtheirus salmonis)back to top Add to Basket
|