EMLSAT00000000527, EMLSAT00000000527-696374 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000527
Unique NameEMLSAT00000000527-696374
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1081supercontigLSalAtl2s1081:72973..76122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000527 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000527EMLSAG00000000527-683293Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002285EMLSAE00000002285-711213Lepeophtheirus salmonisexon
EMLSAE00000002286EMLSAE00000002286-711214Lepeophtheirus salmonisexon
EMLSAE00000002287EMLSAE00000002287-711215Lepeophtheirus salmonisexon
EMLSAE00000002288EMLSAE00000002288-711216Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771444auto771444Lepeophtheirus salmonispolypeptide
EMLSAP00000000527EMLSAP00000000527Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000527

>EMLSAP00000000527 ID=EMLSAP00000000527|Name=EMLSAP00000000527|organism=Lepeophtheirus salmonis|type=polypeptide|length=332bp
MNQTQSMISLHPLSSPPPQSSSTLLPQLGTIPSSLSPESLSKTHEEFDLI
DSTSAPLTVKQLSLSEESLNSEPKAKSLSPAKEQEAFNPSETPYRGVLQA
PVTVLLKDEFQVHEAREANSEEIVGSLRGLRKEIDKLLIDEEDRKSTPES
SSSKCTLAKMDSSGNDSTCPYDLIKVLSFEESGEEFPSDKLELKPCSEED
SEPRETPALDNGNVIDQEDKDKPNHGKPESSSYSMIPLEEETQKVLHKPT
KTSYDYVPAYCPRTRNLLNESSVYSLKYNQSPYLTTTQKVSDSLEQMKAM
GFSDDDGWLTQLLTMERGDIDKVLDILTPVNK
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mRNA from alignment at LSalAtl2s1081:72973..76122+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000527-696374 ID=EMLSAT00000000527-696374|Name=EMLSAT00000000527|organism=Lepeophtheirus salmonis|type=mRNA|length=3150bp|location=Sequence derived from alignment at LSalAtl2s1081:72973..76122+ (Lepeophtheirus salmonis)
ATAAATTTTACTTTACAGTTCATCGTATTCATTGAGAGGTTTTTTTGTTT
TTGTTCAATAAAAAGAGTGCTTTGTAAAGAAAAGGGTGTGGCATTAAGAA
CATGCAGGCCTCAGGCCCCAAAGCTCTGGTTATTAAACTTATTTTTGAAT
ACCAAGGAGAGCGTTCTAATAGTCCAAAAATAAGAAAGCTTGTGCTAGAA
GAAGGAGAGACGCCGACTCTGGGCTTCTTATGTGAATCTTTTTCTTTAAA
AAGCTCGCAAACATTTTATTACTACGATGATGACGGGGATCAAATAACTA
TATCCAATGATCGAGAGCTTCTGACAGCCATCAAGGAAAAGGTAATATTT
CTACCTAGAAAGGTCCTTAATCGTTTTTTATAACCTCTATACTTTAATTT
AGAAGTCCTCTGATACACTAAGGCTCTATACAGGAACAGAGCTTATTCCA
GGAGATATTCCGAGTAAAAGGAACCATGAGAAAGATATTTTTGAAGAGAT
TTGTACCAATTGTCAGAACCGAATCGGTCGATTCTCTTATAAATGTGTTA
TTTGTAGCGGTGTGGATTTATGTGGTCGGTATGATAAATAATAAATTAAT
CCCTTAACTACAGCAATATCCCGAGCAGTACGGATATTTAATTCCGCATA
CATAGATACGAGTGCGGTCTGAAAAGTTTCCGACCTCAACCTAAAGATTG
CAGTAAATAAAAGTGTTCGTTTGAGGCAGTGATGGTCCCATCTCTCTAAC
CCGTCCTGTCTGTAACTTTGCTGGGAGAAGTGTGTAGAGTAACAAGGAGA
CTATGTTAAAAAATACGAATTTTGTCCACAAAACCACTCACATCAACTCA
ATCAAACGATTGTTATATAACAACACCGCGTCCAAAATGTCCGAAACTTT
GGTGAGTAACTGTCTACAGATTTTAGACAGATGGCACTAGCTTTTATATA
CGAGTGCTGCCATCTTCATGTTGAGGTTGGAAACTTTTNNNNNNNNNNNT
TTCGTGCTTTATTAAATGCACCATCTAATGAAAGGCAAAAGGATGAGGAT
AATGCAATTTTTTTTTGTCTTAAAATGCCAGGAATATTCGATTATTTCTT
ATATACTATGGCTATTTGCGGATTAAACCGGGTATTTCTATGTATACAAA
ATTATTTTCTCAGATGACGACATCACATATATANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAACTATGAGCTATCTTTTTTNGCTGCCATCTTCATGTTGAGGT
TGGAAACTTTTCAGATATTCTTTTTCGTGCTTTATTAAATGCACCATCTA
ATGAAAGGCAAAAGGATGAGGATAATGCAATTTTTTTTTGTCTTAAAATG
CCAGGAATATTCGATTATTTCTTATATACTATGGCTATTTGCGGATTAAA
CCGGGTATTTCTATGTATACAAAATTATTTTCTCAGATGACGACATCACA
TATATAACCTGTTACTAATGTGACAAAATTCTAATGACGACGACGACGTC
ATAATATGAATATGTTAATATTAGTTCTATTGCAGGTGTGAAGCCTTCGG
AGTGCACTCGACTCATGATATAATACGATTATCAAATGAGAAGACGTATC
CATCCCAGTTCTTCATGCGGTTGCATAGGTGTGTAAGGTGTTATCGTCTT
AGTAATTATTTGTATTACTTTTATGTGAATGTACGTACACGTTGAATCAA
GTCTTGATGACATAATCAAAGCTCCATAGCTACATGTACAATGTTATAAA
TTTAAAATGAAAAAAATTAGCCTTAATAGTGCGTAAAAATAACTTTGTTC
AAGTTTTTGAGTTGACGTAGTTTAAATTCCTTTGATTCAAGTCGAAAAAA
CAATAAGTATTAGAGAGTATAATGCATTTTATTGAAATAAATAATATATT
TGCTTCTCCTGACTACAGATTATATGATAAAATGAATCAAACACAGTCCA
TGATTTCTCTCCATCCTCTTTCCTCKCCKCCGCCACAGTCATCATCTACA
CTTCTACCACAACTTGGAACCATTCCTTCCTCCTTATCACCAGAGTCCTT
ATCAAAAACTCACGAAGAATTTGATTTAATTGATTCCACTTCCGCTCCTC
TAACCGTCAAACAACTTTCCCTCTCTGAGGAATCCTTGAACTCTGAGCCC
AAAGCAAAATCTTTATCCCCAGCAAAAGAACAAGAGGCATTTAATCCCTC
TGAGACTCCATATCGAGGTGTACTTCAAGCTCCAGTGACGGTATTATTGA
AGGATGAGTTTCAAGTGCACGAGGCAAGAGAAGCAAACTCGGAGGAAATC
GTTGGATCACTTCGGGGATTGCGTAAAGAAATTGATAAATTACTCATTGA
TGAGGAGGATAGAAAGTCTACTCCGGAGTCGAGCTCTTCTAAATGCACAC
TTGCGAAAATGGATTCTTCAGGAAACGATTCCACTTGTCCATATGATTTA
ATTAAAGTTCTTAGTTTTGAAGAGTCAGGCGAGGAGTTTCCATCGGATAA
ATTAGAATTAAAGCCTTGTTCCGAAGAAGATTCTGAGCCGAGAGAAACTC
CTGCTTTAGATAATGGTAATGTTATTGATCAAGAAGACAAAGACAAACCC
AATCATGGGAAACCCGAATCCTCCTCCTATTCCATGATTCCCCTTGAAGA
AGAAACACAAAAGGTTTTGCACAAACCAACGAAAACATCATATGATTATG
TACCTGCTTACTGCCCACGAACTCGAAATTTACTCAACGAGTCGAGTGTT
TATTCACTCAAATACAATCAAAGTCCCTATTTGACAACAACACAAAAGGT
ATCGGACTCTTTGGAACAAATGAAGGCGATGGGATTTTCTGACGACGATG
GTTGGTTGACTCAACTACTCACAATGGAGCGGGGAGATATTGATAAAGTA
TTAGACATTTTAACTCCTGTCAATAAGTGATTAATCATTATGTACAAACA
TAAAAAAAGAGTGATTAGCGATGAGTCATTCACAACTATTAACTTATTAA
TTTATAAAACTATTTAATTTGAAAAATATAATGTATTTTGAATACAGCTG
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