EMLSAT00000000022, EMLSAT00000000022-695869 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000022
Unique NameEMLSAT00000000022-695869
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1004supercontigLSalAtl2s1004:92038..93364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000022 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000022EMLSAG00000000022-682788Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000000088EMLSAE00000000088-709016Lepeophtheirus salmonisexon
EMLSAE00000000089EMLSAE00000000089-709017Lepeophtheirus salmonisexon
EMLSAE00000000090EMLSAE00000000090-709018Lepeophtheirus salmonisexon
EMLSAE00000000091EMLSAE00000000091-709019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771915auto771915Lepeophtheirus salmonispolypeptide
EMLSAP00000000022EMLSAP00000000022Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000022

>EMLSAP00000000022 ID=EMLSAP00000000022|Name=EMLSAP00000000022|organism=Lepeophtheirus salmonis|type=polypeptide|length=201bp
MPDPSIDNIISSNPPPHHFPYTPRQAPPFTHQRPFYPRFPRGQQLSRQRS
LEGGFPSSASSSASSTAGGAPEDNIPRHHSRDLYPRVLVSEGESRDQCTP
LFDPETGQPSLNGGGNQNRRRMMGLHYRRNDSLSSDQSECVRPPPPKPHK
RKTHLHHPHSEKGLILLSSSEEELQSTPDCTTSCEEFESESISEKDSQNM
N
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mRNA from alignment at LSalAtl2s1004:92038..93364-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000022-695869 ID=EMLSAT00000000022-695869|Name=EMLSAT00000000022|organism=Lepeophtheirus salmonis|type=mRNA|length=1327bp|location=Sequence derived from alignment at LSalAtl2s1004:92038..93364- (Lepeophtheirus salmonis)
ATGCCGGATCCCAGCATCGACAATATCATATCATCAAACCCTCCTCCTCA
CCATTTTCCATATACACCTCGTCAAGCACCGCCATTTACTCATCAACGAC
CATTTTATCCAAGGTAAGAAAATGTACTTAATCCACAATAGCGTTTTTTT
CCGGGATCCCGTTGTCTCAGAATTTACACCAATGGGAAATCATTCATTTC
ATTATTTCATAATATAGGCTTAATTTAAACTAAAAATTAAGCCATAAATA
TAAACATATGTCCGGTAATTGATTTGTAAACTGTTCCATGACGTCACATA
TGTTTCATATTTATATTTATTTAGAGTGTTTTTGAAGTGGTATGAAATGT
TGCATTTTAAATATCTATTATTTTTATCAAATGAATTACAGTGATACGGT
AGTTGACTTTTAGCCGAGACTCGGTAAAGAAATGAGAACCCGCGTGCTCA
CTAATTCTATTGTATTGACTAAATTAACTAAGATATCTTTAATTCTCAAC
AGATTCCCTCGAGGACAACAGCTATCGAGACAAAGATCTCTTGAGGGAGG
ATTTCCATCATCAGCCTCATCTTCTGCTTCGTCCACAGCTGGAGGTGGTA
TSCATCATCTKCCATCATCAATTATRCCARCCCCAKCAGCCTCTATCTCC
TCTAATAGAGGAGGTACGCCACGCCGTTTAAGTGAGGGAGAACCACCTCG
WTTGTTTCGRTATCCATATCAGCATYGAGGCGGCAGCCGCATGCCTCCRC
CAAGTTATCGTAMGCGCCATCCTCCATCATCTTGGGGTCGAGAATCTCTC
TCAGCCCCTGAAGACAACATTCCGCGTCATCATAGTCGTGATCTGTATCC
TCGAGTTCTTGTCTCAGAAGGAGAATCCAGGGATCAATGTACTCCTTTAT
TTGATCCCGAAACGGGTCAACCATCACTCAATGGTGGTGGAAATCAAAAT
CGGCGTCGGATGATGGGACTTCATTACCGAAGAAATGACTCACTTTCATC
GGATCAAAGTGAGTGTGTCCGACCACCGCCCCCAAAGCCCCACAAACGAA
AGACMCATCTTCATCACCCCCATTCAGAAAAAGGACTCATACTGCTTTCA
TCTTCAGAGGAGGAGCTACAATCCACACCTGACTGCACAACATCATGCGA
AGAATTTGAAAGTGAATCCATTTCCGAAAAAGGTAAGAGGTTGAGGGGTT
TTTATTTAATTATATATATAATAATGTTCCGTTGAAGCACGTCTCTTCTC
CATAAGAAGGAGAATATATGTACATATTTGCCTTTTGTTTCCTTTTGCAT
TCGTTAGATTCCCAAAATATGAATTGA
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