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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1223 | supercontig | LSalAtl2s1223:264422..270594 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001335 >EMLSAP00000001335 ID=EMLSAP00000001335|Name=EMLSAP00000001335|organism=Lepeophtheirus salmonis|type=polypeptide|length=222bp
SNISEKLISLSIFIKKGSLYRLLEKTRQHLSNIIMTDKFMSVIFMLLLGI
VGILSADPLHLEHEGDSTSSADHIVRYLRSGHELLGSIPTKRPSQSRDLY
RLLRTLRSSSDQIVGTSKYKNSESTANPPQKGFFLRTLRGNKGFFLRTLR
EDDSNKGFFLRTLRSDPQKGFFLRTLKRSNNNNEIASLEDLDGFEGDEDV
YVGEDEKPWPHNVVFQRELPIF back to topmRNA from alignment at LSalAtl2s1223:264422..270594- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001335-697182 ID=EMLSAT00000001335-697182|Name=EMLSAT00000001335|organism=Lepeophtheirus salmonis|type=mRNA|length=6173bp|location=Sequence derived from alignment at LSalAtl2s1223:264422..270594- (Lepeophtheirus salmonis)
TCCAACATATCTGAAAAGCTCATCAGTTTGAGTATATTTATCAAGAAAGG
ATCTCTATATCGCCTCCTGGAGAAGACAAGACAGCATCTTTCTAATATAA
TTATGACTGACAAATTCATGTCCGTTATCTTTATGCTCTTACTGGGAATT
GTAGGGATTCTTTCCGCGGATCCTCTTCATTTAGAACACGAAGGAGATTC
CACTTCCTCTGCAGGTAATCCTAACCTTTCTTTTCTGGGGGCATCCATGA
AAAAGCATCACTCGAAGTCAAATTAAATAAAGGGGTTTCCTTAAGAGCAC
CTCAGCTATTTTTTTAAATAAAACACAAACAATTAAAGAGATCACCAAAT
TTATTTTTTCACTACAAATCACTCTAGCTTGATTATCAAGAGCATGTTTA
TAGAAGTCCAATCGCTGAACCCAATTTTCTACTACTTTTTTCAATAAATT
GACCGATATTGCATCAATTTTGAGCTCAATATTTTTTCTGAGCTCTGATA
ACGTCGTCGGGTTATTGGTGTAGACCAATGACTAAGAAAATAATCTAAAG
GGGTTAAATCCCACGATCGAGGTGGCTAATCAACTGGTCCATTTATCGAA
ATAACGCGCTTACCAAAATTGTTTTGCAATAAATCGATTGTAATTTTTGC
TGTATGACAAGTGGCGCCGTCTTGATGGAACCATATTTTTGCCAAGTCCA
TACCTTTCAATTGGGATAAAATAAAAATCATTTATCATGGTGCAATAGCA
ATTTATATTTCTACTACAATTTTTGCAATTTATACCCCATTTGGGGTAAT
TTAATCCTGTTCCGATACCACTGCTCTGAGACTATACACTCCTTTGAGGA
TTAGTACACACCCTCTTCCCTAGACAGAGTAGTCCAATGGGTTCGTGTCT
GAAGAGGAGGGCACCCCCATATTGAGGTCCCAAAAGTCTGTAAAGTTGTC
TCTCAAGAAGGCCTGGGTCTTAGCGGTGCAATAGCATGTAGTCTTTAGTG
AAAACAATGTTCTCTCCGAACTTTTATCTAGCCCAACGTAGCACTTTCTT
AACCAGTAGTTTGATGTCAGTATCTACATTGAGCCGCTCCTTCCTCTCCA
CAAAAATGGGAGGGCAGATTTCGCTTGTARTAGCCACTGGGCTTTTTGTT
CTGAAAACAATGTTCCACAATAATCATTTATTGTCATAATTCCTTCCTCA
TAAATTTGAATAGCGGGGTGCCCCTGCTTATAACGAAGGAATCATTGATG
TTTCTCAGGAACTGCTGAACAAAATGTGTTTGTCGGAAAATTGCTTCATT
TTTGTACAAATCTGGGTTCTGGCCTTAGAGAAAGCCTCTCATTTGTGAAA
CTTTTGCCAAGATGGTTTTCCTTTAACACTAAAAGGACCATCGGAACATT
ATTTCATTTCAAACAAATGTATAATTGAGCAGAAATACTTTGTTGAACAA
AAGTTTTACAACTTGTGTAGTAACGTACTATGCCAGATGTTATCACTTAA
CAGGGGCGTCCGTAAGGGGTGGGCAGGAGGGGTTGTAGTCCCCCTCAAAA
AAAAAAAGGAATCTGTACTTCTTACTGGGAAAATTAATATTCCATTTAAT
TTTTTCAAATCATTAATGGTATTAATCCTTTGACGGTGCATTAAATTGCA
ATTGAWGTAGCCACATTATGCCTCATACTCCGTAGACTGAAATATAAGCC
CCTCTTATATTATGGTAATAAAATTATAAAAAACTATCATTTGATGTAAA
CAAGCGTTTTTGTAGTTGTTGATAAGTTATTTCCTACTCACGGCGTTATC
TCGATAACACAAAATGTTTGTTGGCAGCTGTCGATTCCCTCTTCTCCCTT
GATACGTCATGGGMATTTCATAATTTATTCTTTTTCATAAATACACAAAG
TAATAAGTTATTCTATACTTATACACTGTTTACCAACAAGGACAGGAATA
CAATTTCTAGTTGATCCCTCGTCGTTCATATAAAATATATATCGGCCATT
TTATTATCTCTATGAAGAATGTTGGCTATTTCTTCATAGAAACTTATCCC
TCTAAGCAATATTATAATACAGTATCGAATAAAATACTATGTAGATTTTA
ATAATATGTAATTCATTTCAAAAATGGGGAAAAAAGAATATGACAGTCAT
AGTCTGCGAGTACATAAGAGATACATAGCTGTTGGTATCATTAACTTATT
TACTAACTACCAGATGATTTCGGGCCTTTTATATGTTTCCTTATGGAGGA
AAGGTATGCACGATACAATAAAGATTCCGACGTGTATTATGTCTTCTATT
AGTTATGTATAATCTTGAATAAGGGAGAGTTTCCCGTAATTATTTGATTG
ACACTAGACTAAGGATTTTTGAGCAATTTTTTCCGCCTAAATTATTGGTT
CACTAAAATTTTGGCAAAATGAGCAACCAAAATATCAAAATCGAGCGATT
TGTATTAAAAGAAAAATACAGTTTTATAATAATAATTTAGAGGAATAATT
ATGTTTATTTTATATTTATCAAAATTTCTTCATTAATTTTACTATCTTAT
ATTGACAAGTTAATATTTTATGTAGAAAGATTTTTTTCCGTTAATTTTTC
CCTATGATCAGTATTGGTAGTATCAAACATATTTAAAAAACGTCCACATT
AGTAGTTGAAGTAAATTTGAAGTTGGCGAGATCTTCAGGAGTCTTGTAAA
ATGGAGGAATCTCATTATCACCACCAATGATATTACGTCCAACCTTTGCA
TAAATGGATGATCGATTTGACGCAAATGTATTTCTCATTTGTGTCAAAAT
TTAATGGGGATTATTCAACAGTTAATTTTGCACCAAATTTATTCTTCCTT
TAATCGGATGTTGTCTGAATCTGAATCCCTCACACATCCAATCATGTAAT
TCATAACCCTGATAGTATCATATAGACATTTTACCTCCAAAAAGAGAGCC
TTATAAAGGAAGGTTTTGGCTGGMATATTTTTCCTCGAAAAATATCATTA
AATAATCATCAAAAGCTATTGTGAAATCTAACACAAACTTTGAATATTTA
TTTCATATGAATTTAGAAAAATGAAGCATCTTCACACACACACAAAAAGG
AGTTAAATGAATCATCTTGTCTATACATTATTTTAATTAACTTATGATGA
ATATAGTTTTTTTATGGCGTTCGCAGGGGGGGGGGGCTKCAGCCTCTCCK
GCCACCCCAAGAATCATGGCCTTTCTTAATTTTAGTAGGAATCTCTAGTG
TTGTGTCATTCCTTATTTATTCGGTACAGTCCAGTCTTAGAACATCTCCT
ATCAGTCCTTCGGACTATCAGTAATAGAACTGATTAAAAAAGTAGAAATA
AGGTTGGAACTTGCATCAAGAGCCCCTCTGCATAAGTCATACAAAGTAGG
ACTTCTGAATTCTTTCCATCAATTATATGCTTTTAATCAATTATAATTAT
CCTCAGTAATGATTTATTTCTGAGACAATTTGAGTGTTTTTGTCTCTCAT
AATTTAGATTAGTATTTGATTGAAAAAGGGGATTATGATTCTTCTTATTT
GATTGAGTCCATATAGTCATTGATAATCATAAATCATGATTAAGGCCTGT
ATAAATTTATATATTTTGTACTCGTAATTGAAAAGGAAATACAATTGGAA
AGGTTATGTTAGATTAGTGAGTAATTTTGTTAAGATAAATTGTATTTTTG
GGAAAGTATCAATACAAAAATGATTATTCCCAGTAGTTTGTTGATGGTCA
CAATGTTGTAACTACGGGGGTACTTAAGACTCCCAAAAAAGGATGTTTGT
CTCCCTCCGCACAACTGAAATATAAGTTTAAAAGTAAAATTATATCATAT
TAAAATGTAAAAAAAATAACCTCAATTTGTAGGCTTTAAAAATAAAATTA
TATCATATTAAAATGTAAAAAAAATAACACTTCAATTTGTAGGCTTTAAA
AGAAATTTCAAAAATAAATTAATTTAAATATCCTCTCAATCTAGTCAACC
CAAACAGAAAAGCTTTAGTCACAGCACTGGGCCTTTCTAGAATTTGAAAA
GTCCCTCCTAGGTTGGATACACCATGTCTAATTACAAGACTTTGTATAAA
GCAAGGTTAATAGAAATACAAGGTTCGACCATCATATAATCGGGCTTGCT
AGAATTTTCAATTTGATGTATCGTACCGACTGCTGGGCAAGACAGGCAGA
TTTTGACAAAGCACGCAACCACTTATAGTCCATGATGTCACTATTGTTAG
AATTTTTAATTTAATGTATCGTACTGACTCCTGGCAAGAAAAACAGATTT
GGACAAAACACGCAACCACTCATCTAATATGACATCAATATTAAAAGCCA
ATCAAAAGAATATTAAATTAATTAATTTTTATTTTATTTATTTAATTATC
CAATTAAAAGAATCAGTGGGTTAGGAAGTATTGGTTAGGAAGGGTAGTTT
TCAAAGGATTGTAACCAGACCTCGACAGACACGCTAGACGGGGCTAGTAA
AAAAAACAGTTGGCTAGTGTAGGATGGCCTGTATCTATCCAGTTTGACTG
CTATTGCCATACCTTAAATACCACATCAGGAGCGTCAGCAGGATTATATT
TTTTGGGAGGGGGGNATGAAGGTTGGTAAAGTCCCTGTACCTATAAACTA
TAGACAGTGGGTATAGTACCTAAATATCAGAGATTGGAGCAAGTACGTTG
GTATTTTTACTTAAATATCCCTAAGTCCTATAATTTAGTATCTACACTTA
AGTATCCTTCTTAAGTTATATAACTTAGTATTTATACTAAAGTATTCATG
AAACATGAGCAATAATACTTGGCTTAAAAAGTAGTAGTTATTCATACTGG
AAACTTGAATTTTTTTAAGTACTTTCAATAGAAAATGATGAAAAAGAGTT
CACCTCTTTCGTTTCAAAATATTTTAAAAACAATCAATATTTTCATCAAT
TGTTATTAAGGTGATTACACCTTTCTTCTCAATTTTGATCCATAAACTGT
CTTCCTTGCAAGGAATTCCTACGCTAACCTCCACTTATTTACTTCCTATA
AAAGTAGACTTATTCATAAAATGGGATGGAGACAAAACAATCATTATTAT
TCATAGTAAATAAATACACTGCAAGTACTTGTAAATTACTTGAATACCTC
AAAAAATAGGCCTATACTTGCCTTTGTACCTGCAATTTCAATGAAGTACT
TGTACTTGGGCCCATTCCTTCTTGATATTTCGGGTAATAGGATATCGATA
TTGAATGAAAATATCAGAATGGATGAAGTAATCTCGATATTGGGAGTGAA
GTGATGGACTGTCGATATAGTTAATAAATAATCTAGGTAGTAATTTGTTA
AATAGGCTACTACAGGAAGTTCCCTCCAGTGATTTGAGAATTAAAGATTA
AGGTAAGATTTAAAAGAACAGAAAACCTAGACAAGCTCTGGAGTTATTTA
GATACAATAAATCCCATCAGTATTGAATCTACATATGTATATGAAAATTC
TCTGAGCAATCTACTATGTTTTCTAAAGTCAGTATTCCAAGACAAAAAAT
AATAATCTCTTTATTGATTTATTTTAATACAAATGGCATCAATTTATAAC
TTTATTTTCCCTGTCACATTAAATGAATTATAATTTGAGTTTAATCTCCC
AATCAGAACGCATATTAATATCCTTACTAAATTTTTTGATCTATTAATAT
CCCAAATTATAACTTTCCTAGATCATATAGTTCGATATCTACGAAGCGGA
CACGAACTCCTCGGAAGCATTCCAACTAAACGCCCCAGCCAATCACGAGA
CTTATATCGTCTTCTCCGTACACTCCGATCCTCCAGTGATCAAATTGTAG
GAACATCCAAATACAAAAACTCAGAATCAACCGCAAATCCACCTCAAAAG
GGTTTCTTTCTCCGCACTCTCCGAGGAAATAAAGGATTCTTTCTCCGAAC
ACTGCGAGAAGACGACTCCAATAAAGGTTTCTTTCTACGAACCCTACGAA
GTGACCCACAAAAAGGATTCTTCCTTCGAACCCTGAAACGCTCTAATAAT
AATAATGAGATTGCCTCTTTGGAAGATTTAGATGGATTTGAGGGCGATGA
GGACGTCTATGTTGGAGAGGATGAGAAACCCTGGCCACATAACGTGGTTT
TCCAACGAGAGCTCCCAATTTTT back to top
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