EMLSAT00000000628, EMLSAT00000000628-696475 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000628
Unique NameEMLSAT00000000628-696475
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s109supercontigLSalAtl2s109:771638..773491 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000628 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000628EMLSAG00000000628-683394Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002737EMLSAE00000002737-711665Lepeophtheirus salmonisexon
EMLSAE00000002738EMLSAE00000002738-711666Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779650auto779650Lepeophtheirus salmonispolypeptide
EMLSAP00000000628EMLSAP00000000628Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000628

>EMLSAP00000000628 ID=EMLSAP00000000628|Name=EMLSAP00000000628|organism=Lepeophtheirus salmonis|type=polypeptide|length=300bp
MPKNDDGSVGGGALKPIRGGVPFGPQPFSGQFTPPPSFSSQGSFNNQFPP
PNPNFQNGFPPSVAQQQFPQQFPPSGGGFNSQFAPHPNQFAPQGQFGRPP
QGAGQPSLLNLFSNFIATGLDSMNAFPYVRAGLIGQASDPLERGGNSCAR
MYRQCPTEPDRLLNYFNNHNGGIINHVQPSVDNEIGPIVSAIISDLMQEN
DSNGSTGSGSGGLLSTAGSFLSSYLSGSSNTGGSSSSSNNGGLLSSASGL
LSSFGGNGGSGSGGNSGVLASLLQSETGILNGAVDAITNYIHGPGPNGKK
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mRNA from alignment at LSalAtl2s109:771638..773491+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000628-696475 ID=EMLSAT00000000628-696475|Name=EMLSAT00000000628|organism=Lepeophtheirus salmonis|type=mRNA|length=1854bp|location=Sequence derived from alignment at LSalAtl2s109:771638..773491+ (Lepeophtheirus salmonis)
ATGCCAAAAAATGATGATGGTAGCGTAGGAGGTGGAGCTCTGAAACCCAT TAGAGGTGGCGTACCATTTGGCCCTCAACCATTCAGTGGTCAATTTACAC CTCCACCTTCTTTTTCTTCTCAAGGCAGCTTCAACAACCAATTCCCTCCA CCAAATCCCAATTTTCAGAATGGATTTCCTCCTTCTGTTGCTCAGCAGCA ATTTCCTCAACAGTTTCCACCTAGTGGAGGAGGATTTAATAGTCAATTCG CACCACATCCAAATCAGTTTGCTCCTCAGGGTCAGTTTGGGAGGCCTCCT CAAGGTGCTGGACAACCCTCTCTGTTGAACCTATTTTCAAATTTTATTGG TAAGAAAAGACGGAGAAAGAGAGACACCAATTTGCAAGGAAACATAATTA GGTAATTAATTATAATATTAGAAAATTAATTGTAATCTCTAATAAGGTGA TCGATTATATTCTGATTTAAAAAAGGAGGACATATTGACGCTTATGATTT TAAGGGGAAGTGGATGAATATTTTGAAATTAATAAATTTAAGAATCAAGT ATTAATAGATGTTTCATAAATTTATAAATAGGTCCCGGACAGTCTGGTGA AGATGTAATAAGATAACATGGGGGGGGGGGGGGTGGAGAGGATTGGTCCT CCAACACGTAGTCCGATTAGTATTAGGTTAATAAAAGTCCCGCTACCATT TTGATTGCCTATAAGTTATACCCAAACTTACTTATCTTTTCTTTGAACAA AGTTATAGGCTATAACTTTGTTCAAAGAAAAGATAAGTAAGTTTGGGTTT CATAAGAAGTTTATTTGATCTTTACATTTTTTTTTGTTATGATTGAAAAA TCATATCGAAAATGGACAAAAAATCTTCAATTTCACCAGAGCCATATTTT TAGCGTTACGAGACGTCCGTTTTCTTCCAGAAGAAGGTATGTTCGCTGTC GCACCGTACTACCGAAAATACGCATGTGAACGATAAATTGTGGTTTTGTG AGGCCCTGGACGGGGAGGATATCAAAATGCAGTGGGACTTTTGCACCCCC CGTGACCTCTATTTTTGTTCGAGTTTTTACATTTTGTCCCACAAAAATCT ATCATTTTATTTATTTTAAAAAAAAAGCCCCAGACGTCCTGTATAATATG TAAAAAGAGGACATTTCCGGGTACAAGAGGATGATTCGTCACCCTATTTC TCTGTAAAGTAAATAAATGCATGGAATTTAGTGAATAAATAATACTGTGG CTCTACAACACTAACATAAACAAAATTCTAATTTTCCAGATTATTAAAAG CCACTGGCCTTGATAGCATGAATGCATTCCCATATGTAAGAGCTGGTTTA ATAGGCCAGGCATCTGACCCATTAGAACGTGGAGGTAACAGTTGTGCTCG AATGTATCGACAATGCCCTACAGAACCAGATCGTCTCTTAAATTACTTTA ATAACCATAATGGAGGAATCATAAATCACGTACAGCCAAGTGTAGATAAT GAAATAGGTCCCATTGTGAGTGCTATTATTTCCGATCTAATGCAAGAAAA CGATTCAAACGGGAGTACAGGGAGCGGCAGTGGGGGACTATTATCCACTG CAGGTTCCTTTCTATCCTCATACTTGAGCGGCTCAAGCAATACTGGAGGG AGTAGCTCTTCATCGAATAATGGTGGCTTGCTCTCAAGTGCGAGTGGACT CTTGTCCTCCTTTGGTGGAAATGGTGGRTCTGGKAGTGGTGGTAACTCAG GAGTACTTGCCTCATTACTTCAATCTGAAACTGGTATCTTAAATGGTGCT GTCGATGCCATTACAAATTATATTCATGGACCTGGACCAAACGGGAAAAA GTGA
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