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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1003 | supercontig | LSalAtl2s1003:13254..18935 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000004 >EMLSAP00000000004 ID=EMLSAP00000000004|Name=EMLSAP00000000004|organism=Lepeophtheirus salmonis|type=polypeptide|length=522bp
MDTKIKVVTKTAPQQELANSSNIIIGHLNNLNKLKFSDISKKVGSLITED
AWDYGIKTLNPAPTDTISLNLNKVILAALPTKCSRHNTPSHAHSITKILQ
NLNFGHQESHQIFILCEKHNAFASGCAVARAYPSYSRKTGTQVTKKLVNV
EFILANDRNPISGDEARSIEHAIFGIQTAARIVDTPCNEMHVNTFIEEVK
NIAKKLGITPLIIQGKELEERGMGGIYGVGKAAENPPALVVLSHTPKSAT
LNVAWVGKGIVYDTGGLSIKGKTAMPGMKRDCGGAAGILGAFYSAVKNGF
NQNLHALFCLAENSVGPNATRPDDIHVLYSGKTVEINNTDAEGRLVVSDG
VVYAQKDLKADIIVDVCTLTGSQGVATGNVHAAFLTNNYEWESKTLTAGR
SSGDLTFPLVYCPEVHFSEFNSMVADMKNSVADRSNATSSCAGLFINAHL
GFNFPGTWLHVDMASPAYTGERATGYGVALLNTLFGDHMNALLLKNSVTS
LKEFDAENYQDTIQPKKIKLSV back to topmRNA from alignment at LSalAtl2s1003:13254..18935+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000004-695851 ID=EMLSAT00000000004-695851|Name=EMLSAT00000000004|organism=Lepeophtheirus salmonis|type=mRNA|length=5682bp|location=Sequence derived from alignment at LSalAtl2s1003:13254..18935+ (Lepeophtheirus salmonis)
GAAAAGGTTGTATATGTTAATTTTTTCCTGGAATAACAAGGAAAACCTCT
AAAAGTAGATATAGTAATTTTATTGTAGCGCCCTCTATGCTTGTAACCTC
CCAACAAGTATGGATTGCTTGAGGGCGCTCAATTGTGTGTACCTGTGGCA
GTCTGGCATATAATGACGGAGGKTCTGTGACGTTGAGAGTGTATTCAAGT
GCTAAAAATAGGGGATGCATTTTTTCCCCCCCTTCCTTTCTCAATCCTAA
CAATGAGCCGTGATCCACATGATCGAACACGTCAAGCACCAAGAGACGAG
GAGGAAGAGGATCTTGTAGATCGTATGCTGAATAAGACAGGGTGTATGAA
TCTTCATTATCAAGTTCAATTTTGTATGGCGGAAAAAAAGGATTGGAGGC
TTTGTCAGAAGGAAGTCCAAGATTTTAAGTCCTGTATGAATCGTGATAAA
AATGGTGGAAGTTCATCCTAATTTCCTCTCCGACTGGGTCTCTACGAGTT
ACTTGATTGATGAAGAAGAAGATGAAAAAGATGATCAGTATATTCCAAAG
TACATTCAAAAATAATATCATATGGAATTTAATTTTTCTTATTATATTAA
ATAAATTAGTTAATAGTCGTCATTTAAAGTAGAGGATAATTATGTTTGAT
TAATAAATACCACTTTTCTTCAAACAAACGGAGGTCCGTCCGTTATTTAT
TGGCTCATTTTGTATAAAAAGATTAATAGATTATATTTAGTATATATTAA
TTAATTAATCCATCATTTATGATAGTGAAGGCAAAAAAATCATAAGTATC
GCCCTTATCAGCTTGGAAATTTATCTTAAATTAATATTGATTCCTTTTCA
AATATGAACTGCTTGGGTTATTCCACATTTTTTGTTTCTATAGAAGAATT
GATGAAATATTATTTGTTCAAATAAACCTTTTTAGAAATGAAATAATAGC
CTATCCATGACTCCTTATTAATATTATGTCAATTATATTCCAATCTATTT
TTTATAGGTGGTGGAAAAACCAACTTATGATCATGTTTGTGGGTATTCTC
TGCGGAGTCTTTGTAAATGCATTCCTTCGAAGATCTGCCTCCTCATCCCT
TTCTCAAAACTCGCGTCACTTTTTGAGTAACTTATTTAAAAGTACAAAAA
TGGTGTTTTTAGTCCGTACGGACATAGGCATGGGAAAGGGGAAAATTGCT
TCTCAAGTTGCACATGCTGCCATACTCTGCTATCAAGATGCTCAAAGGAA
AAAATCCGACCATTTGAACAACTGGGAATACACGGGTCAAATGAAGGTTG
TTTTAAAGTGTTCTGATGAAGCAGAGTTTGATAGATTATATACGGAAGCC
AAAAATTTGGGCCTCATTACTAGTGTCGTAAAAGATGCTGGTAGAACGCA
AATTCCTCATGGAACTAAAACTGTCGTTGGAATTGGACCTGGCCCATTGG
AAGTGATAGATAAGATAACTGGGCATTTAAAATTATATTGAATCGTCAAA
TATTGTTACGTGGAGTTACGCAATTATTTGATTTGTTCTCATCATTGCCT
GAATATGCTTTGAATAAAAAAACATTTTCTTGAACTTTGGCCTTTGCTAT
ATTTTCTTGTTTTTCCTATTCTCAAGAATTCAATTGAGGATTGTACAGTA
CTCATATGAAAAATCTTCAATTTTTTTGTCTTCTCTTATTTACAAAAATA
ATTATCCGTGTTCCACTTATTTTAAAGATAATGATAAGAAACAAATATAA
CACGCCTTCATCTAAACATTTACAAAAAATATTAAGTAATTCATTTTACT
CTATTGAAGGTCTGATATGGATACAAAAATCAAAGTTGTAACAAAAACAG
CTCCCCAACAGGAGCTGGCAAACTCCTCGAATATCATCATAGGGCATCTA
AATAATTTAAATAAACTTAAGTTTTCTGATATTTCAAAAAAGGTTGGAAG
TCTTATTACAGAAGATGCTTGGGACTATGGTATCAAGACTCTCAATCCCG
CTCCAACTGATACTATAAGTCTTAATTTAAATAAAGTGATTCTCGCTGCT
CTACCTACCAAGTGTTCTCGTCACAATACTCCTTCTCATGCGCACTCAAT
TACTAAAATTTTACAGAATTTGAATTTTGGTCATCAAGAGAGTCATCAAA
TTTTTGTGAGTTTTTTTTTTTTTTACAAATATCAGTGATAAATTTTCTTT
GATAAGAGATATATTACATTTTTAGATTTTGTGTGAAAAGCACAATGCAT
TTGCTTCTGGATGTGCCGTGGCCAGAGCGTACCCCTCATATTCTCGAAAA
ACTGGGACTCAAGTTACTAAGAAATTGGTGAATGTTGAATTTATTCTTGC
TAATGATAGAAACCCCATTTCTGGAGATGAGGCCCGATCAATTGAGCATG
CCATTTTTGGAATTCAAACTGCTGCAAGAATTGTTGATACTCCGTGCAAT
GAGATGCATGTCAATACATTTATTGAAGTGATTATTTTATTCAGATTTTT
AATAGATAGTAATTAACACATATTTATTATATTTTTTAAGGAAGTAAAAA
ATATTGCTAAGAAACTTGGAATCACACCCTTGATTATTCAAGGCAAAGAA
CTTGAAGAAAGAGGAATGGGAGGTATTTATGGTGTTGGAAAAGCTGCTGA
GAATCCTCCTGCTCTTGTGGTCTTGAGCCATACGCCTAAATCTGCAACTT
TAAATGTAGCTTGGGTTGGAAAAGGGATTGTGTATGATACTGGTGGTCTT
TCCATCAAGGTTATTACTTAAATAATTGTTGCTGCTAGCGTTCTAGATTA
CAAACTTTTTTCGTATAGGGTAAAACGGCCATGCCAGGAATGAAGAGAGA
TTGCGGAGGAGCTGCAGGAATTCTTGGAGCATTTTATTCTGCAGTAAAAA
ATGGATTTAATCAGAACCTTCATGCTCTTTTTTGTTTGGCTGAAAATTCA
GTCGGACCTAACGCAACGAGACCGGACGATATTCATGTATTGTACTCTGG
TAAAACGGTAGAGATAAACAATACAGATGCCGAGGGAAGACTTGTAGTAT
CTGATGGCGTGGTTTACGCTCAGAAGGACTTAAAAGCTGATATTATTGTG
GATGTGTGTACACTGACTGGGTCACAAGGAGTTGCTACCGGCAATGTACA
TGCTGCTTTTTTAACCAATAATTATGAATGGGAATCAAAAACTTTAACTG
CGGGACGTAGTTCTGGAGACTTGACTTTTCCACTCGTCTATTGTCCTGAA
GTTCATTTTTCAGAATTTAATTCTATGGTTGCTGATATGAAGAATTCTGT
TGCCGTGAGTTGAAGCTTTTTTCATTTACTCGCATGATTAACTTATTTTT
TACATCTCTTAGGATCGAAGTAATGCTACGTCCTCTTGTGCAGGACTTTT
TATAAATGCCCACTTGGGATTCAACTTTCCTGGTACATGGCTTCATGTGG
ACATGGCATCTCCCGCATACACGGGTGAAAGAGCAACAGGTTATGGAGTT
GCTCTATTAAATACATTGTTTGGAGACCATATGAATGCACTTTTGTTGAA
AAACTCTGTGACTTCGTTAAAGGAATTCGATGCAGAAAATTATCAAGATA
CTATTCAACCCAAGAAAATAAAACTAAGCGTTTAGATTTTAAAACATATA
AATGTAGTTTTGAATATATTCAATTTTTCCTCTTTTTTTTGTATGGTGTA
AGGAATAATTTTTGCTACTATGGTAATACCCATTAATTATTAGTTAGTTT
TGCTTCACTGTTTCCAACAAGTAGTTACATTTAATTCTAAATTCTAATGC
TTATTGTGTGTTCAATACATATCTTAATGAATTTAGGGTAACCACATAGG
CTTGCTTTTTTTATTTAAAATTTGATTGACGAATATATTTTTTTTATTAA
TAAATAAATGAAAGTAAACTATTCAAGTCTCAATTATCCATTTATATCTT
ATCAATATACAATGACTACTAATATCTATTTGGTAACTGCATGCATGGCC
TGAGCTAAGTGTCCGACATTGGAAGAAGAAATACCAGCAACAGAAATACG
GCCATCTTTGGTCAAATATACACTGTGGTCACTTATAATTTTTGCTACTT
GTTCAGGCTTCATTCCCGTAAAACAAAACATACCAATTTGTTCTGTAATA
TGATTCCAGTTGTGGGATGAACCCTCTTTCTCTAAGCCCTCTTTGAGTTG
ATGTCTCATTTTGATGATTCTGTCAGCCATTCCTTTGACATCACTTAACC
TAAAATTAATATCCACAGAATTAAAATTTATTCGAATAACTATGAACTCT
TTTTAGTAATCACCACTCTTGTCTTAGAGTAGGATCAGAAAGAATTTCAG
ACACTACTCTTGCTCCGTGGATGGGAGGATTAGAATACATGGGTCTAATT
AGGATCTTGATTTGGGATGCTACTCGTGCTGCTTCTTCTTTGTCATTACA
AACCACACTAAAGGCTCCTATACGTTCACCGTATAGGCCCATATTTTTGG
CATAAGATTGTGATAGACAAATATTATGTCCATCATTCAAAAATTGCCTG
ACAGCAAATGCGTCACCATCAACGTTTCCTGATGCAAAGCCTTGATAAGC
CATATCAAAGAAAACATACAAATTCCTTTCTTTAATCAAAGTCGAGAGTT
CTTTCCATTGGGTGGGTTTAGGATCTACACCGGTTGGATTGTGGGCACAT
GCATGAAGAAGGATCACACTTTTTTCCGGGATTCTCTAATAATAAGAATA
TTAATAGTCCGAAAGTAAGACAATACAAAAGCAATTCATTTCAATTACCT
TAATATCCTCACATGTACCCTCGAAATCAAAACCACATGTATTTGGATCA
TAGTATCTGTAACTGGCTACTTCCATCCCGCAATGTTTAAAAATAGGTGT
ATGATTTCCCCAAGATGGCTTTGGCAAGTACACTGTTTTTTTTCCGGGAA
ACCATTTAGAGAGGTATGCAGCTCCAATTCTGAGAGCACCTGTACCAGAA
ATTGCCTGCGTTGTAATGTGACGTCCCTCAGCGACAAATTCAGAACCAAA
TGCAAGCTCAGCGGAAAGCTTGTTAAATGTAGCATCACCAACAATTGTGC
TGTATTCATGGTTCATATTGGCATTAAATATTTTTTCTTCGGCCTTGCGA
ACGGATGGAAGAATAAAGGGCTTTCCTTCATCATCTCGATAAGCTCCCAC
GCCCAAATTCATTTTTTTGGGATTTGAATCCTTTTTAAACAATTCAGTGA
CTCCTAAAATTGCATCTGGTGGGCCCATTTCAACCCCTGTCCACCAAGAT
CTAGGATGAATAAAGAAAATTATTGACTTGGAATTGGGAGTGAAAACGAT
TTCTTCCTTTCTTCAATTTTTAAATGACTTTTGTTAAAAATGATTTGAAT
CCCTAATAGTGACATAATTGTATTTGTTCATAAGTGGACTAAATATTAGT
AGACACTTATTAAGTCTACTCTATTTATGTCATATTTTATTAAAAGCGTA
GCTGTACATTGGTTGTTTCAGACCACAAATAGTTACATAATTTTTTTATA
AAAGCATGTGTAAATTGAATATGGAAATCTACTAAATTCAGATCTATTTC
TCTTTTGATAAATTGCTGTTAAATGTCAAACGAATTACTGTTTGCCCAAA
AATGAAACCAACAAACGAGAAGTAGAATTCAG back to top
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