EMLSAT00000001689, EMLSAT00000001689-697536 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001689
Unique NameEMLSAT00000001689-697536
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s128supercontigLSalAtl2s128:964109..966295 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001689 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001689EMLSAG00000001689-684455Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000007453EMLSAE00000007453-716381Lepeophtheirus salmonisexon
EMLSAE00000007454EMLSAE00000007454-716382Lepeophtheirus salmonisexon
EMLSAE00000007455EMLSAE00000007455-716383Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780177auto780177Lepeophtheirus salmonispolypeptide
EMLSAP00000001689EMLSAP00000001689Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001689

>EMLSAP00000001689 ID=EMLSAP00000001689|Name=EMLSAP00000001689|organism=Lepeophtheirus salmonis|type=polypeptide|length=404bp
MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHG
IGDWEGLVKRIMYENNLFLSLESAIFRERKLSPQIKFFNMTDLRTGIIQN
KKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPSEKALGCLK
SRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLK
LSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVPHNQPFSFLDD
KYFIHEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGDLLVYVLDN
GRIHFHDLNTSQEIYAFLVPELIGHHSVSLRISMDYTIIISVLGYEDFIF
FCHMRDLENNSYTFRVEKHAFLAFNRLKVVYRETNSLTSLMVIELMPDYS
VEDQ
back to top

mRNA from alignment at LSalAtl2s128:964109..966295+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001689-697536 ID=EMLSAT00000001689-697536|Name=EMLSAT00000001689|organism=Lepeophtheirus salmonis|type=mRNA|length=2187bp|location=Sequence derived from alignment at LSalAtl2s128:964109..966295+ (Lepeophtheirus salmonis)
TCTTAAGGCACGGAACCTCGTCAGTTATGACGTAAATATTTTACAGTTTG TTATTGTCAAGTCACACTCATTGTAATTCGATTTAAGCTTTATATAGAAA TGGATATAAATTATAACATATTCATGCAATGAAAATAAAGAAATCTCAAT GATATTTTTGATCTACGAAGTTATAGTACACAAACAGTGTATTCAATAAT CGAAGACGAATAAGTTACTATATGGCATTAATCATCATGGACATTATTGG AGAGCTCTATGCTAGAAATCAAAGTTATTTTGTGAAAATGATTCTAATTT ATGCGGGACACAATTCTGTTTGTAGTTGTCTTTTAACTTGTCGCTCTTGG TACAATATGATCCGACATGGAATTGGGGATTGGGAAGGCCTTGTAAAAAG AATTATGTACGAAAATAATCTGTTTTTATCCTTAGAATCCGCCATTTTTC GTGAACGTAAACTCTCACCTCAAATCAAATTTTTTAATATGACAGATCTC AGGACTGGAATAATTCAAAATAAAAAAAATCCTCGGAGTTGGACGCTATC TGCGGGGGGAGCTATTACATATTTTTTATTGCATTTGAACATTTTGTATA CGGGAATGAAAGACGGACGGATCAAAATGTGGTCCATGAAGGTAAATCAA TCATATTATAAATGAAGGTACTCATGATGTTTAGTTTATCTCTTGTCTTT CTTAAATGTTGTTTATCAAAATAAATTAGGTATTATATTATTTTATTATA AACTGAATAGATTATATAATTAATTGTAATTATTATTCAAATTATAACCA ATCTTTTTTTAAGCCTTCCGAAAAGGCACTAGGATGTCTTAAAAGCCGTA AGAACTTCCCTGTCTTGGCTTTGACTGCACGTAAAAACATCCTAATCAAC TCTAATTATGACATTTCCCTCTGTGTTTGGGACTTGAGAACTAAAGCACT TCTAAGGGTCTTGAATTCTCAAGCACTCTTATATAGCTTAAAACTTTCTT CCACTCATTTGTTAGCATTGTCATGGGCTCCTGAAAGCCAAATTAAATGT ATTTGCTTTGGTATTAATTCACACTATGACCTGGAAATAAAAGATTATTC CCCTGAAGTACCGCATAATCAACCCTTCAGTTTTTTGGATGACAAATATT TCATTCATGAGGACAATGTTATTTCCAGATATGAATTATCTGAGTTTAAC TATTTTGAACGGGACGTAGTCATACATGGACTTACTCATAGGGTCAGCAG TTTGGACGTTATTGGAGATCTTCTCGTTTATGTACTAGACAACGGAAGAA TTCATTTTCATGATTTAAATACTTCACAAGAAATATATGCCTTCCTTGTC CCAGAGTTGATTGGTCACCATTCCGTATCACTTCGAATATCCATGGACTA CACAATCATTATTTCCGTGTTAGGATATGAGGATTTCATATTTTTCTGTC ATATGAGGGATTTAGAAAATAATAGCTATACATTCCGAGTAGAAAAACAT GCTTTTCTCGCCTTTAATAGGCTCAAAGTCGTATATAGGGAGACCAATTC CTTGACATCATTAATGGTGATTGAGTTGATGCCGGACTATTCCGTAGAAG ATCAATAAATGATATTCATCCATTTAATATGTGTTATATCCTTAATTCCA TTAAAATATGCTTATTTTTTAATTATAAATATTAATGTATCATTGTATAT TCAGGGGCGTCCGAAGGATTTTTTTTTTTGGGTAGGCATTTTGCAAAGCT TGGCTTTTTTTTCAAAAATACTACTAACAAAAAAAAAAAATTTTTTGGAA GAAAATTTCAAAAATCTGTAGCTATTCAAAAAAATTCCAATTTATTAACA TAAACATAAATTTGTATTTTTTTAAAAATCCATAGCTATTATAAGACACT TAAATTTTTGGAATGTTTTTTAAGTTTTAATTTCAAGGAAAAAAATTGAA AAAATAAATTAAATTTTAAATATTAAATTTTCTAGTAAAAAGTAAAAATT CCATATTTTGGGGGTGGGGGACGCACACATATTAATATTGTATAGCTAAT CTTGTAAAATGTTTTATTTGAAAGAAGTTTTAACACTTTGTATCTTTATG TCAAATTACATTATGTTATGGGTTTGAAGAATACAAATTATAGGGATATA CATTTATTAATTAATTATATTATTCTCTAAAACTGGC
back to top
Add to Basket