EMLSAG00000012360, EMLSAG00000012360-695126 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:ATF4 "Activating transcription factor 4" species:9823 "Sus scrofa" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0043565 GO:GO:0003700 GeneTree:ENSGT00530000063801 OMA:GECRELE TreeFam:TF316136 OrthoDB:EOG72JWGW EMBL:CU424445 EMBL:HM991499 UniGene:Ssc.37849 Ensembl:ENSSSCT00000000090 Uniprot:E3VJQ3) HSP 1 Score: 52.373 bits (124), Expect = 2.119e-6 Identity = 43/124 (34.68%), Postives = 58/124 (46.77%), Query Frame = 0 Query: 185 SIDSIFENPSATP-VSTLSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 S DS +P +P S SP+ S SP + S + Y E + K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K L+ E+ Sbjct: 220 SPDSYLGSPQHSPSTSRASPSRSL-----LSPGAPCGSVRPKPYDPPGEKVVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDLIEEV 338
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:ATF4 "Cyclic AMP-dependent transcription factor ATF-4" species:9913 "Bos taurus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IEA] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006094 GO:GO:0005667 GO:GO:0070059 GeneTree:ENSGT00530000063801 OMA:GECRELE TreeFam:TF316136 OrthoDB:EOG72JWGW EMBL:DAAA02014689 Ensembl:ENSBTAT00000023213 Uniprot:F1MXZ1) HSP 1 Score: 50.0618 bits (118), Expect = 1.319e-5 Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 0 Query: 196 TPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNR-KENTKGGRQKLAIK------DKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 +P S+L + + SP S+ SP ++R K G + +A K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K L+ E+ Sbjct: 220 SPDSSLGSPQDSPSTSRGSPNKSLLSPGALSGSSRPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDLIEEV 338
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:Atf4 "Cyclic AMP-dependent transcription factor ATF-4" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0005815 "microtubule organizing center" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISS] [GO:0034976 "response to endoplasmic reticulum stress" evidence=ISS] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISS] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:621863 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0003677 GO:GO:0043267 GO:GO:0007214 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0006094 GO:GO:0005815 GO:GO:0005667 GO:GO:0070059 GO:GO:0032590 CTD:468 eggNOG:NOG325856 HOGENOM:HOG000004844 HOVERGEN:HBG004301 KO:K04374 GeneTree:ENSGT00530000063801 OMA:GECRELE OrthoDB:EOG72JWGW EMBL:AF252627 RefSeq:NP_077379.1 UniGene:Rn.2423 ProteinModelPortal:Q9ES19 SMR:Q9ES19 BioGrid:249453 PhosphoSite:Q9ES19 PRIDE:Q9ES19 DNASU:79255 Ensembl:ENSRNOT00000065304 GeneID:79255 KEGG:rno:79255 UCSC:RGD:621863 InParanoid:Q9ES19 NextBio:614744 PRO:PR:Q9ES19 ArrayExpress:Q9ES19 Genevestigator:Q9ES19 Uniprot:Q9ES19) HSP 1 Score: 49.6766 bits (117), Expect = 1.645e-5 Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 0 Query: 202 SPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGG-----RQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 SP++S A PP S+ SP + + K G + K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K L+ E+ Sbjct: 233 SPSTSRA------PPDSLPSPGVPRGSRPKPYDPPGVSVTAKVKTEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDLIEEV 337
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:Atf4 "activating transcription factor 4" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO;ISS] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005815 "microtubule organizing center" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=IEA;ISO] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISO;ISS] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=ISO] [GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=IDA] [GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0032590 "dendrite membrane" evidence=IDA] [GO:0034976 "response to endoplasmic reticulum stress" evidence=ISO;ISS] [GO:0043267 "negative regulation of potassium ion transport" evidence=IMP] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISO;ISS] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 RGD:621863 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0003677 GO:GO:0043267 GO:GO:0007214 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0006094 GO:GO:0005815 GO:GO:0005667 GO:GO:0070059 GO:GO:0032590 CTD:468 eggNOG:NOG325856 HOGENOM:HOG000004844 HOVERGEN:HBG004301 KO:K04374 GeneTree:ENSGT00530000063801 OMA:GECRELE OrthoDB:EOG72JWGW EMBL:AF252627 RefSeq:NP_077379.1 UniGene:Rn.2423 ProteinModelPortal:Q9ES19 SMR:Q9ES19 BioGrid:249453 PhosphoSite:Q9ES19 PRIDE:Q9ES19 DNASU:79255 Ensembl:ENSRNOT00000065304 GeneID:79255 KEGG:rno:79255 UCSC:RGD:621863 InParanoid:Q9ES19 NextBio:614744 PRO:PR:Q9ES19 ArrayExpress:Q9ES19 Genevestigator:Q9ES19 Uniprot:Q9ES19) HSP 1 Score: 49.6766 bits (117), Expect = 1.645e-5 Identity = 40/111 (36.04%), Postives = 55/111 (49.55%), Query Frame = 0 Query: 202 SPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGG-----RQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 SP++S A PP S+ SP + + K G + K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K L+ E+ Sbjct: 233 SPSTSRA------PPDSLPSPGVPRGSRPKPYDPPGVSVTAKVKTEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDLIEEV 337
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:Atf4 "activating transcription factor 4" species:10090 "Mus musculus" [GO:0003677 "DNA binding" evidence=ISO;IGI;IDA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IMP] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IMP;IDA] [GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA] [GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=ISO] [GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0032590 "dendrite membrane" evidence=ISO] [GO:0034976 "response to endoplasmic reticulum stress" evidence=ISO;IDA] [GO:0043267 "negative regulation of potassium ion transport" evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISO] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IMP] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 MGI:MGI:88096 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0003677 GO:GO:0043267 GO:GO:0007214 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0006094 GO:GO:0005815 GO:GO:0005667 EMBL:CH466550 GO:GO:0070059 GO:GO:0032590 CTD:468 eggNOG:NOG325856 HOVERGEN:HBG004301 KO:K04374 GeneTree:ENSGT00530000063801 OMA:GECRELE TreeFam:TF316136 OrthoDB:EOG72JWGW ChiTaRS:ATF4 EMBL:L13791 EMBL:M94087 EMBL:AK138657 EMBL:AK144777 EMBL:AK146193 EMBL:AK156298 EMBL:BC085169 RefSeq:NP_001274109.1 RefSeq:NP_033846.2 UniGene:Mm.641 ProteinModelPortal:Q06507 SMR:Q06507 BioGrid:198235 DIP:DIP-30969N IntAct:Q06507 PhosphoSite:Q06507 PRIDE:Q06507 Ensembl:ENSMUST00000109605 GeneID:11911 KEGG:mmu:11911 UCSC:uc007wvl.1 NextBio:279981 PRO:PR:Q06507 ArrayExpress:Q06507 Bgee:Q06507 CleanEx:MM_ATF4 Genevestigator:Q06507 Uniprot:Q06507) HSP 1 Score: 49.2914 bits (116), Expect = 2.536e-5 Identity = 39/112 (34.82%), Postives = 55/112 (49.11%), Query Frame = 0 Query: 202 SPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIK------DKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 SP++S A PP ++ SP + + R + L K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K L+ E+ Sbjct: 234 SPSTSRA------PPDNLPSPGGSRGSPRPKPYDPPGVSLTAKVKTEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDLIEEV 339
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:ATF4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=IEA] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006094 GO:GO:0005667 GO:GO:0070059 CTD:468 KO:K04374 GeneTree:ENSGT00530000063801 OMA:GECRELE TreeFam:TF316136 OrthoDB:EOG72JWGW EMBL:AAEX03007308 RefSeq:XP_859677.1 Ensembl:ENSCAFT00000002053 GeneID:474503 KEGG:cfa:474503 Uniprot:F1PLQ2) HSP 1 Score: 48.521 bits (114), Expect = 3.696e-5 Identity = 35/95 (36.84%), Postives = 48/95 (50.53%), Query Frame = 0 Query: 213 FSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 SP S S + Y E T + K+ DKK +K QN AA RYR KKR + + KEL+KKN LKE+ + E+ +K L+ E+ Sbjct: 248 LSPGSLCGSARPKPYDPPGEKT--AKVKVEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEV 340
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:ATF4 "Cyclic AMP-dependent transcription factor ATF-4" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005815 "microtubule organizing center" evidence=IEA] [GO:0006094 "gluconeogenesis" evidence=ISS] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISS] [GO:0006520 "cellular amino acid metabolic process" evidence=TAS] [GO:0006987 "activation of signaling protein activity involved in unfolded protein response" evidence=TAS] [GO:0007214 "gamma-aminobutyric acid signaling pathway" evidence=IEA] [GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=TAS] [GO:0032590 "dendrite membrane" evidence=IEA] [GO:0034976 "response to endoplasmic reticulum stress" evidence=IDA] [GO:0043267 "negative regulation of potassium ion transport" evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0044267 "cellular protein metabolic process" evidence=TAS] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS;NAS;IDA;IMP] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISS] Reactome:REACT_17015 InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005737 GO:GO:0005654 GO:GO:0006520 GO:GO:0006987 GO:GO:0044267 GO:GO:0043525 GO:GO:0003677 GO:GO:0043267 GO:GO:0007214 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006094 GO:GO:0005815 GO:GO:0005667 GO:GO:0006366 GO:GO:0070059 GO:GO:0032590 EMBL:AL022312 CTD:468 eggNOG:NOG325856 HOGENOM:HOG000004844 HOVERGEN:HBG004301 KO:K04374 OMA:GECRELE TreeFam:TF316136 EMBL:D90209 EMBL:M86842 EMBL:BC008090 EMBL:BC011994 EMBL:BC024775 EMBL:BC073990 PIR:A45377 RefSeq:NP_001666.2 RefSeq:NP_877962.1 RefSeq:XP_005261675.1 UniGene:Hs.496487 PDB:1CI6 PDBsum:1CI6 ProteinModelPortal:P18848 SMR:P18848 BioGrid:106958 DIP:DIP-207N DIP:DIP-354N IntAct:P18848 MINT:MINT-146610 STRING:9606.ENSP00000336790 PhosphoSite:P18848 DMDM:116241262 PaxDb:P18848 PRIDE:P18848 DNASU:468 Ensembl:ENST00000337304 Ensembl:ENST00000396680 Ensembl:ENST00000404241 GeneID:468 KEGG:hsa:468 UCSC:uc003axz.3 GeneCards:GC22P039916 HGNC:HGNC:786 HPA:CAB011596 HPA:HPA036934 MIM:604064 neXtProt:NX_P18848 PharmGKB:PA25086 InParanoid:P18848 OrthoDB:EOG72JWGW PhylomeDB:P18848 ChiTaRS:ATF4 EvolutionaryTrace:P18848 GeneWiki:ATF4 GenomeRNAi:468 NextBio:1935 PRO:PR:P18848 ArrayExpress:P18848 Bgee:P18848 CleanEx:HS_ATF4 Genevestigator:P18848 Uniprot:P18848) HSP 1 Score: 47.3654 bits (111), Expect = 8.046e-5 Identity = 40/123 (32.52%), Postives = 56/123 (45.53%), Query Frame = 0 Query: 185 SIDSIFENPSATPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 S +S +P +P + SP S SP S + Y E + K DKK +K QN AA RYR KKR + + KEL+KKN LKE+ + E+ +K L+ E+ Sbjct: 224 SPESYLGSPQHSPSTRGSPNRSLP-----SPGVLCGSARPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQYLKDLIEEV 341
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:ATF4 "Cyclic AMP-dependent transcription factor ATF-4" species:9913 "Bos taurus" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005815 "microtubule organizing center" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISS] [GO:0034976 "response to endoplasmic reticulum stress" evidence=ISS] [GO:0043525 "positive regulation of neuron apoptotic process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=ISS] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISS] [GO:0070059 "intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress" evidence=ISS] InterPro:IPR004827 Pfam:PF00170 PROSITE:PS00036 PROSITE:PS50217 SMART:SM00338 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0043525 GO:GO:0003677 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005815 GO:GO:0070059 EMBL:BC102236 RefSeq:NP_001029514.1 UniGene:Bt.49442 ProteinModelPortal:Q3ZCH6 SMR:Q3ZCH6 PRIDE:Q3ZCH6 GeneID:509107 KEGG:bta:509107 CTD:468 eggNOG:NOG325856 HOGENOM:HOG000004844 HOVERGEN:HBG004301 InParanoid:Q3ZCH6 KO:K04374 NextBio:20868824 Uniprot:Q3ZCH6) HSP 1 Score: 47.3654 bits (111), Expect = 9.816e-5 Identity = 40/119 (33.61%), Postives = 58/119 (48.74%), Query Frame = 0 Query: 196 TPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNR-KENTKGGRQKLAIK------DKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL 307 +P S+L + + SP S+ SP ++R K G + +A K DKK +K QN AA RYR KKR + + KEL+KKN LKEK + E+ +K + E+ Sbjct: 220 SPDSSLGSPQDSPSTSRGSPNKSLLSPGALSGSSRPKPYDPPGEKMVAAKVKGEKLDKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKEKADSLAKEIQYLKDQIEEV 338
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:atfs-1 species:6239 "Caenorhabditis elegans" [GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IMP] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 EMBL:Z77136 GO:GO:0034514 UniGene:Cel.17407 GeneID:179922 KEGG:cel:CELE_ZC376.7 CTD:179922 PIR:T27532 RefSeq:NP_506515.1 ProteinModelPortal:Q23272 IntAct:Q23272 MINT:MINT-3386033 EnsemblMetazoa:ZC376.7a.1 EnsemblMetazoa:ZC376.7a.2 UCSC:ZC376.7a.1 WormBase:ZC376.7a eggNOG:NOG315681 HOGENOM:HOG000017580 InParanoid:Q23272 OMA:NHYLESD NextBio:907412 ArrayExpress:Q23272 Uniprot:Q23272) HSP 1 Score: 46.595 bits (109), Expect = 2.119e-4 Identity = 28/98 (28.57%), Postives = 59/98 (60.20%), Query Frame = 0 Query: 213 FSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMI 310 ++P S P++H+ K +G K ++ ++ +R++ N AA RYR+KKR + +++ +E+ +N L +K R+++ E+++MKK + ++G I Sbjct: 393 WTPASDDYFPEEHQ----KFKKRGVVLKPSVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMKKELRKMGAI 486
BLAST of EMLSAG00000012360 vs. GO
Match: - (symbol:atfs-1 "Protein ATFS-1, isoform a" species:6239 "Caenorhabditis elegans" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0034514 "mitochondrial unfolded protein response" evidence=IMP] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] InterPro:IPR004827 Pfam:PF07716 PROSITE:PS50217 SMART:SM00338 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 EMBL:Z77136 GO:GO:0034514 UniGene:Cel.17407 GeneID:179922 KEGG:cel:CELE_ZC376.7 CTD:179922 PIR:T27532 RefSeq:NP_506515.1 ProteinModelPortal:Q23272 IntAct:Q23272 MINT:MINT-3386033 EnsemblMetazoa:ZC376.7a.1 EnsemblMetazoa:ZC376.7a.2 UCSC:ZC376.7a.1 WormBase:ZC376.7a eggNOG:NOG315681 HOGENOM:HOG000017580 InParanoid:Q23272 OMA:NHYLESD NextBio:907412 ArrayExpress:Q23272 Uniprot:Q23272) HSP 1 Score: 46.595 bits (109), Expect = 2.119e-4 Identity = 28/98 (28.57%), Postives = 59/98 (60.20%), Query Frame = 0 Query: 213 FSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMI 310 ++P S P++H+ K +G K ++ ++ +R++ N AA RYR+KKR + +++ +E+ +N L +K R+++ E+++MKK + ++G I Sbjct: 393 WTPASDDYFPEEHQ----KFKKRGVVLKPSVDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMKKELRKMGAI 486
BLAST of EMLSAG00000012360 vs. C. finmarchicus
Match: gi|592785815|gb|GAXK01168753.1| (TSA: Calanus finmarchicus comp1141_c0_seq1 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 3.714e-4 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 245 DKKERKKWQNVEAARRYRDKKRDQVNEYQXXXXXXXXXXXXXXXXXREVENELSTMKKLMTELGMIKVVQ 314 +KKERKK QN AA RYR+KK+ + + + + L KN LK+KL E+E E +KKLMTE G+ + Q Sbjct: 1175 EKKERKKAQNRTAAFRYREKKKSEQDIIDDELELLSTKNNVLKDKLTEMETEFKYLKKLMTEAGLGRYAQ 1384
BLAST of EMLSAG00000012360 vs. C. finmarchicus
Match: gi|592785813|gb|GAXK01168755.1| (TSA: Calanus finmarchicus comp1141_c1_seq1 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 3.825e-4 Identity = 33/70 (47.14%), Postives = 45/70 (64.29%), Query Frame = 0 Query: 245 DKKERKKWQNVEAARRYRDKKRDQVNEYQXXXXXXXXXXXXXXXXXREVENELSTMKKLMTELGMIKVVQ 314 +KKERKK QN AA RYR+KK+ + + + + L KN LK+KL E+E E +KKLMTE G+ + Q Sbjct: 434 EKKERKKAQNRTAAFRYREKKKSEQDIIDDELELLSTKNNVLKDKLTEMETEFKYLKKLMTEAGLGRYAQ 643
BLAST of EMLSAG00000012360 vs. C. finmarchicus
Match: gi|592926320|gb|GAXK01032114.1| (TSA: Calanus finmarchicus comp21486_c2_seq2 transcribed RNA sequence) HSP 1 Score: 31.5722 bits (70), Expect = 4.541e+0 Identity = 15/37 (40.54%), Postives = 22/37 (59.46%), Query Frame = 0 Query: 235 KGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNE 271 K G ++LA + ++ KW+NVE R YR KK+ E Sbjct: 1950 KKGPKQLAKNEVQDEGKWKNVERCRDYRSKKKSTTAE 2060
BLAST of EMLSAG00000012360 vs. C. finmarchicus
Match: gi|592926321|gb|GAXK01032113.1| (TSA: Calanus finmarchicus comp21486_c2_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 5.700e+0 Identity = 14/35 (40.00%), Postives = 22/35 (62.86%), Query Frame = 0 Query: 237 GRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNE 271 G ++L+ K+ ++ KW+NVE R YR KK+ E Sbjct: 1974 GPKQLSKKEVQDEGKWKNVERCRDYRSKKKSTTAE 2078
BLAST of EMLSAG00000012360 vs. L. salmonis peptides
Match: EMLSAP00000012360 (pep:novel supercontig:LSalAtl2s:LSalAtl2s903:209876:211074:-1 gene:EMLSAG00000012360 transcript:EMLSAT00000012360 description:"maker-LSalAtl2s903-augustus-gene-1.52") HSP 1 Score: 647.121 bits (1668), Expect = 0.000e+0 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 Query: 1 MKLSDMEAYYPQETTAGRQKAALGLSLGFSPNLHLDHNPHFQDFLSSTIDLGSFEVFQDVDLPFEGLDTIEEVESCEEHRPTSDSLSLERTQQFIEEMDIFIKEHEENYPMTPCMQSPDPKVSLQSSESVDDETKEAVQMLDSLINGDIGLEWREPNDCQSTTKSENSSYVLSLENIPDISNLSSIDSIFENPSATPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKVVQK 315 MKLSDMEAYYPQETTAGRQKAALGLSLGFSPNLHLDHNPHFQDFLSSTIDLGSFEVFQDVDLPFEGLDTIEEVESCEEHRPTSDSLSLERTQQFIEEMDIFIKEHEENYPMTPCMQSPDPKVSLQSSESVDDETKEAVQMLDSLINGDIGLEWREPNDCQSTTKSENSSYVLSLENIPDISNLSSIDSIFENPSATPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKVVQK Sbjct: 1 MKLSDMEAYYPQETTAGRQKAALGLSLGFSPNLHLDHNPHFQDFLSSTIDLGSFEVFQDVDLPFEGLDTIEEVESCEEHRPTSDSLSLERTQQFIEEMDIFIKEHEENYPMTPCMQSPDPKVSLQSSESVDDETKEAVQMLDSLINGDIGLEWREPNDCQSTTKSENSSYVLSLENIPDISNLSSIDSIFENPSATPVSTLSPASSTATLXDFSPPSSVTSPKQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKVVQK 315
BLAST of EMLSAG00000012360 vs. L. salmonis peptides
Match: EMLSAP00000000509 (pep:novel supercontig:LSalAtl2s:LSalAtl2s107:551831:553780:-1 gene:EMLSAG00000000509 transcript:EMLSAT00000000509 description:"maker-LSalAtl2s107-snap-gene-5.20") HSP 1 Score: 56.9954 bits (136), Expect = 1.833e-10 Identity = 27/73 (36.99%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 238 RQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMI 310 R K ++++++ KKWQN+EAARRYRD+K+ ++ + K L+ N L +K+ ++N++S +KK+++ LG++ Sbjct: 39 RGKRTLQERRKIKKWQNIEAARRYRDRKKLEMETSVTQVKILEAANKQLYDKMDLLQNKVSNLKKILSRLGLL 111
BLAST of EMLSAG00000012360 vs. Select Arthropod Genomes
Match: XP_006562898.1 (PREDICTED: activating transcription factor of chaperone isoform X2 [Apis mellifera]) HSP 1 Score: 53.1434 bits (126), Expect = 3.628e-7 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 242 AIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL----GMIK 311 +I+DKK RKK QN AA RYR KK+ ++ E + +EL + N LK ++ +++ E+ +K LM +L G+IK Sbjct: 217 SIEDKKVRKKEQNKNAATRYRQKKKQEIKEILGEERELTEHNEKLKNQVTDLQREIGYLKGLMRDLFKAKGLIK 290
BLAST of EMLSAG00000012360 vs. Select Arthropod Genomes
Match: gb|EEC08628.1| (hypothetical protein IscW_ISCW019219 [Ixodes scapularis]) HSP 1 Score: 53.1434 bits (126), Expect = 3.876e-7 Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0 Query: 224 QHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIK 311 Q + RK G R +ERK+ QN +AA RYR KK+ + + + + +EL + N NLK + V NE+S +K LM EL K Sbjct: 261 QQQRRKRKAADAGSR--------RERKRLQNKDAATRYRRKKKQECDVVEEEFQELSRINDNLKAEAARVGNEVSYLKGLMRELFRAK 340
BLAST of EMLSAG00000012360 vs. Select Arthropod Genomes
Match: XP_393709.3 (PREDICTED: activating transcription factor of chaperone isoform X1 [Apis mellifera]) HSP 1 Score: 52.373 bits (124), Expect = 8.139e-7 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 0 Query: 242 AIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTEL----GMIK 311 +I+DKK RKK QN AA RYR KK+ ++ E + +EL + N LK ++ +++ E+ +K LM +L G+IK Sbjct: 284 SIEDKKVRKKEQNKNAATRYRQKKKQEIKEILGEERELTEHNEKLKNQVTDLQREIGYLKGLMRDLFKAKGLIK 357
BLAST of EMLSAG00000012360 vs. nr
Match: gi|919058551|ref|XP_013411151.1| (PREDICTED: cyclic AMP-dependent transcription factor ATF-4-like [Lingula anatina]) HSP 1 Score: 61.6178 bits (148), Expect = 2.584e-7 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 194 SATPVSTLSPASSTATLXD--FSPPSSVTSPKQ----HKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKVVQK 315 S S LSP S ++ D F S +SP + T R ++ G + K DKK RKK QN AA RYR KKR++ + Q ++ EL+ N LK K+ E+E E+ MK+LM E+ M K + K Sbjct: 177 STVDTSVLSPGSDFSSEDDELFVQKRSRSSPYSTDPDYTVTPRVKSHSGKKPKTL--DKKLRKKEQNKTAALRYRLKKREETEQLQAEADELESHNGVLKGKVEELEREIKYMKELMKEVYMAKGLIK 302
BLAST of EMLSAG00000012360 vs. nr
Match: gi|919047686|ref|XP_013407036.1| (PREDICTED: activating transcription factor of chaperone-like [Lingula anatina]) HSP 1 Score: 61.6178 bits (148), Expect = 2.732e-7 Identity = 49/128 (38.28%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 194 SATPVSTLSPASSTATLXD--FSPPSSVTSP----KQHKYTNRKENTKGGRQKLAIKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKVVQK 315 S S LSP S ++ D F S +SP + T R ++ G + K DKK RKK QN AA RYR KKR++ + Q ++ EL+ N LK K+ E+E E+ MK+LM E+ M K + K Sbjct: 177 STVDTSVLSPGSDFSSEDDELFVQKRSRSSPYSTDPDYTVTPRVKSHSGKKPKTL--DKKLRKKEQNKTAALRYRLKKREETEQLQAEADELESHNGVLKGKVEELEREIKYMKELMKEVYMAKGLIK 302
BLAST of EMLSAG00000012360 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold263_size232787-snap-gene-1.27 (protein:Tk11207 transcript:maker-scaffold263_size232787-snap-gene-1.27-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100905060 isoform 1") HSP 1 Score: 97.8265 bits (242), Expect = 1.856e-23 Identity = 94/284 (33.10%), Postives = 134/284 (47.18%), Query Frame = 0 Query: 69 TIEEVESCEEHRPTSDSLSLERTQQFIEEMDIFIKEHEENYPMTPCMQSPDPKVSLQSSESVDDETKEAVQMLDSLINGDIGLEWREPND-CQSTTKSENSSYVLSLENIPD------------ISN-------------LSSIDSIFENPSATPVSTL----------SPASSTATL-XDFSPPSSVTSPKQHKYTNRKENTKGGRQKLA---IKDKKERKKWQNVEAARRYRDKKRDQVNEYQLKSKELKKKNTNLKEKLREVENELSTMKKLMTELGMIKV 312 TIEEV SL+ + TQQ I EM+ F+ HE C SP+ S+ ++D+ Q+LD L+NG++ + + P D +T K + +S+ N+ + I+N S + E S TP S L SPA S T D+SP S PK R +G ++ A +KDKKERKK QNVEAARRYRDKK+ + + +L K N +LK ++ ++E E+ T+KKLM ELG+IK Sbjct: 113 TIEEV-----------SLASDDTQQLIAEMEDFLVAHE-------CQASPEAPESIADEPAMDNN-----QVLDDLMNGNVAI--KSPEDHAINTFKDMEQTLGMSINNVSEFMTEDGQKIVIVIANDLSSNVPSPSPSLSRSQSPLAEAASPTPSSLLTASPRSMGSQSPAYSDDTADSDWSPAQSDLRPKM----TRNRANRGPYKRPAQYNVKDKKERKKLQNVEAARRYRDKKKVEQITIEDVEGDLMKTNESLKSQMSDLEGEVKTLKKLMLELGLIKA 367 The following BLAST results are available for this feature:
BLAST of EMLSAG00000012360 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 17
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BLAST of EMLSAG00000012360 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000012360 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000012360 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000012360 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 3
BLAST of EMLSAG00000012360 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000012360 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s903:209876..211074- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000012360-695126 ID=EMLSAG00000012360-695126|Name=EMLSAG00000012360|organism=Lepeophtheirus salmonis|type=gene|length=1199bp|location=Sequence derived from alignment at LSalAtl2s903:209876..211074- (Lepeophtheirus salmonis)back to top Add to Basket
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