EMLSAG00000011399, EMLSAG00000011399-694165 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754565|gb|GAXK01199848.1| (TSA: Calanus finmarchicus comp181056_c0_seq4 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.038e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1129 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1269
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754567|gb|GAXK01199846.1| (TSA: Calanus finmarchicus comp181056_c0_seq2 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.041e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1145 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1285
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754564|gb|GAXK01199849.1| (TSA: Calanus finmarchicus comp181056_c0_seq5 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.072e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1114 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1254
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754566|gb|GAXK01199847.1| (TSA: Calanus finmarchicus comp181056_c0_seq3 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.076e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1130 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1270
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754559|gb|GAXK01199854.1| (TSA: Calanus finmarchicus comp181056_c0_seq10 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.117e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1093 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1233
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754562|gb|GAXK01199851.1| (TSA: Calanus finmarchicus comp181056_c0_seq7 transcribed RNA sequence) HSP 1 Score: 38.891 bits (89), Expect = 1.121e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1109 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1249
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754558|gb|GAXK01199855.1| (TSA: Calanus finmarchicus comp181056_c0_seq11 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 1.186e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1078 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1218
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754560|gb|GAXK01199853.1| (TSA: Calanus finmarchicus comp181056_c0_seq9 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 1.190e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1094 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1234
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754568|gb|GAXK01199845.1| (TSA: Calanus finmarchicus comp181056_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 1.224e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1148 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1288
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Match: gi|592754561|gb|GAXK01199852.1| (TSA: Calanus finmarchicus comp181056_c0_seq8 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 1.245e-2 Identity = 24/68 (35.29%), Postives = 32/68 (47.06%), Query Frame = 0 Query: 151 ARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPT 218 R+ S DDG RL I +V PEDKG Y C Y G N +++ + I F+P+FP Sbjct: 1096 TRMRSDDDG---RLTITRVRPEDKGVYRC-----------------YAVGGN-EEDFMEIHFFPKFPV 1236
BLAST of EMLSAG00000011399 vs. L. salmonis peptides
Match: EMLSAP00000011399 (pep:novel supercontig:LSalAtl2s:LSalAtl2s788:261718:270151:1 gene:EMLSAG00000011399 transcript:EMLSAT00000011399 description:"maker-LSalAtl2s788-snap-gene-2.15") HSP 1 Score: 457.988 bits (1177), Expect = 4.639e-165 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 1 MNLSFIIFILILNQCELRHGYSPQCDEEWNCGYTGGQEEEDKPSSQESSSFRFFFPPGGDSAYYGRPNLPSYNTYPGISQAXPYTPLNNNNYYTPFYGRYGPSGGGGQDGLDGYAEEFLHLLLILQEYATIASGRLNWYASYLQVEMVSRARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPTFSTNC 223 MNLSFIIFILILNQCELRHGYSPQCDEEWNCGYTGGQEEEDKPSSQESSSFRFFFPPGGDSAYYGRPNLPSYNTYPGISQAXPYTPLNNNNYYTPFYGRYGPSGGGGQDGLDGYAEEFLHLLLILQEYATIASGRLNWYASYLQVEMVSRARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPTFSTNC Sbjct: 1 MNLSFIIFILILNQCELRHGYSPQCDEEWNCGYTGGQEEEDKPSSQESSSFRFFFPPGGDSAYYGRPNLPSYNTYPGISQAXPYTPLNNNNYYTPFYGRYGPSGGGGQDGLDGYAEEFLHLLLILQEYATIASGRLNWYASYLQVEMVSRARIDSTDDGKMSRLIIYKVLPEDKGTYACETWSFLNEDWSSENPYNYFQGNNVQKELLTIDFYPQFPTFSTNC 223 The following BLAST results are available for this feature:
BLAST of EMLSAG00000011399 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000011399 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000011399 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000011399 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000011399 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000011399 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000011399 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s788:261718..270151+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000011399-694165 ID=EMLSAG00000011399-694165|Name=EMLSAG00000011399|organism=Lepeophtheirus salmonis|type=gene|length=8434bp|location=Sequence derived from alignment at LSalAtl2s788:261718..270151+ (Lepeophtheirus salmonis)back to top Add to Basket
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