EMLSAT00000000638, EMLSAT00000000638-696485 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000638
Unique NameEMLSAT00000000638-696485
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s10supercontigLSalAtl2s10:1132105..1133921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000638 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000638EMLSAG00000000638-683404Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000002790EMLSAE00000002790-711718Lepeophtheirus salmonisexon
EMLSAE00000002791EMLSAE00000002791-711719Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780458auto780458Lepeophtheirus salmonispolypeptide
EMLSAP00000000638EMLSAP00000000638Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000638

>EMLSAP00000000638 ID=EMLSAP00000000638|Name=EMLSAP00000000638|organism=Lepeophtheirus salmonis|type=polypeptide|length=96bp
MINIKSVNRVISHSSPTSDRDHNREFKSLTLTPYYPDQRPKVCRAHLFYG
HAARSLSRPNNAPIDIPPDVHHRIBTGXXPSCTFKFRRLSPEKTRI
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mRNA from alignment at LSalAtl2s10:1132105..1133921-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000638-696485 ID=EMLSAT00000000638-696485|Name=EMLSAT00000000638|organism=Lepeophtheirus salmonis|type=mRNA|length=1817bp|location=Sequence derived from alignment at LSalAtl2s10:1132105..1133921- (Lepeophtheirus salmonis)
ATGATTAATATTAAATCAGTTAACCGGGTGATTTCACACTCATCACCTAC
TTCAGATAGAGATCATAATCGAGAATTCAAATCTTTGACTCTGACTCCAT
ATTATCCAGATCAACGTCCTAAAGTATGTAGAGCACATCTCTTTTATGGA
CATGCTGCACGCTCTTGTAAGAAATGGTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTTTATGGACATGCTGCACGCTCTTGTAAGAAATG
GTGCATATTTCCAAAATCAAGATCGAATTTAAATATAGAGCCTTCATCAC
GCCCTTCTTCTCCTATTCGTTCGGAAAACAGGAAAGGCAAGTGAGTTTAG
CGGCGAACTCCTTGCCCTTTATCAAAGTCGCAGCTCAAATCAATAAYTTG
GTAAAGGTGGAAATTTTAATCGANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCGCGGCTAATGGAAAAATAATTCAAGTATTTGGAGAGTTAACTTGTGTA
ATTGGAATTAAAACATTACGCAGGAATTATCCATGGACTTTTGTTGTAGC
TGATGTAACTAATCCTATAATAGGAATTGATTTTCTTCACCATTACGAAT
TTGTGATTGACTGCAAAAATGGAACTTTGTCCGACCCTAAAACTGGTAAC
TTAACTGCAGGTATTCTCTTATCAAAGAATGGCATATTTGCTATCAATCA
AACGTTTGAANNNNNTTCCTCCCGCTTGTCCGTACACCTCGTCTGTTCAG
TTCTCTCCTGAGTGCCAATAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATAGG
CAAGTAGTCAAAAACTAGTTAACTAGTCCTTGAGCTTTTAAAAAAAATAG
GACTTGCTAAGAATAATTTTCAACCTCCCTTCCATGTGATAAATGATAAT
CACAAATCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCATACTTGCTATCAATCAAACGTTTGAAACATCTGAGT
CTTGTATTAAAAATATTTTTATGAAATATCCTTATTTAACAGTATCTCGT
CCTAATAACGCCCCGATCGATATTCCTCCGGACGTACATCATCGGATARA
TACTGGAAGKTYTCCYTCMTGTACATTCAAATTTCGTCGTCTTTCTCCTG
AAAAGACAAGGATATGA
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