EMLSAT00000000574, EMLSAT00000000574-696421 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000574
Unique NameEMLSAT00000000574-696421
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
T F177 female
  1. PreAdult2
  2. Adult
 No visible phenotype
no visible phenotype 		30.10.2014 - 13:41
09.12.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1096supercontigLSalAtl2s1096:99490..100302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000574 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000574EMLSAG00000000574-683340Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002524EMLSAE00000002524-711452Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772118auto772118Lepeophtheirus salmonispolypeptide
EMLSAP00000000574EMLSAP00000000574Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000574

>EMLSAP00000000574 ID=EMLSAP00000000574|Name=EMLSAP00000000574|organism=Lepeophtheirus salmonis|type=polypeptide|length=270bp
MFGLWLLTAILLPSIIAYEGERLEIDKIVGGFQSKPGQFPWIVGLWEKNG
ISPFCGGSLLNFRWILTAAHCVYPENSETFHLPIAVLGDHNTRDVEDPHK
VRTPTCAVEMHPGYSTSKQDNDIALLRLCSDLQQFTKRYFAIDVARPEQE
LPDGTPLVVGGWGVLRFGAVSPTDILRAVVVKTVNHDTCNNAYGFITKAH
ICAGTGNKDACQGDSGGPLWLYEDKKPILVGVVSTGRGCGEAQFPGVYTR
VSKYFFWIVEIMGDVFHPGH
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mRNA from alignment at LSalAtl2s1096:99490..100302-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000574-696421 ID=EMLSAT00000000574-696421|Name=EMLSAT00000000574|organism=Lepeophtheirus salmonis|type=mRNA|length=813bp|location=Sequence derived from alignment at LSalAtl2s1096:99490..100302- (Lepeophtheirus salmonis)
ATGTTCGGACTTTGGCTTTTAACTGCAATTCTGTTACCGTCTATCATTGC
ATATGAAGGAGAGAGACTTGAAATTGATAAAATTGTGGGAGGATTCCAAT
CCAAACCCGGTCAGTTTCCATGGATTGTAGGACTGTGGGAAAAGAATGGG
ATATCTCCTTTTTGTGGAGGGAGTTTACTCAATTTTCGTTGGATCCTCAC
TGCTGCTCATTGCGTATATCCTGAAAATTCTGAGACGTTTCATCTTCCCA
TAGCTGTATTAGGAGATCACAATACGAGAGATGTGGAGGATCCTCATAAA
GTCAGAACCCCAACATGTGCTGTTGAAATGCATCCTGGCTATTCAACTTC
CAAGCAGGATAATGACATAGCTCTTTTACGACTCTGCAGTGATCTTCAAC
AGTTTACGAAAAGATATTTTGCCATTGATGTTGCAAGACCGGAACAAGAA
CTCCCGGATGGGACACCTCTTGTAGTTGGAGGTTGGGGTGTACTCAGATT
TGGTGCAGTATCTCCCACAGATATCCTTCGAGCTGTTGTTGTAAAAACTG
TCAATCATGATACATGTAACAATGCTTATGGATTTATTACGAAAGCTCAT
ATATGTGCTGGGACGGGTAACAAAGATGCATGTCAGGGGGATTCGGGTGG
ACCTCTCTGGCTTTATGAAGATAAAAAACCAATACTTGTAGGTGTTGTTA
GCACTGGTAGAGGTTGTGGTGAAGCTCAATTCCCGGGTGTATATACCCGT
GTATCTAAATACTTCTTTTGGATCGTTGAAATAATGGGGGATGTGTTTCA
TCCTGGCCATTAA
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