EMLSAG00000009673, EMLSAG00000009673-692439 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000009673
Unique NameEMLSAG00000009673-692439
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Match: gi|592794530|gb|GAXK01160038.1| (TSA: Calanus finmarchicus comp142503_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 6.289e-5
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSKN-FKECLSLGNGTRNLILS------VGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRC 143
            C+  S  +T+ T +PF+GRLF+++  ++C + GN      L+          CG E E+   +S+ + VQ  P +Q+  D  V++ C
Sbjct: 1235 CTGESMTVTLNTEEPFTGRLFAQSAARDCETRGNARTETQLTFFFEEAAAAKCGVEREERGVYSNVVVVQHHPVIQRKGDRAVQLFC 1495          
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Match: gi|592794531|gb|GAXK01160037.1| (TSA: Calanus finmarchicus comp142503_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 6.304e-5
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSKN-FKECLSLGNGTRNLILS------VGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRC 143
            C+  S  +T+ T +PF+GRLF+++  ++C + GN      L+          CG E E+   +S+ + VQ  P +Q+  D  V++ C
Sbjct: 1258 CTGESMTVTLNTEEPFTGRLFAQSAARDCETRGNARTETQLTFFFEEAAAAKCGVEREERGVYSNVVVVQHHPVIQRKGDRAVQLFC 1518          
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Match: gi|592794528|gb|GAXK01160040.1| (TSA: Calanus finmarchicus comp142503_c3_seq4 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 7.489e-5
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSKN-FKECLSLGNGTRNLILS------VGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRC 143
            C+  S  +T+ T +PF+GRLF+++  ++C + GN      L+          CG E E+   +S+ + VQ  P +Q+  D  V++ C
Sbjct: 1235 CTGESMTVTLNTEEPFTGRLFAQSAARDCETRGNARTETQLTFFFEEAAAAKCGVEREERGVYSNVVVVQHHPVIQRKGDRAVQLFC 1495          
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Match: gi|592794529|gb|GAXK01160039.1| (TSA: Calanus finmarchicus comp142503_c3_seq3 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 7.508e-5
Identity = 26/87 (29.89%), Postives = 46/87 (52.87%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSKN-FKECLSLGNGTRNLILS------VGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRC 143
            C+  S  +T+ T +PF+GRLF+++  ++C + GN      L+          CG E E+   +S+ + VQ  P +Q+  D  V++ C
Sbjct: 1258 CTGESMTVTLNTEEPFTGRLFAQSAARDCETRGNARTETQLTFFFEEAAAAKCGVEREERGVYSNVVVVQHHPVIQRKGDRAVQLFC 1518          
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Match: gi|592753660|gb|GAXK01200753.1| (TSA: Calanus finmarchicus comp292909_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 44.669 bits (104), Expect = 5.808e-4
Identity = 36/124 (29.03%), Postives = 60/124 (48.39%), Query Frame = 0
Query:  227 GQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLRLTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYL 350
            G+   L  +   P  K+  KV +CFA S K  S++L N  G   +N+  S F + +S+ G++T+   + MF+F +SN + L+C ++   K     E       D +G      S +QE   H +
Sbjct:  804 GREYELQAEMDAPSDKYGIKVRNCFAFSDKNSSVQLLNNKGCPERNVL-SQFVFDSSQ-GVSTSKL-YSMFRFPDSNTVHLQCDILIC-KADDCGETLCVTDPDSEGRSFAKQSGSQEDDEHRM 1163          
BLAST of EMLSAG00000009673 vs. L. salmonis peptides
Match: EMLSAP00000009673 (pep:novel supercontig:LSalAtl2s:LSalAtl2s623:283132:286240:1 gene:EMLSAG00000009673 transcript:EMLSAT00000009673 description:"maker-LSalAtl2s623-snap-gene-2.46")

HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0
Query:    1 MHVVEMAGAYVFLFMMNSDLMIIQFLRRVPSMYHLLAPVIIFISLFSRHAKSEDIFFKQLYGSCSTNSYMLTIYTSKPFSGRLFSKNFKECLSLGNGTRNLILSVGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYVQAWMDLLPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLRLTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYLRSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIALVFSCMLWSRAKSFTSQLNSNTKFPGGLIPRPFKRIPGPYVVSSLPYR 445
            MHVVEMAGAYVFLFMMNSDLMIIQFLRRVPSMYHLLAPVIIFISLFSRHAKSEDIFFKQLYGSCSTNSYMLTIYTSKPFSGRLFSKNFKECLSLGNGTRNLILSVGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYVQAWMDLLPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLRLTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYLRSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIALVFSCMLWSRAKSFTSQLNSNTKFPGGLIPRPFKRIPGPYVVSSLPYR
Sbjct:    1 MHVVEMAGAYVFLFMMNSDLMIIQFLRRVPSMYHLLAPVIIFISLFSRHAKSEDIFFKQLYGSCSTNSYMLTIYTSKPFSGRLFSKNFKECLSLGNGTRNLILSVGLSCGAEFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYVQAWMDLLPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLRLTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYLRSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIALVFSCMLWSRAKSFTSQLNSNTKFPGGLIPRPFKRIPGPYVVSSLPYR 445          
BLAST of EMLSAG00000009673 vs. Select Arthropod Genomes
Match: gb|EFA07190.1| (hypothetical protein TcasGA2_TC010196 [Tribolium castaneum])

HSP 1 Score: 55.4546 bits (132), Expect = 1.944e-7
Identity = 84/373 (22.52%), Postives = 154/373 (41.29%), Query Frame = 0
Query:   63 SCSTNSYMLTIYTSKPFSGRLFSKNFK-ECLSLGNGTRNLILSVGLS-CGAEF--------EKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYV-QAWMDLLPLLSGYQH---FFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLR-----LTNPAGQSVQNIFPSNFTYYTSKSGITTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSE--XKFNSLNQEIPS--HYLRSDDLSAQESTQ---ELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIALVFSCMLWSRAK 409
            +C   S+  T+    PF G +F+K+F  EC +LG  + ++ +++  + CG           EK L +S  +  Q+D +L+Q+ D+   + C  +    A LI     VD +   +L  R   ++    ++ D+          ++++E+ E   V + WM++ P   G +       +G+   L IK   P+     KV  C A  G  +S +        P  + +  +F        S      A + F  FKF + + L L C L         ++   +N  D +  +    FNS+    P+     +S+ L   E T      L  +R F     C+S  K+ + F +L ++   A+V +     R++
Sbjct:   44 TCDVRSFNATVTLQHPFKGLVFAKDFSHECNALGTLSNSVTINLPTAGCGIRLSSRANEKGEKELVYSVVLVAQQDRHLRQIADQEKHLEC--VVKDDAFLIESQPVVD-VLKNDLLERRGKSQRSGRMKKDQ----------DLEDEIRETFSVARVWMEITP--EGDEANGGTLKVGEAAVLTIKSTLPEGIGW-KVVECSAHDGLGDSSQKLLDDYGCPTDELLFPVFRMGPVQVISVMKHQEAVSRFAAFKFPDRDRLHLSCYLELCRGTCPEVDCSDKNSTDGEVLDRLKVFNSVEVLAPAIDDLRKSERLQLSEPTTSPFSSLPGDRKF-----CVSPDKVAITFCILGVIFLCAVVVAACALLRSR 395          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1130213310|ref|XP_019755289.1| (PREDICTED: uncharacterized protein LOC109534154 isoform X2 [Dendroctonus ponderosae])

HSP 1 Score: 71.2478 bits (173), Expect = 9.988e-10
Identity = 99/394 (25.13%), Postives = 169/394 (42.89%), Query Frame = 0
Query:   63 SCSTNSYMLTIYTSKPFSGRLFSKNFK-ECLSLGNGTRNLILSV-GLSCGAEF-----EKGLK---FSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYV-QAWMDLLPLLSGY--QHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSG-KKESLRLTNPAGQSV-QNIFP-SNFTYYTSKSGI--TTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXK----------------------FNSLNQEIPS-----HYLRSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIA-LVFSCMLWSRAKS 410
            SC + ++ +T+ T++PF G  F+++F  ECL LG G   L LS+    CG        E GL    +   + +Q+D YL+Q+ D+   + CE +K+  A L++    +D +  +  R++   N     L  D+G  +     ++++ E+ E +   +AWM++ P  +    +    +G+ V L +K   P S    ++  C A  G    S +L +  G  V + + P   F      + +    A A F  FKF + + L L+CRL        I       +D D  +E +                      +NS+    P       + +  D SA+       +I  D      CMS  KM +AF +L +V  +A LV  C L +  +S
Sbjct:   40 SCDSQTFNITVATTRPFKGVAFARDFAHECLVLGTGINELFLSLPAAGCGVRLKTSVDEGGLARMTYGVALVLQQDRYLRQISDQDQMVHCE-VKD-EAFLVKSRPMIDAVKGEIKRSK--ANHRVGRL-MDEGWSKDLS-QSQLEEELREAMSASRAWMEITPENNAQRPEDTVEVGETVLLTVKSTLP-SGIGWRIVDCTAHDGLGDSSQKLLDDRGCPVDEALLPVPKFGPLRPIASMRHQEAVARFAAFKFPDRDRLHLRCRL-------QICRGACAKVDCDSSNETERDNRIGRANSGKSGEVLDRLEVYNSVEVIAPDIDDVRSFRQKPDPSAEFDAYPFPKIPGDRT---FCMSIDKMAIAFCILGVVFLLAVLVAVCSLLNSRRS 416          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1130213306|ref|XP_019755288.1| (PREDICTED: uncharacterized protein LOC109534154 isoform X1 [Dendroctonus ponderosae])

HSP 1 Score: 70.4774 bits (171), Expect = 1.787e-9
Identity = 98/395 (24.81%), Postives = 170/395 (43.04%), Query Frame = 0
Query:   63 SCSTNSYMLTIYTSKPFSGRLFSKNFK-ECLSLGNGTRNLILSV-GLSCGAEF-----EKGLK---FSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYV-QAWMDLLPLLSGY--QHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSG-KKESLRLTNPAGQSV-QNIFP-SNFTYYTSKSGI--TTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXK----------------------FNSLN------QEIPSHYLRSDDLSAQESTQELLEIERDFEEPLVCMSRLKMVLAFGVLILVLFIA-LVFSCMLWSRAKS 410
            SC + ++ +T+ T++PF G  F+++F  ECL LG G   L LS+    CG        E GL    +   + +Q+D YL+Q+ D+   + CE +K+  A L++    +D +  +  R++   N     L  D+G  +     ++++ E+ E +   +AWM++ P  +    +    +G+ V L +K   P S    ++  C A  G    S +L +  G  V + + P   F      + +    A A F  FKF + + L L+CRL        I       +D D  +E +                      +NS+        ++ S   + D  +A+       +I  D      CMS  KM +AF +L +V  +A LV  C L +  +S
Sbjct:   40 SCDSQTFNITVATTRPFKGVAFARDFAHECLVLGTGINELFLSLPAAGCGVRLKTSVDEGGLARMTYGVALVLQQDRYLRQISDQDQMVHCE-VKD-EAFLVKSRPMIDAVKGEIKRSK--ANHRVGRL-MDEGWSKDLS-QSQLEEELREAMSASRAWMEITPENNAQRPEDTVEVGETVLLTVKSTLP-SGIGWRIVDCTAHDGLGDSSQKLLDDRGCPVDEALLPVPKFGPLRPIASMRHQEAVARFAAFKFPDRDRLHLRCRL-------QICRGACAKVDCDSSNETERDNRIGRANSGKSGEVLDRLEVYNSVEVIAPDIDDVRSFRQKPDPSAAEFDAYPFPKIPGDRT---FCMSIDKMAIAFCILGVVFLLAVLVAVCSLLNSRRS 417          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|952537408|gb|KRT84187.1| (hypothetical protein AMK59_574, partial [Oryctes borbonicus])

HSP 1 Score: 69.3218 bits (168), Expect = 3.314e-9
Identity = 71/271 (26.20%), Postives = 121/271 (44.65%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSKNF-KECLSLGNGTRNLILSVGLS-CGA-----EFEKGLKFSDQIYVQKDPYLQQVDDEVVEIRC----EPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVY------VQAWMDLLPL-LSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLR-LTNPAGQSVQNIFPSNFTYYTSKS----GITTATASFLMFKFANSNELILKCRL 311
            C +NS  ++I   +PF+G  F K F +EC  +GN +R+L+L++  S CG      E  + L ++  + +Q+D +L+Q+ DE   I C    +     +A++ R  + +  +F  N R               KG ++  +W+NE  + +            +AWM++LP   + +     +G+ V LI+K   P      +V  C A  G  +S + L N  G  +       F+    K         A + F  FKF + + L LKC L
Sbjct:   41 CDSNSLNVSILLEQPFNGVFFVKEFSQECRVVGNSSRSLVLNLSSSGCGVRLNEDEESQRLYYAITVVLQQDKFLRQISDETKLITCYLANDSFNVKSANMERTVKKL--MFDGNRR---------------KGRMKI-DWNNETKSTLSNSTLSDTLQAARAWMEILPAKFTKHSGVLKVGEPVLLIVKSTLPAGIGW-RVVDCVAHDGLGDSFQTLLNQNGCPIDEQLLPAFSKRPPKPIALMKHQEAVSKFAAFKFPDRDILHLKCNL 292          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1005957053|ref|XP_015786934.1| (PREDICTED: uncharacterized protein LOC107364129 isoform X2 [Tetranychus urticae])

HSP 1 Score: 69.3218 bits (168), Expect = 4.033e-9
Identity = 67/269 (24.91%), Postives = 124/269 (46.10%), Query Frame = 0
Query:   63 SCSTNSYMLTIYTSKPFSGRLFSKNF-KECLSLGNGTRNLILSVGL-SCGAEF--EKGL-KFSDQIYVQKDPYLQQVDDEVVEIRCEP----LKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETD-KGHVRTAEWHNEVDNEVDEGVYVQAWMDL----LPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKES-LRLTNPAGQSVQNIFPSNFTYYTSKSGITTAT-ASFLMFKFANSNELILKCRLIFAS 315
            +CS  + M TI   +PF G +++K F +EC   GNGT+ +  S  +  CG +   +KGL +F   +YVQ D  +QQ  D+ + +RC P    L  G         +  P    NL+          SL  D +  V+  + H+  ++ V     ++ +MD+    +P L        IG+++++++K K        ++  CFA      +   LT+  G ++  +   NF  +  ++G +     +F  FKF + + L ++C ++  +
Sbjct:   32 ACSRTNLMTTITFQQPFHGIVYAKGFSQECQIDGNGTKVIQFSSPVHKCGIKISEDKGLYQFELHLYVQYDKNIQQSQDDRILVRCAPQEILLSGGMGRRSDEAASKSP----NLK----------SLHGDSRIQVKPMDNHHFAESTV---ASIECYMDIFRGRIPHLKTIDSHVNIGEDITVLVKIKKMLGI-DTRLSRCFAHDRTMTTKFDLTDEDGCTLDAVIMPNFKEFVHETGNSKVLFTTFPAFKFPDRSNLHIQCTVVVCN 282          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1059387268|ref|XP_017768838.1| (PREDICTED: uncharacterized protein LOC108556987 [Nicrophorus vespilloides])

HSP 1 Score: 65.4698 bits (158), Expect = 7.206e-8
Identity = 82/369 (22.22%), Postives = 152/369 (41.19%), Query Frame = 0
Query:   63 SCSTNSYMLTIYTSKPFSGRLFSKNF-KECLSLGNGTRNLILSVGLS-CGAEFEKGLK---FSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNE---------VDEGVYVQAWMDLLPL-LSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSG-KKESLRLTNPAGQSVQN-IFPSNFTYYTSKSGI---TTATASFLMFKFANSNELILKCRLIFASKVPIILEARAENIDDDQGSEXKFNSLNQEIPSHYLRSDDLSAQE------STQELLEIERDFEEPL----------VCMSRLKMVLAFGVLILVLF 395
            SC   ++ +++ T KPF G +F+K+F +EC   G   +++ +S   S CG           +   + VQ+D +L+Q+ D+   ++C  ++N   S       V+    + +  +  + E +D   +  G ++   W  E+  E          D  +  +AWM++ P  ++       +G+   LI+K   P      KV  C A  G    S +L +  G  V   + P     ++   G+     A++ F  FKF + + L L C L        +  ++ + ID  +G+    N    E      R +  ++ E        +++ ++ER   +P            C+S  KM L F VL L+  
Sbjct:   43 SCDLRNFNVSVTTEKPFKGIIFAKDFSQECRGYGVMKKDVSVSFPTSGCGVRLTSNADEMFYMITVVVQQDKHLRQIKDQERTVQCR-IENSAFS-------VNSRMMEEVIMKEIITEKRDR-SSRTGRMKQEGWSKEISPENYSSETKELNDALLAARAWMEIAPSNVNQKDGILQVGEEAVLIVKSTLPVGIGW-KVVDCVAHDGLGDSSQKLLDDNGCPVDELLLPEPSKGHSRSIGMMRHQEASSKFSAFKFPDRDRLHLSCSL-------QLCRSKCQKIDCGEGNRISRNLRRGEEGEILDRLEVFNSVEVLAPGIELEDIRQLERSEADPFRFGNIPGDRTFCVSPDKMALTFCVLGLIFL 394          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1005957057|ref|XP_015786936.1| (PREDICTED: uncharacterized protein LOC107364129 isoform X4 [Tetranychus urticae])

HSP 1 Score: 64.6994 bits (156), Expect = 1.211e-7
Identity = 65/259 (25.10%), Postives = 119/259 (45.95%), Query Frame = 0
Query:   70 MLTIYTSKPFSGRLFSKNF-KECLSLGNGTRNLILSVGL-SCGAEF--EKGL-KFSDQIYVQKDPYLQQVDDEVVEIRCEP----LKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETD-KGHVRTAEWHNEVDNEVDEGVYVQAWMDL----LPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKES-LRLTNPAGQSVQNIFPSNFTYYTSKSGITTAT-ASFLMFKFANSNELILKCRLI 312
            M TI   +PF G +++K F +EC   GNGT+ +  S  +  CG +   +KGL +F   +YVQ D  +QQ  D+ + +RC P    L  G         +  P    NL+          SL  D +  V+  + H+  ++ V     ++ +MD+    +P L        IG+++++++K K        ++  CFA      +   LT+  G ++  +   NF  +  ++G +     +F  FKF + + L ++C ++
Sbjct:    1 MTTITFQQPFHGIVYAKGFSQECQIDGNGTKVIQFSSPVHKCGIKISEDKGLYQFELHLYVQYDKNIQQSQDDRILVRCAPQEILLSGGMGRRSDEAASKSP----NLK----------SLHGDSRIQVKPMDNHHFAESTV---ASIECYMDIFRGRIPHLKTIDSHVNIGEDITVLVKIKKMLGI-DTRLSRCFAHDRTMTTKFDLTDEDGCTLDAVIMPNFKEFVHETGNSKVLFTTFPAFKFPDRSNLHIQCTVV 241          
BLAST of EMLSAG00000009673 vs. nr
Match: gi|1009584013|ref|XP_015922589.1| (PREDICTED: uncharacterized protein LOC107451110 [Parasteatoda tepidariorum])

HSP 1 Score: 63.1586 bits (152), Expect = 5.527e-7
Identity = 66/264 (25.00%), Postives = 110/264 (41.67%), Query Frame = 0
Query:   64 CSTNSYMLTIYTSKPFSGRLFSK---NFKECLSL--GNGTRNLILSVGL-SCGAE----------FEKGLKFSDQIYVQKDPYLQQVDDEVVEIRCEPLKNGTASLIRYGENVDPIFYQNLRTRFAVNESKDSLETDKGHVRTAEWHNEVDNEVDEGVYVQAWMDLLPLLSGYQHFFFIGQNVSLIIKWKNPKSKHQPKVGSCFASSGKKESLRLTNPAGQSVQNIFPSNFTYYTS--KSGITTATASFLMFKFANSNELILKC 309
            C  N   ++I   KPF G ++SK   ++  C+ L  G+G  ++   + + SCG +           E G  F + + VQ DP +Q+V D+  ++RC        ++     NVD    Q +R  FA +     ++   G      W NEV   V                        IGQ ++L++  K+ +SK    V +C A  G +  + L + +G   +    S FT   +   S    + A F  FKF +S E+ ++C
Sbjct:  442 CEKNLMRVSIDFDKPFHGIIYSKGHFSYGRCVHLPAGSGHNSVQFDISINSCGMQGNSPSGHYGPTETGSYFENTVVVQYDPLVQEVWDQARKLRCNWHDQYEKTVTFRPFNVD--MLQVVRADFAGDNVGCWMQIQVG---KGPWANEVAGIVR-----------------------IGQTMTLVLAIKDDESKFDMMVRNCIAHDGNRAPIELVDSSGCITRPKLMSRFTKVKNFGSSASVLSFAHFQAFKFPDSTEVHIQC 677          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000009673 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000009673 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592794530|gb|GAXK01160038.1|6.289e-529.89TSA: Calanus finmarchicus comp142503_c3_seq2 trans... [more]
gi|592794531|gb|GAXK01160037.1|6.304e-529.89TSA: Calanus finmarchicus comp142503_c3_seq1 trans... [more]
gi|592794528|gb|GAXK01160040.1|7.489e-529.89TSA: Calanus finmarchicus comp142503_c3_seq4 trans... [more]
gi|592794529|gb|GAXK01160039.1|7.508e-529.89TSA: Calanus finmarchicus comp142503_c3_seq3 trans... [more]
gi|592753660|gb|GAXK01200753.1|5.808e-429.03TSA: Calanus finmarchicus comp292909_c0_seq1 trans... [more]

Pages

back to top
BLAST of EMLSAG00000009673 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000096730.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s623:28313... [more]
back to top
BLAST of EMLSAG00000009673 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of EMLSAG00000009673 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|EFA07190.1|1.944e-722.52hypothetical protein TcasGA2_TC010196 [Tribolium c... [more]
back to top
BLAST of EMLSAG00000009673 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 7
Match NameE-valueIdentityDescription
gi|1130213310|ref|XP_019755289.1|9.988e-1025.13PREDICTED: uncharacterized protein LOC109534154 is... [more]
gi|1130213306|ref|XP_019755288.1|1.787e-924.81PREDICTED: uncharacterized protein LOC109534154 is... [more]
gi|952537408|gb|KRT84187.1|3.314e-926.20hypothetical protein AMK59_574, partial [Oryctes b... [more]
gi|1005957053|ref|XP_015786934.1|4.033e-924.91PREDICTED: uncharacterized protein LOC107364129 is... [more]
gi|1059387268|ref|XP_017768838.1|7.206e-822.22PREDICTED: uncharacterized protein LOC108556987 [N... [more]
gi|1005957057|ref|XP_015786936.1|1.211e-725.10PREDICTED: uncharacterized protein LOC107364129 is... [more]
gi|1009584013|ref|XP_015922589.1|5.527e-725.00PREDICTED: uncharacterized protein LOC107451110 [P... [more]
back to top
BLAST of EMLSAG00000009673 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s623supercontigLSalAtl2s623:283132..286240 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s623-snap-gene-2.46
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000009673 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000009673EMLSAT00000009673-705520Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s623:283132..286240+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000009673-692439 ID=EMLSAG00000009673-692439|Name=EMLSAG00000009673|organism=Lepeophtheirus salmonis|type=gene|length=3109bp|location=Sequence derived from alignment at LSalAtl2s623:283132..286240+ (Lepeophtheirus salmonis)
ATGCATGTTGTTGAGATGGCAGGAGCGTACGTCTTCTTATTCATGATGGT AATAAAAGTACCGAAAGGATAAAAGTATACAAGTGATATTATTATTATTA TTATTAGAATAGTGACTTGATGATCATTCAGTTTTTGAGAAGAGTACCAA GCATGTACCATCTATTAGCTCCAGTGATTATCTTCATCTCCCTATTCTCC AGACATGCAAAGTCTGAGGATATATTTTTCAAACAGCTGTACGGATCCTG CTCAACAAACTCATATATGTTAACCATTTACACATCAAAGCCCTTCTCGG GACGACTCTTCAGTAAGAACTTTAAGGAGTGTCTAAGTTTGGGGAATGGA ACTCGCAATTTGATTCTGAGTGTGGGTTTGTCCTGTGGTGCAGAATTTGA AAAGGGACTCAAATTTAGTGATCAAATCTACGTACAAAAGGATCCATATC TTCAACAAGTTGATGATGAAGTCGTGGAAATTCGATGTGAGCCATTGAAA AATGGAACTGCCTCATTGATTCGTTATGGAGAAAATGTGGATCCAATTTT TTATCAGAATCTGCGCACCAGGTTTGCTGTGAATGAGTCAAAAGACTCTT TGGAGACGGACAAAGGACATGTTAGGACTGCAGAATGGCACAATGGTATG GAGGTTGAAAATTCATATGTAAATGGTATTTCAATGTCATATTGCAAAAT GAGTTGACCTAGGTTTTTAGGGTCAGCAGATGCTACTGTTACTGCAGCAG ATGGCTTTGTATTTTGCATCTGGCCTTTATAAATTGCATAAATGTGAATA TTTTATTAAAGGGGGGAGAGAGGAATTATTCAGATCTTGCTAAATAGCAA CAGTGTATTATGAAGGTCCGGGGGGAGGGGGAGCGTATATAAATGAATCA TTGGAATGATATATTTATATACATATATATGGTTGCTCAGAGTCCCCAAA GAATCTCATAAAAGTCTTGAGAATCGGAGTAATTATTTCACTTTTATTAT TTTTAGACATAGTTTATTTAGTTGAATTATTATTTAAATGATGCTAAATT TATACAAATATAAATATATGTACATATATTTATATTTGTGTGAATTTGAG AAAGTAAAAGTTAAGACAAAAAAAAAAAATTATTTTAACACACACGTTAT GATATACGAAAATTTGCTACCCCAAAAAACTCTCTCTAAGGTTTTTATTT TATTTTATGTCACATAATGTAGAAATGTCTGGAAATAATGTCATATCATA TGAATTTATCTTTAATTCCCTGTATAAAGTAAGTGAAATTATTATGTGTA ATGACGATTTCAATCTAATAATTAGGTTGTATAGAATAAGTAACTACGGA ACCATTAAAACGTATTTTCACTCAACCTCATAAATTACTGTTAAATGTTA TACAGCACAATACATATTTCAATTTCTTCCMCCATTTTCTTTTTTTTTTT TAATATAATTATTATCAAACCTGTGGAACCGTTATTGATTTTCTTTTTTA TATATATTAAAGACAGACATGCTTTTTAGAAAAAAAAAATCCTAAGAATT ATATTTGTACAAACATGTTGTATATACGTATATTAGAAACTCATTGTTAA AATTTTCTGCATTTCATAATTAAATTTCAAATTTCTCTCATATTTCATGA CTATTACATAAAGATATAGTTGTTTCATGACTTTTAGTAGATAAATAAGG ATTATGAATTAATATCTAGAGTGGAAAATTATTTTCTATTTTAATAAGTA TGTTTAAAAATCATGTTCTATTAATTAATTCTAAAAATTGGGGACTTTGT AGCGAGTTATACATTGCTTTAAACAAATGATATAAAATAAGTCATTTTTC TAATTAATTATATATTTGCATTTAATAGAAGTTGATAATGAAGTGGATGA AGGGGTGTACGTACAAGCCTGGATGGATCTACTCCCTCTTTTATCCGGAT ATCAACACTTTTTTTTTATTGGACAAAATGTAAGCCTCATTATCAAATGG AAAAATCCAAAGTCAAAGCATCAGCCCAAAGTAGGCTCCTGCTTTGCTTC CTCCGGGAAGAAGGAGTCTCTTCGTCTTACAAACCCTGCTGGTCAATCTG TGCAAAATATATTTCCCTCAAATTTTACATATTATACTTCCAAATCTGGA ATCACAACTGCAACTGCCTCCTTTTTGATGTTTAAATTTGCAAACTCCAA TGAACTTATCCTTAAGTGTCGACTTATTTTTGCATCAAAAGTACCCATTA TATTAGAAGCTAGGGCCGAGAATATTGACGATGATCAGGGCTCTGAARCA AAATTCAACTCTTTAAATCAAGAGATACCTAGTCATTATCTTCGATCCGA TGATTTATCTGCACAAGAGTCAACGCAAGAGCTTCTCGAAATTGAAAGGG ATTTTGAGGAGCCCCTGGTTTGTATGAGTCGCTTAAAGATGGTTTTAGCC TTTGGGGTTTTGATCCTTGTTCTATTTATTGCACTCGTTTTCTCATGTAT GTTATGGTCTCGTGCCAAGTCTTTTACAAGCCAATTGAACTCCAACACAA AGTTTCCTGGTGGACTCATTCCACGCCCTTTTAAGAGAATACCTGGACCC TATGTTGTATCAAGTTTGCCGTATCGATAAACGACTTGGAAGTTATCCTT CCTTATTCATTCAGAGTCTTGAAGAAGAATTGTCTATTTATAATAGGGTT GGGAGTCGTCATGGGACAGCCTCGAGTCTTTAGTCAGTACCTTGCATTTC TTTCTTAATTATTTATACCGTTTTCAAAATATCAAAATATACGACCATGA GATTATAATAAATAATGTTTTACACACATATAGGAGTATCTCATCATTTT AGTAATCTATGTAGCACAGGGATTAACTCTGCGTCAAATTGTTGCTTAGA TTCTCATTCATTAGAATTAGTATTTATTTATTATATATATACATTATGTT ACTTTATTTGCAAAAGTTTTAATTGAATCTTGTTATTGCATGACATTGCG GTACACTGTTGATTATACTGAAGTATGTACAGCCAGGAGTAAGCGTTCTT TGTGCCATATCAATCTACACATAACCTACAATTGACATACATAATACATA TCATTTAAA
back to top
Add to Basket