EMLSAT00000001004, EMLSAT00000001004-696851 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001004
Unique NameEMLSAT00000001004-696851
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:453971..456038 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001004 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001004EMLSAG00000001004-683770Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004453EMLSAE00000004453-713381Lepeophtheirus salmonisexon
EMLSAE00000004454EMLSAE00000004454-713382Lepeophtheirus salmonisexon
EMLSAE00000004455EMLSAE00000004455-713383Lepeophtheirus salmonisexon
EMLSAE00000004456EMLSAE00000004456-713384Lepeophtheirus salmonisexon
EMLSAE00000004457EMLSAE00000004457-713385Lepeophtheirus salmonisexon
EMLSAE00000004458EMLSAE00000004458-713386Lepeophtheirus salmonisexon
EMLSAE00000004459EMLSAE00000004459-713387Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777826auto777826Lepeophtheirus salmonispolypeptide
EMLSAP00000001004EMLSAP00000001004Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001004

>EMLSAP00000001004 ID=EMLSAP00000001004|Name=EMLSAP00000001004|organism=Lepeophtheirus salmonis|type=polypeptide|length=536bp
MAEAESQFTCAYCQIQANQRCTGCHVTFYCSREHQKLHWKKHKNRCCSYK
ICNSEXLGRYLXATRDLKPGELILMEAPTIIAPMAVTPPVCLSCYAPVDG
RYMCPLCGWPMCNEICRNSPAHIPECRITAERGSPIKIAVTINKPFPLYE
VVALLRCLYMKEKSSEKYKALIRLEPHTKERIKNGKYSRDKMTMLRVIRE
FFSVPSTRFPDEDILALCGILFVNSHEVPVTMSPSQALYQNASLLEHSCV
NNASKHFDMNCNILIRVAIPIKKGEHISIMYSDPIWGTVNRQQHLLETKF
FTCRCIRCQDPTELNTHFSSIRCPGCPAGFLVSLDPFNYESDWKCETCNR
VETPRFVNAVIRSIGEELISLEKGSPEACLSFVKKHSQNLHPHHFYLMDV
KLALCQMIGQSSYGTGSEIFELHEKDLLQKQKLCTEILEVANKISPGVSR
LRGVVMYELQAXXAAYARKKFSNGEISSDHMKNILQEVKKYLQECIQIFS
YEPTCLQEGKLAAIARLDLVELETFMDSVESKKAIQ
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mRNA from alignment at LSalAtl2s116:453971..456038-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001004-696851 ID=EMLSAT00000001004-696851|Name=EMLSAT00000001004|organism=Lepeophtheirus salmonis|type=mRNA|length=2068bp|location=Sequence derived from alignment at LSalAtl2s116:453971..456038- (Lepeophtheirus salmonis)
ATGGCTGAAGCCGAATCCCAGTTTACTTGTGCATATTGTCAGATTCAAGC TAATCAAAGATGTACTGGATGTCACGTCACTTTCTACTGCTCTCGAGAGC ATCAGAAGCTTCATTGGAAAAAGCATAAGAATCGATGTTGTTCCTATAAG GTATGAGCTCTGTCACTTGATCCTGGGACTTTGAACCATTTATCTGGGTT ATTATTTATTTTTTTTAAATTTTTTGAATTTTTGCCAAGTAACATGTTAA AGTTGAAATCATTAAAGGTCGTTTCTTTGATTTTATCAAGAACTAGCCTA AAAATCCCTGTTTCTAGATATGCAACTCAGAGMCTCTGGGTCGATACTTG KTAGCCACTCGGGATTTGAAGCCTGGAGAGCTTATTCTCATGGAGGCACC CACTATCATAGCTCCCATGGCTGTTACTCCACCAGTTTGTCTATCCTGTT ATGCTCCTGTGGATGGTAGATATATGTAAGCTTCTGTTAAAATAATATAT CGTACGATTCTTAATGTCCCTTTTTGAATTTTAGGTGTCCTCTATGCGGC TGGCCCATGTGCAATGAAATATGCCGAAACTCTCCTGCTCATATTCCCGA ATGTAGGATTACTGCAGAGAGAGGCTCACCCATCAAAATTGCTGTCACAA TTAATAAACCCTTTCCTCTCTATGAAGTTGTGGCTCTTCTTCGGTGTCTT TATATGAAGGAAAAATCCTCTGAGAAATACAAGGCTCTCATTCGTCTTGA ACCACATACAAAGGAACGAATAAAAAATGGAAAGTAAGGATCTTTTGTTA TTCGTACATAGAATGGATCCAAATATCTATATCCCTAGGTATAGTCGTGA TAAAATGACAATGCTACGTGTGATTCGTGAATTCTTTTCTGTACCTTCAA CTCGCTTCCCGGATGAGGATATTCTTGCTCTCTGTGGAATTCTCTTTGTC AACTCCCATGAAGTCCCAGTGACAATGAGTCCATCCCAAGCCCTCTACCA AAACGCATCTCTTCTCGAACATAGCTGTGTGAACAATGCCTCCAAACATT TTGATATGAACTGTAATATTCTCATTCGAGTTGCCATACCCATTAAGAAA GGGGAACACATCTCCATCATGTAAGGCTCTCAAACTCTCTTTTTATACAT ATAATTGTAATAACTATGACTAAGGTACTCTGACCCAATTTGGGGAACCG TGAATCGACAGCAGCATCTATTGGAAACAAAATTCTTTACGTGTCGTTGT ATTCGTTGTCAAGATCCAACTGAGTTGAACACGCATTTTTCTTCCATTCG TTGCCCTGGATGTCCAGCCGGATTCCTTGTAAGCCTGGATCCTTTCAATT ATGAAAGTGACTGGAAATGTGAGACTTGCAACAGGGTGGAGACACCACGT TTTGTCAATGCCGTGATTCGAAGCATAGGAGAGGAACTCATATCCTTGGA AAAGGGATCTCCGGAGGCCTGTCTCTCCTTTGTCAAAAAACATTCGCAGA ATTTACATCCTCATCACTTTTATCTCATGGATGTCAAATTGGCTCTATGT CAAATGATTGGTCAGAGTTCCTATGGAACTGGAAGTGAAATCTTTGAGCT ACACGAAAAGGACCTCTTACAAAAGCAAAAACTTTGCACAGAAATATTGG AAGTGGCCAACAAAATTTCTCCAGGTAGATATTTGTATGTGTAAATCCAA ATATTCCTTAATATCGGATTACTTTGAATTAATAGGTGTTTCTCGACTGC GTGGAGTTGTAATGTATGAATTACAGGCTAMAWTAGCTGCMTATGCGCGC AAAAAGTTTTCAAATGGAGAAATTTCGTCAGACCATATGAAAAATATTCT TCAGGTATGATCCATTAGACTACAATTTATTATATTTAATTAAAAAACAA AAACTTTTATTCTAGGAAGTCAAAAAATATCTTCAGGAATGCATACAAAT TTTTAGCTACGAGCCTACTTGCCTTCAAGAAGGCAAGCTTGCCGCCATTG CCCGATTGGACTTGGTTGAACTTGAGACATTCATGGATAGTGTGGAATCT AAAAAAGCAATTCAATAG
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