EMLSAT00000000920, EMLSAT00000000920-696767 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000920
Unique Name	EMLSAT00000000920-696767
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s115	supercontig	LSalAtl2s115:757843..760876 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000920 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000920	EMLSAG00000000920-683686	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004041	EMLSAE00000004041-712969	Lepeophtheirus salmonis	exon
EMLSAE00000004042	EMLSAE00000004042-712970	Lepeophtheirus salmonis	exon
EMLSAE00000004043	EMLSAE00000004043-712971	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779601	auto779601	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000920	EMLSAP00000000920	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s115:757843..760876-

protein sequence of EMLSAP00000000920

>EMLSAP00000000920 ID=EMLSAP00000000920|Name=EMLSAP00000000920|organism=Lepeophtheirus salmonis|type=polypeptide|length=102bp
MFGKLKSCPQKVEQYFKIQRCHQIPGVGSFPFFIKTPVDNAHVEKSVENV
HAQIVLVPDAKIKKLSRETTRLVEYVSSNTIPMFLKRVQTSLQIFNGCFP
KS

mRNA from alignment at LSalAtl2s115:757843..760876-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000920-696767 ID=EMLSAT00000000920-696767|Name=EMLSAT00000000920|organism=Lepeophtheirus salmonis|type=mRNA|length=3034bp|location=Sequence derived from alignment at LSalAtl2s115:757843..760876- (Lepeophtheirus salmonis)
ATGTTTGGGAAGTTGAAGTCTTGCCCTCAGAAGGTGGAGCAATATTTTAA
AATTCAACGATGCCACCAAATACCAGGTGTTGGAAGTTTTCCATTTTTCA
TTAAAGTAAATGTCAATCTTTGATATAATAAATAAAGTTATACAAATTAT
TTAATCATATATTATTTTTCATTTGTTTTTTTGTTGCTTCAGGAAAATTC
TTACGATGATCTTAACCGCTTTAGAAAATATATAAATTGATGTTTAGTTT
TGATAAGGCTCTCGTTAGAATTTTGAATTATATTATATATTTTCTTAATT
AACCAGAGAATTTTCTTTTAATCAGCTCGTAAATGATATCCTAGATCAGT
GGCTCTCAAACTATTTAAATTAAATGTCAATGTTATATAAAATTTGGGAT
GATCGTTTCTTTATAAAAAAAAACATTTTATTTGAATTTTTTTAGACAAA
CTATAAAAGTATTCAGAATGGCTACCCAAAACTTTTGTTATTATTCCATG
TCTCTAAGTGGAAAAACGTCGGAGCAACATCAAAAAAGGCAACGTGTGTG
CGATCTCCTTCGTGCCAGTACCCATAGGGTCTGGAATAAACAAAAATTCT
TCAGCAACAATATGGTTGACTTCTGGCCTGGATCCATGTGACACTCCTTT
ATCCCAGACTTGGCAGTTTGGGACGTCTTGAAGAATAATGTCTGCCTCMC
CTCTCATCCAAATTTAAATTGATTCGGAGCTGCCAACATGACAGTGTCNC
GCTGTAGACACAGCTTTCATCGTCAAGAGGTGCTAATCTGTTCGCCAGCG
CGTCAAGGCTGTTATTGATTGATATAATTTTGAATATTTTTTTGCTAAAT
ATCGTATTTAAATCTATGAAAAATTAAGTTTGAGTTGTTTTTCTTTATTT
CATAAAAATTATTATTATTTAATACGTTCTGCTACTACAAGTTTTGGGTA
GCAACTCCGTATTACTAATTTTGACAAGAAAATTTGAGTTAGACAGGGTT
TTACTCCCCCTCCTCCCAGCTCAAACCTCCACGTATCATTAAAGGTAGTT
CGGACAAAGTTTGAGAACAACTGTTTAAGACAATATATTTCAAGGGTTTA
TGTTTCTATTTTTTTGTTAATGAATTAATATTTTTTTGGCAAACGACGAA
AAACTTGCATTCACACATCCAACGTTTGATTTTGTGATTTCAGGAATTTC
TTAACCGTTAGTAAAATCTATGCAGGTGGCCTACCACATCGAGCATAAGT
GTAGACGTATATACGTTTATCATTTGGAAACAGACAAATAAAAGAATCTA
TTTCTAAAAACTTTGTATAATATTATTTTCAAACCATAACAACTTTCCCC
TTTCAAAATATAGAAGTATTGTAATTTTAAATGTTTTTTTGTTTTGTTTT
GGGGAGTGAAAATCCAATGATTAAATTTTGAAAAATTTGCCATTTTCTTT
TTCCCAACCCAAGAGAATTTAAATTCACATAACAAAAACAAAGTATTTAT
GAGTTACTTCTTTTCAAAGTTTTGTAGTTATTGGTAAGATTCTTGGTACT
TTTTTAAATGTTATAGCAATATTAAGTATAACAATCAACTAGGGATATAT
ATTTTTGACTTGTAAAGTCTATAAGTCTTGTCATTCAGTTTTCTTAAATG
TGTCTTACTTGTATACTTATTCAATACAGTTCAATTTTGATAGCATAGTC
CCCCCTTGTGCACAATTGATAAGATATATCCTTCCAAAAATCCCCTCTTA
ACCCTTATCTATTTGATTATTTATGATGATTGTAAATCTTTAAGAAATAT
CAGGCCTGACGTTTGAAGTTCAGTATCAGGACATCAGATATAATCATTTT
GTATATTTGACGCAGAAATACAAAAGCTTCAAAAAAATCAAAAAATTCAC
ACAGCTAATGAAACCATTAAATAATGCAATATAAGTTGTACAACATTCAT
ATTTTTTAGACCACCCTAATATATAGCTATACATTTTTGAAGGAAAACTA
CTTAAGAGAGTGCTGCTTGATTTTGTTTATCAATACAAAAATATTTTTCA
ACAGTATACTATATTCTACTAAAACACATCTGATCAAAATGCCTAGTAAG
TATATATTATAGGGATTGATAATTTAGAGGTTCTTATTTTATATATTTAT
TTTTATAGACCCCTGTGGACAATGCTCATGTGGAAAAGAGTGTGGAAAAT
GTTCATGCACAAATTGTACTTGTTCCGGATGCAAAAAGTAACGCACTCCT
TACAATGCACATGAATTATATAATTTCGATATCATGTAATTACTTATGTA
ATAAAAAACATTTATAATAAAGTATTATTATTTTTAATGAATAATTATTT
ATTCTGATGTGTAAAACCGAAAACGATTTAAAAGAATTTCTTCTACCATT
TTTTATGTCAATCATTCCTATACTGAAAAACTTTTGATTTTGATCTACCT
TCGGAGTTACGGAATAAAAGAGTGCACAATAATAAAAAGGTATATAGATT
TAAAACAAAGAGTAACCCTGAAGATTTATTATAGAGTTATAATTATAATT
CTTTGTTGGACTCAAAATATGATTGAGGAACGACATCGGAGTAATTGTTG
CCTATGTCCTTGTTCATCTCATTCTCTCCGTCGTCACCGCTGATTGTAGA
AGATCTAATGAAAAGGCATAAGAACGTAGCTGCTCTCCTCTGACACATTT
TTCAAACGATCAGGGTTACCATCTTATTTTTCGAAATCTTTGAATCCAAT
TTGAGAAACGACTTCGGCAACTTAATCAAAAACAATTTTTACAGTTTCAG
CATTCAATTTGGATACGGGATGCATTGCAATCATGTCGTTATAAGTAGAA
TGAAGGCTCTTAATCAGAACGAAAAATATTGTCTTGGATATCTCTTCATC
TTATTTTAGTCAAAAAACTCTCCAGAGAAACGACTCGTCTTGTGGAGTAC
GTTTCATCAAACACAATACCAATGTTTTTGAAAAGAGTTCAAACGAGTCT
TCAGATATTTAACGGTTGTTTCCCAAAGTCTTGA

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