EMLSAG00000011135, EMLSAG00000011135-693901 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000011135
Unique NameEMLSAG00000011135-693901
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000011135 vs. GO
Match: - (symbol:smyd3 "SET and MYND domain containing 3" species:7955 "Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0060538 "skeletal muscle organ development" evidence=IMP] [GO:0007507 "heart development" evidence=IMP] Pfam:PF00856 InterPro:IPR001214 PROSITE:PS50280 SMART:SM00317 InterPro:IPR002893 ZFIN:ZDB-GENE-051120-138 GO:GO:0007507 Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50865 GO:GO:0060538 GeneTree:ENSGT00530000063077 TreeFam:TF106487 OrthoDB:EOG74XS68 OMA:GLYLDLC EMBL:BX470113 EMBL:BX276083 EMBL:BX276117 EMBL:BX284637 EMBL:BX537319 Ensembl:ENSDART00000105236 PRO:PR:E7EZZ6 Uniprot:E7EZZ6)

HSP 1 Score: 43.1282 bits (100), Expect = 1.553e-4
Identity = 25/104 (24.04%), Postives = 48/104 (46.15%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKYFHPYYYVSYKYCDELIHYDEFLM 104
            M  G R+ ++A+  I + +++ + Y D   P   RR  L++QY F C C+ C+ +  + E L          +  +  L+        S ++ DEL+   + L+
Sbjct:  216 MFEGKRLTLRAVRVIRSAEELTISYTDILAPSKDRRSQLQEQYHFRCECKRCSTEDKDCEMLSGEKSAWTSIKDSIHHLEQLQ-----SEQHWDELLKESQALL 314
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BLAST of EMLSAG00000011135 vs. GO
Match: - (symbol:SMYD2 "N-lysine methyltransferase SMYD2" species:9606 "Homo sapiens" [GO:0000993 "RNA polymerase II core binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0018027 "peptidyl-lysine dimethylation" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0046975 "histone methyltransferase activity (H3-K36 specific)" evidence=IEA] Pfam:PF00856 InterPro:IPR001214 PROSITE:PS50280 SMART:SM00317 InterPro:IPR002893 GO:GO:0005829 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872 Pfam:PF01753 PROSITE:PS50865 GO:GO:0046975 GO:GO:0018027 EMBL:AL929236 UniGene:Hs.66170 HGNC:HGNC:20982 ChiTaRS:SMYD2 EMBL:BC098305 Ensembl:ENST00000415093 NextBio:35533914 Uniprot:I6L9H7)

HSP 1 Score: 42.3578 bits (98), Expect = 2.339e-4
Identity = 21/50 (42.00%), Postives = 27/50 (54.00%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECT 53
            G    V+A+ +I   ++V   YID   P   R   L+D YFF C CQECT
Sbjct:  219 GTLAEVRAVQEIKPGEEVFTSYIDLLYPTEDRNDRLRDSYFFTCECQECT 268
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BLAST of EMLSAG00000011135 vs. GO
Match: - (symbol:An16g04950 "Similarity to hypothetical protein SPBP8B7.07c - Schizosaccharomyces pombe" species:425011 "Aspergillus niger CBS 513.88" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF00856 InterPro:IPR001214 PROSITE:PS50280 SMART:SM00317 EMBL:AM270369 OrthoDB:EOG7DZ8V8 ProteinModelPortal:A2R7W1 STRING:5061.CADANGAP00012721 EnsemblFungi:CADANGAT00012964 HOGENOM:HOG000163094 Uniprot:A2R7W1)

HSP 1 Score: 42.3578 bits (98), Expect = 2.835e-4
Identity = 17/57 (29.82%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:    9 VKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSH 65
            +KAL  I   + + + YID T P  +R+  L+ +Y+F C+C +C+ +  +   +  H
Sbjct:  194 IKALRPIRKDEQIFITYIDVTDPYPIRQANLQSRYYFTCHCSKCSREAASSTAITLH 250
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BLAST of EMLSAG00000011135 vs. GO
Match: - (symbol:An16g04950 species:5061 "Aspergillus niger" [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF00856 InterPro:IPR001214 PROSITE:PS50280 SMART:SM00317 EMBL:AM270369 OrthoDB:EOG7DZ8V8 ProteinModelPortal:A2R7W1 STRING:5061.CADANGAP00012721 EnsemblFungi:CADANGAT00012964 HOGENOM:HOG000163094 Uniprot:A2R7W1)

HSP 1 Score: 42.3578 bits (98), Expect = 2.835e-4
Identity = 17/57 (29.82%), Postives = 32/57 (56.14%), Query Frame = 0 
Query:    9 VKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSH 65
            +KAL  I   + + + YID T P  +R+  L+ +Y+F C+C +C+ +  +   +  H
Sbjct:  194 IKALRPIRKDEQIFITYIDVTDPYPIRQANLQSRYYFTCHCSKCSREAASSTAITLH 250
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BLAST of EMLSAG00000011135 vs. GO
Match: - (symbol:SMYD1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003714 "transcription corepressor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0007507 "heart development" evidence=IEA] [GO:0010831 "positive regulation of myotube differentiation" evidence=IEA] [GO:0035914 "skeletal muscle cell differentiation" evidence=IEA] [GO:0045663 "positive regulation of myoblast differentiation" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214 PROSITE:PS50280 SMART:SM00317 InterPro:IPR002893 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0046872 GO:GO:0006338 GO:GO:0035914 Pfam:PF01753 PROSITE:PS50865 GO:GO:0045663 GO:GO:0010831 GeneTree:ENSGT00530000063077 OMA:VTHGPTH OrthoDB:EOG74XS68 EMBL:AADN03003996 Ensembl:ENSGALT00000025684 Uniprot:F1P5R7)

HSP 1 Score: 41.9726 bits (97), Expect = 4.651e-4
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0 
Query:    6 RVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQEC 52
            R+ ++AL  I+  D++ V Y+D       RRK LK QY+F C C+ C
Sbjct:  233 RIELRALSKISPGDELTVSYVDFLNVSEERRKQLKKQYYFDCTCEHC 279
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592824353|gb|GAXK01130215.1| (TSA: Calanus finmarchicus comp70687_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 1.148e-5
Identity = 26/72 (36.11%), Postives = 36/72 (50.00%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQ--PRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSH--SPCCPK 71
            G  +V  A  +I   ++V  GY  + Q   R  RR +L + Y+F C C  C ED   LEK+  H  + CC K
Sbjct:  871 GSTLVAVASKNICEGEEVTEGYFPSAQMIERPQRRAWLAEHYWFDCQCTACMEDQPTLEKISKHYENFCCQK 1086
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592824354|gb|GAXK01130214.1| (TSA: Calanus finmarchicus comp70687_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.442e-5
Identity = 26/72 (36.11%), Postives = 36/72 (50.00%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQ--PRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSH--SPCCPK 71
            G  +V  A  +I   ++V  GY  + Q   R  RR +L + Y+F C C  C ED   LEK+  H  + CC K
Sbjct: 1543 GSTLVAVASKNICEGEEVTEGYFPSAQMIERPQRRAWLAEHYWFDCQCTACMEDQPTLEKISKHYENFCCQK 1758
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592758603|gb|GAXK01195810.1| (TSA: Calanus finmarchicus comp800924_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 1.009e-4
Identity = 17/47 (36.17%), Postives = 28/47 (59.57%), Query Frame = 0 
Query:    6 RVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQEC 52
            RVVV+A   I + +++ + Y  T Q   +RR+ ++D +FF C C  C
Sbjct:  630 RVVVRAQTPIKSGEEITISYFPTHQGNVVRRQTIQDLWFFTCTCSRC 770
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592758604|gb|GAXK01195809.1| (TSA: Calanus finmarchicus comp800924_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 41.9726 bits (97), Expect = 1.293e-4
Identity = 17/49 (34.69%), Postives = 29/49 (59.18%), Query Frame = 0 
Query:    6 RVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTE 54
            RVVV+A   I + +++ + Y  T Q   +RR+ ++D +FF C C  C +
Sbjct:  624 RVVVRAQTPIKSGEEITISYFPTHQGNVVRRQTIQDLWFFTCTCSRCRD 770
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592840230|gb|GAXK01117314.1| (TSA: Calanus finmarchicus comp303318_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 1.404e-4
Identity = 17/47 (36.17%), Postives = 27/47 (57.45%), Query Frame = 0 
Query:    7 VVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECT 53
            V+ +A   I   ++V   Y    + R +RRK L+D ++F+CNC  CT
Sbjct:  721 VITRAKVPIKKGEEVTFHYTGGLKGRLIRRKALRDGWYFWCNCDRCT 861
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592758605|gb|GAXK01195808.1| (TSA: Calanus finmarchicus comp800924_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 41.5874 bits (96), Expect = 1.929e-4
Identity = 17/49 (34.69%), Postives = 29/49 (59.18%), Query Frame = 0 
Query:    6 RVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTE 54
            RVVV+A   I + +++ + Y  T Q   +RR+ ++D +FF C C  C +
Sbjct:  624 RVVVRAQTPIKSGEEITISYFPTHQGNVVRRQTIQDLWFFTCTCSRCRD 770
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592840231|gb|GAXK01117313.1| (TSA: Calanus finmarchicus comp303318_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 41.2022 bits (95), Expect = 2.321e-4
Identity = 17/47 (36.17%), Postives = 27/47 (57.45%), Query Frame = 0 
Query:    7 VVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECT 53
            V+ +A   I   ++V   Y    + R +RRK L+D ++F+CNC  CT
Sbjct:  243 VITRAKVPIKKGEEVTFHYTGGLKGRLIRRKALRDGWYFWCNCDRCT 383
[Close]
BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592801713|gb|GAXK01152855.1| (TSA: Calanus finmarchicus comp403827_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 40.4318 bits (93), Expect = 4.373e-4
Identity = 20/56 (35.71%), Postives = 32/56 (57.14%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNL 59
            G R+ VKA  DI   +++   Y+D  +P  +R++ L    FF+C C+ C+ DP  L
Sbjct:  265 GFRMCVKASRDIKKGEEITHSYVDAQEPLLIRQELLNLGKFFHCLCERCS-DPTEL 429
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592801714|gb|GAXK01152854.1| (TSA: Calanus finmarchicus comp403827_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 5.222e-4
Identity = 20/56 (35.71%), Postives = 32/56 (57.14%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNL 59
            G R+ VKA  DI   +++   Y+D  +P  +R++ L    FF+C C+ C+ DP  L
Sbjct:  526 GFRMCVKASRDIKKGEEITHSYVDAQEPLLIRQELLNLGKFFHCLCERCS-DPTEL 690
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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Match: gi|592815485|gb|GAXK01139083.1| (TSA: Calanus finmarchicus comp194579_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 38.891 bits (89), Expect = 1.230e-3
Identity = 23/68 (33.82%), Postives = 36/68 (52.94%), Query Frame = 0 
Query:    6 RVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSH--SPCCPK 71
            R+ V+A  DI   +++ + Y+       MR   L+  ++F C+CQ C+ DP    +L SH  S  CPK
Sbjct:  452 RIAVQAQTDIKQGEEIVINYVTFILGTMMRNSKLQKNWYFKCSCQRCS-DPT---ELGSHLSSLRCPK 643
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BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000011135 (pep:novel supercontig:LSalAtl2s:LSalAtl2s756:323617:324153:-1 gene:EMLSAG00000011135 transcript:EMLSAT00000011135 description:"maker-LSalAtl2s756-snap-gene-2.15")

HSP 1 Score: 228.794 bits (582), Expect = 2.756e-78
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKYFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
            MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKYFHPYYYVSYKYCDELIHYDEFLMINELQVL
Sbjct:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKYFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000003016 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1710:69764:70769:1 gene:EMLSAG00000003016 transcript:EMLSAT00000003016 description:"maker-LSalAtl2s1710-snap-gene-0.6")

HSP 1 Score: 147.132 bits (370), Expect = 1.250e-44
Identity = 76/150 (50.67%), Postives = 92/150 (61.33%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLK---------------------------------------YFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
            M IG  +VVKA+CDIANFD+VR+ Y+D TQ R+MR+KFLK+QYFF CNC+ECTEDPLNLEKLKSHSPCCP+ Q L+D  K                                       YFHP+ YV++ YC EL+ YD  L  NELQ+L
Sbjct:   22 MFIGRTLVVKAMCDIANFDEVRISYVDITQTRTMRQKFLKNQYFFDCNCEECTEDPLNLEKLKSHSPCCPQCQNLVDGNKCMSCNKEVDLSQYYQLKEILIKEEEVNVKTCLLFKEVFQYFHPFDYVAFNYCHELVRYDYLLTQNELQIL 171
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000003104 (pep:novel supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 150.214 bits (378), Expect = 8.955e-43
Identity = 71/150 (47.33%), Postives = 91/150 (60.67%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDR---------------------------------------LKYFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
            M  G ++VVKALCDIANFDDVR+ YI   +PRS+R+K L  QYFF C+C+ECT+DPLNLEK+KSHSPCCP+ + LLD                                        LKYFHP+ YVSYK+CD+LI  ++ +  N+LQ+L
Sbjct:  685 MFTGRQIVVKALCDIANFDDVRIAYIGNIEPRSIRQKMLSHQYFFDCDCEECTDDPLNLEKIKSHSPCCPQCKNLLDDDKCINCNKEVNLSRYFKIKEILKNEKEMNAKTCLYFVEVLKYFHPFDYVSYKFCDDLIARNDLIDNNKLQIL 834
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000012244 (pep:novel supercontig:LSalAtl2s:LSalAtl2s8920:373:1847:1 gene:EMLSAG00000012244 transcript:EMLSAT00000012244 description:"maker-LSalAtl2s8920-snap-gene-0.2")

HSP 1 Score: 140.969 bits (354), Expect = 4.045e-41
Identity = 76/150 (50.67%), Postives = 91/150 (60.67%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLK---------------------------------------YFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
            M IG  +VV+ALCDIANF+DVRVGYIDTT+PR  R+  LK++YFF CNC+ECTEDPLNLEKLKSHSPCCP+ Q L+D  K                                       YFHP+ YV++ YC EL+ YD  L  NELQ+L
Sbjct:  155 MFIGRTLVVQALCDIANFEDVRVGYIDTTKPRFNRQILLKNKYFFDCNCEECTEDPLNLEKLKSHSPCCPECQNLVDGNKCMNCNKEVDLSRYYQIKXILIKEEEVNVKTCLLFKEVFQYFHPFDYVAFNYCHELVRYDYLLTQNELQIL 304
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000003017 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1710:87007:87459:1 gene:EMLSAG00000003017 transcript:EMLSAT00000003017 description:"augustus_masked-LSalAtl2s1710-processed-gene-0.0")

HSP 1 Score: 126.716 bits (317), Expect = 7.123e-38
Identity = 56/77 (72.73%), Postives = 68/77 (88.31%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLD 77
            M IG  +VVKA+CDIANFD+VR+ Y+D TQ R+MR+KFLK++YFF CNC+ECTEDPLNLEKLKSHSPCCP+ Q L+D
Sbjct:   61 MFIGRTLVVKAMCDIANFDEVRISYVDITQTRTMRQKFLKNKYFFDCNCEECTEDPLNLEKLKSHSPCCPECQNLVD 137
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000001454 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1247:336907:338618:1 gene:EMLSAG00000001454 transcript:EMLSAT00000001454 description:"augustus_masked-LSalAtl2s1247-processed-gene-2.0")

HSP 1 Score: 119.398 bits (298), Expect = 9.803e-34
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLK 80
            M  G  + VKALC+IANFDDVRV Y+D ++PRS+R++ LK+QYFF CNC+EC EDPLNLEKLKSHSPCCP+ Q LLD  K
Sbjct:  199 MFNGHTLXVKALCEIANFDDVRVAYVDMSKPRSIRQELLKNQYFFDCNCEECAEDPLNLEKLKSHSPCCPECQHLLDGTK 278
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000000651 (pep:novel supercontig:LSalAtl2s:LSalAtl2s11005:51:981:-1 gene:EMLSAG00000000651 transcript:EMLSAT00000000651 description:"maker-LSalAtl2s11005-snap-gene-0.1")

HSP 1 Score: 116.316 bits (290), Expect = 1.619e-32
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLD 77
            M IG  +VVKA+CDIANF++VRVGYI  T+PR  R+  LK++YFF CNC+ECTEDPLNLEKLKSHSPCCP+ Q L+D
Sbjct:  199 MFIGRTLVVKAMCDIANFENVRVGYIVITKPRFNRQILLKNKYFFDCNCEECTEDPLNLEKLKSHSPCCPECQNLVD 275
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000008836 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5500:3079:4247:-1 gene:EMLSAG00000008836 transcript:EMLSAT00000008836 description:"maker-LSalAtl2s5500-snap-gene-0.4")

HSP 1 Score: 85.1149 bits (209), Expect = 4.592e-21
Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKY 81
            + IG + VVKALCDIANFDDVRV Y       S+R+++L++Q+ F CNC ECT +P N + +K   P CPKYQ LLD  ++
Sbjct:  199 LWIGRKFVVKALCDIANFDDVRVAYKGNLG--SLRQEWLZNQHIFDCNCDECTNNPFNRKDVKLTCPYCPKYQHLLDGSRF 277
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000001552 (pep:novel supercontig:LSalAtl2s:LSalAtl2s126:27302:27668:1 gene:EMLSAG00000001552 transcript:EMLSAT00000001552 description:"maker-LSalAtl2s126-snap-gene-0.3")

HSP 1 Score: 55.4546 bits (132), Expect = 1.716e-11
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    2 LIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQEC 52
            +I  ++VVKAL +I NF+D RVGYIDTT+PR  R+  LK++YF     +  
Sbjct:    8 MIRNKLVVKALFEIPNFEDGRVGYIDTTKPRFKRQMLLKNKYFLIVTAENV 58
[Close]
BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Match: EMLSAP00000002794 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1613:87683:89928:-1 gene:EMLSAG00000002794 transcript:EMLSAT00000002794 description:"snap_masked-LSalAtl2s1613-processed-gene-0.6")

HSP 1 Score: 58.5362 bits (140), Expect = 2.062e-11
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLKYFHPYYYVSYKYCDELIHYDEFLMINELQVL 111
            M IG  +VVKALCDIANFDD     +D +Q   ++   +K +        E      +L K               +  KYFHP+ YV++ YC+ L+ Y + L +NELQ+L
Sbjct:  164 MFIGRTLVVKALCDIANFDD----EVDLSQYYQIKEILMKKK--------EVDAKSRSLLK---------------EVFKYFHPFDYVAFYYCNALLSYKDLLTLNELQIL 247
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BLAST of EMLSAG00000011135 vs. SwissProt
Match: gi|82176673|sp|Q7ZXV5.1|SMY2A_XENLA (RecName: Full=N-lysine methyltransferase SMYD2-A; AltName: Full=Histone methyltransferase SMYD2-A; AltName: Full=SET and MYND domain-containing protein 2A)

HSP 1 Score: 50.447 bits (119), Expect = 2.818e-7
Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECT---EDPLNLEKLKSHSPCCPKYQRLLDRLKY 81
            G    ++A+ +I   D+V   YID   P   R   L D YFF C+C+EC+   +DP  LE  K   P  P +Q + D +KY
Sbjct:  217 GTVAEIRAVQEIHAGDEVFTSYIDLLYPTEDRNDRLMDSYFFTCDCRECSTKQKDPAKLEIRKLSDP--PSHQTVKDMIKY 295
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BLAST of EMLSAG00000011135 vs. nr
Match: gi|290562039|gb|ADD38416.1| (SET and MYND domain-containing protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 128.642 bits (322), Expect = 3.287e-34
Identity = 62/80 (77.50%), Postives = 66/80 (82.50%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRLK 80
            M IG  +VVKALCDIANFDDVRV Y D TQPR MRR FLKDQYFF C C+ECTEDPLNLEKLKSHSPCCP+ Q L+D  K
Sbjct:  199 MFIGRTLVVKALCDIANFDDVRVTYTDITQPRRMRRNFLKDQYFFDCTCEECTEDPLNLEKLKSHSPCCPECQNLVDGNK 278
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BLAST of EMLSAG00000011135 vs. nr
Match: gi|225711848|gb|ACO11770.1| (SET and MYND domain-containing protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 130.183 bits (326), Expect = 7.431e-34
Identity = 74/155 (47.74%), Postives = 91/155 (58.71%), Query Frame = 0 
Query:    1 MLIGCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHSPCCPKYQRLLDRL---------------------------------------KYFHPYYYVSYKYCDELI-----HYDEFLMINELQVL 111
            M  G  +VVKALC+IANFDDVRV Y+D +QPRS+R++ LK+Q+FF CNC+EC EDPLNLEKLKSHSPCCP+ Q LLD                                         KYFH + YVS KYC+ELI     +Y+E    NELQ++
Sbjct:  199 MFNGHTLVVKALCEIANFDDVRVAYVDMSQPRSIRQELLKNQFFFDCNCEECAEDPLNLEKLKSHSPCCPECQHLLDGTKCMNCNQEVDLARYYQIKEILIKEKKVNAKTSLYFKEVCKYFHSFDYVSLKYCNELIAIHRSNYNE----NELQII 349
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BLAST of EMLSAG00000011135 vs. nr
Match: gi|682255840|gb|KFX86155.1| (hypothetical protein O988_09738, partial [Pseudogymnoascus sp. VKM F-3808])

HSP 1 Score: 52.373 bits (124), Expect = 5.512e-7
Identity = 22/60 (36.67%), Postives = 33/60 (55.00%), Query Frame = 0 
Query:    7 VVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTEDPLNLEKLKSHS 66
             V+ AL  I   +++ + YIDT QPR+ R+ FL++ Y+F C C  CT        +K  S
Sbjct:    1 AVLTALTHIKEDEEITISYIDTMQPRAARQAFLQEHYYFTCTCPACTTSSTPPSAVKPGS 60
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BLAST of EMLSAG00000011135 vs. nr
Match: gi|1101387326|dbj|GAU95935.1| (hypothetical protein RvY_07453 [Ramazzottius varieornatus])

HSP 1 Score: 56.225 bits (134), Expect = 6.526e-7
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:    4 GCRVVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECTE 54
            G  ++V A+ +IA  DDVRV Y D  QP  +RR++LK+QYFF+C C  C +
Sbjct:  204 GPDMLVYAIDEIAALDDVRVTYADLNQPTRLRRQYLKEQYFFHCECVGCQD 254
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BLAST of EMLSAG00000011135 vs. nr
Match: gi|682398711|gb|KFY76084.1| (hypothetical protein V499_04099 [Pseudogymnoascus sp. VKM F-103] >gi|1040514527|gb|OBT53874.1| hypothetical protein VE04_04758 [Pseudogymnoascus sp. 24MN13])

HSP 1 Score: 53.1434 bits (126), Expect = 7.615e-7
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    7 VVVKALCDIANFDDVRVGYIDTTQPRSMRRKFLKDQYFFYCNCQECT 53
             V+ AL  I   ++V + YIDTTQPR+ R+ FL++ Y+F C C  CT
Sbjct:   44 AVLTALKHIEEGEEVTISYIDTTQPRAARQAFLQEHYYFTCTCPACT 90
The following BLAST results are available for this feature:
BLAST of EMLSAG00000011135 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-1.553e-424.04symbol:smyd3 "SET and MYND domain containing 3" sp... [more]
-2.339e-442.00symbol:SMYD2 "N-lysine methyltransferase SMYD2" sp... [more]
-2.835e-429.82symbol:An16g04950 "Similarity to hypothetical prot... [more]
-2.835e-429.82symbol:An16g04950 species:5061 "Aspergillus niger"... [more]
-4.651e-440.43symbol:SMYD1 "Uncharacterized protein" species:903... [more]

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BLAST of EMLSAG00000011135 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592824353|gb|GAXK01130215.1|1.148e-536.11TSA: Calanus finmarchicus comp70687_c1_seq2 transc... [more]
gi|592824354|gb|GAXK01130214.1|1.442e-536.11TSA: Calanus finmarchicus comp70687_c1_seq1 transc... [more]
gi|592758603|gb|GAXK01195810.1|1.009e-436.17TSA: Calanus finmarchicus comp800924_c0_seq3 trans... [more]
gi|592758604|gb|GAXK01195809.1|1.293e-434.69TSA: Calanus finmarchicus comp800924_c0_seq2 trans... [more]
gi|592840230|gb|GAXK01117314.1|1.404e-436.17TSA: Calanus finmarchicus comp303318_c2_seq3 trans... [more]
gi|592758605|gb|GAXK01195808.1|1.929e-434.69TSA: Calanus finmarchicus comp800924_c0_seq1 trans... [more]
gi|592840231|gb|GAXK01117313.1|2.321e-436.17TSA: Calanus finmarchicus comp303318_c2_seq2 trans... [more]
gi|592801713|gb|GAXK01152855.1|4.373e-435.71TSA: Calanus finmarchicus comp403827_c0_seq2 trans... [more]
gi|592801714|gb|GAXK01152854.1|5.222e-435.71TSA: Calanus finmarchicus comp403827_c0_seq1 trans... [more]
gi|592815485|gb|GAXK01139083.1|1.230e-333.82TSA: Calanus finmarchicus comp194579_c1_seq1 trans... [more]

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BLAST of EMLSAG00000011135 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 10
Match NameE-valueIdentityDescription
EMLSAP000000111352.756e-78100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s756:32361... [more]
EMLSAP000000030161.250e-4450.67pep:novel supercontig:LSalAtl2s:LSalAtl2s1710:6976... [more]
EMLSAP000000031048.955e-4347.33pep:novel supercontig:LSalAtl2s:LSalAtl2s174:36423... [more]
EMLSAP000000122444.045e-4150.67pep:novel supercontig:LSalAtl2s:LSalAtl2s8920:373:... [more]
EMLSAP000000030177.123e-3872.73pep:novel supercontig:LSalAtl2s:LSalAtl2s1710:8700... [more]
EMLSAP000000014549.803e-3468.75pep:novel supercontig:LSalAtl2s:LSalAtl2s1247:3369... [more]
EMLSAP000000006511.619e-3270.13pep:novel supercontig:LSalAtl2s:LSalAtl2s11005:51:... [more]
EMLSAP000000088364.592e-2151.85pep:novel supercontig:LSalAtl2s:LSalAtl2s5500:3079... [more]
EMLSAP000000015521.716e-1149.02pep:novel supercontig:LSalAtl2s:LSalAtl2s126:27302... [more]
EMLSAP000000027942.062e-1135.14pep:novel supercontig:LSalAtl2s:LSalAtl2s1613:8768... [more]
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BLAST of EMLSAG00000011135 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
gi|82176673|sp|Q7ZXV5.1|SMY2A_XENLA2.818e-737.04RecName: Full=N-lysine methyltransferase SMYD2-A; ... [more]
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BLAST of EMLSAG00000011135 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000011135 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 5
Match NameE-valueIdentityDescription
gi|290562039|gb|ADD38416.1|3.287e-3477.50SET and MYND domain-containing protein 3 [Lepeopht... [more]
gi|225711848|gb|ACO11770.1|7.431e-3447.74SET and MYND domain-containing protein 3 [Lepeopht... [more]
gi|682255840|gb|KFX86155.1|5.512e-736.67hypothetical protein O988_09738, partial [Pseudogy... [more]
gi|1101387326|dbj|GAU95935.1|6.526e-749.02hypothetical protein RvY_07453 [Ramazzottius varie... [more]
gi|682398711|gb|KFY76084.1|7.615e-746.81hypothetical protein V499_04099 [Pseudogymnoascus ... [more]
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BLAST of EMLSAG00000011135 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s756supercontigLSalAtl2s756:323617..324153 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s756-snap-gene-2.15
Biotypeprotein_coding
EvidenceIEA
NoteSET and MYND domain-containing protein 3 [Lepeophtheirus salmonis]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000011135 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000011135EMLSAT00000011135-706982Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s756:323617..324153-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000011135-693901 ID=EMLSAG00000011135-693901|Name=EMLSAG00000011135|organism=Lepeophtheirus salmonis|type=gene|length=537bp|location=Sequence derived from alignment at LSalAtl2s756:323617..324153- (Lepeophtheirus salmonis)
ATTACTCATGTAGACCAAATGCAGTTTATATGCTCATTGGTTGTAGAGTA
GTTGTTAAAGCTCTGTGTGATATTGCTAATTTTGATGATGTAAGAGTAGG
TTATATAGATACCACTCAGCCACGGAGCATGAGACGAAAATTTCTAAAAG
ATCAATATTTTTTTTATTGTAACTGCCAAGAATGTACTGAAGATCCACTG
AATCTTGAGAAGTTAAAATCTCATAGTCCATGCTGTCCCAAATATCAACG
TTTATTGGATAGTAATAAATGCATGAACTGTAATATAATTAAGCTAAATA
TCAAATAGTTGAGAATGTTTTAAAGGATTTCATTTTATCCTAGGAAGTGG
ATTTGTCTCGATATTATCAAATAAAATAAATTTTGGATGAASTATAAAGA
AGATAATGCAAATACACAATTGTGTTTGAAAAGAAGGGTTGAAGTATTTT
CATCCCTATTACTATGTATCTTATAAGTATTGTGATGAACTGATACATTA
TGACGAATTTCTAATGATAAATGAATTACAAGTTTTG
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