EMLSAT00000000320, EMLSAT00000000320-696167 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000320
Unique NameEMLSAT00000000320-696167
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1049supercontigLSalAtl2s1049:49286..50380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000320 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000320EMLSAG00000000320-683086Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000001481EMLSAE00000001481-710409Lepeophtheirus salmonisexon
EMLSAE00000001482EMLSAE00000001482-710410Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770621auto770621Lepeophtheirus salmonispolypeptide
EMLSAP00000000320EMLSAP00000000320Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000320

>EMLSAP00000000320 ID=EMLSAP00000000320|Name=EMLSAP00000000320|organism=Lepeophtheirus salmonis|type=polypeptide|length=111bp
FIFSLFARKNKIIPRGFSLVIWTPDKDFHSIVVVGEVYHVIEDDLYIDIG
HKFPCVCRKPRNNSENFRRGVKVRVLIKSLELSQKFLGYENEMTLMEADG
VLLGLYSKSSS
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mRNA from alignment at LSalAtl2s1049:49286..50380-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000320-696167 ID=EMLSAT00000000320-696167|Name=EMLSAT00000000320|organism=Lepeophtheirus salmonis|type=mRNA|length=1095bp|location=Sequence derived from alignment at LSalAtl2s1049:49286..50380- (Lepeophtheirus salmonis)
TTTATTTTTTCTCTTTTCGCTCGTAAAAATAAAATAATACCGCGAGGTTT
CTCTCTTGTAATATGGACTCCAGACAAAGATTTCCATAGTATAGTATATA
TATTTTCTAGATTTGGGAAATTATACATAACTATACCATTGAAACAATTT
CAATACACTATATTTTTTACTATTAAATAATAAGATTACACTATTGATTT
TCGAAATATAAGGTAAATGTCAATCTGATTTGTTCTTTATATATATTGAT
TAGAATGCTCACACTATCTGATTAATTTATTATAACTATAAAAAATCAGA
TATCATAAGCATTCATATATATTATTTGAATGTAAGAGGCCAAGAAATTA
ATTTGAGGAATATTAAAAAATCATGAAAATCTAATTAGTTGTTAGAGGTT
GCGTTATAATTTAAGTAAAGGACTGTTACAACTAAATAAGGTTCACGATA
AAAAATATATTTCATTTGGCAACTCTTATTTTGTATAAACAAAATTGTAA
ACAAACATAGTCAACACACGGGGAAGTTGATTGTTTATTAATAAATAATA
AAATTAATTATTAATTTTTATACTTTAATAATATAATCGAAATGTCTCTC
CGCACTAGTTTATCCACCTTGTGTAGACGACTGTCTCTTCGACATCCATC
ATCACGTCTACCCTCTAGTGCAGCTTTTTCCTCAGAGTCGGCTCCRGCTC
AGGAAGAAAAGACTCCGGAAAAGAAATCATCTTCCTTTGCTTCCCMCCTA
CGCCAATCATCATGGATCCAAATGGGTGATCCCAAGGGCAAGGTAATATC
TGAAGTGATAACTAATAAATAGATCCATCATCATTTGTAATATCACCACT
AGGTTGTCGTTGGAGAAGTATATCACGTTATAGAAGACGATTTGTATATT
GACATTGGCCATAAATTCCCCTGCGTGTGTCGTAAGCCTCGAAATAACTC
CGAAAATTTCCGTCGGGGTGTAAAAGTGAGAGTTCTGATCAAATCTCTGG
AATTGTCTCAAAAGTTTCTGGGTTATGAGAATGAAATGACGCTAATGGAG
GCGGATGGTGTCCTTCTTGGCCTCTACTCCAAATCTTCTTCATGA
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