EMLSAT00000001931, EMLSAT00000001931-697778 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001931
Unique Name	EMLSAT00000001931-697778
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1338	supercontig	LSalAtl2s1338:61614..66677 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001931 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001931	EMLSAG00000001931-684697	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000008506	EMLSAE00000008506-717434	Lepeophtheirus salmonis	exon
EMLSAE00000008507	EMLSAE00000008507-717435	Lepeophtheirus salmonis	exon
EMLSAE00000008508	EMLSAE00000008508-717436	Lepeophtheirus salmonis	exon
EMLSAE00000008509	EMLSAE00000008509-717437	Lepeophtheirus salmonis	exon
EMLSAE00000008510	EMLSAE00000008510-717438	Lepeophtheirus salmonis	exon
EMLSAE00000008511	EMLSAE00000008511-717439	Lepeophtheirus salmonis	exon
EMLSAE00000008512	EMLSAE00000008512-717440	Lepeophtheirus salmonis	exon
EMLSAE00000008513	EMLSAE00000008513-717441	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771043	auto771043	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001931	EMLSAP00000001931	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1338:61614..66677-

protein sequence of EMLSAP00000001931

>EMLSAP00000001931 ID=EMLSAP00000001931|Name=EMLSAP00000001931|organism=Lepeophtheirus salmonis|type=polypeptide|length=480bp
MDFGKEELRVAEELYRKRINTEKARNIILFIGDGMGLPTISATRIFKAQS
QGSTRGGEESYLSFDKFPHIGLSKVYNVDAQSPDSAAXASALYSGIKTNY
YCVGLDNSCKKGSLESHVNESAWVTNIMTWSQLANKSTGFVTTSRVSHAT
PSSLVAHSALRKWECDKAMPDGASEIGAKDITFQMAKRSPGKKARVILGG
GRTTWRPKQKDVNYDGFNCWRTDGLNLIESWMNKSNVLGMENMKGRYVTT
KDELLELDYENTDYVLGLFSESHMEYVSAEKDSNSQPSISEMTESALKIL
QKNPEGFFLMVEGAKIDKGHHEGKANRALMETSAFDDAVLTALNMTSEED
TLIIVTAXXGHXISFGAYEQRGVDSLPILAYANSPGFNKHYDVDEEKQII
RKEMKDLKYTDPDFLNPAGVQNWESTHSAADVPIYARGPWAHFLHSVHEQ
SYVAHVMSYGACIGPHADRCDDNGGSNVFK

mRNA from alignment at LSalAtl2s1338:61614..66677-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001931-697778 ID=EMLSAT00000001931-697778|Name=EMLSAT00000001931|organism=Lepeophtheirus salmonis|type=mRNA|length=5064bp|location=Sequence derived from alignment at LSalAtl2s1338:61614..66677- (Lepeophtheirus salmonis)
GTTCAATCCGCTGTATTCTCGCCTTCTTCTCGGGGAAAAACCAAGAACGA
AGGTAGTTTGCAAAAATATATTTTATTTATGGAGCAGTTTTTTAATTGAA
CCTTTAATATTCCAGACCAAAAGTATTGGATGGACTTTGGAAAGGAAGAA
TTAAGAGTGGCTGAGGAACTATATCGGAAAAGAATCAATACAGAAAAGGC
GAGAAATATAATTTTATTTATTGGAGATGGTATGGGCTTACCCACGATTT
CTGCAACTCGAATATTTAAAGCACAATCTCAAGGATCTACTCGTGGAGGC
GAGGAGAGTTATCTCTCCTTTGACAAGTTTCCACATATAGGATTGAGTAA
GGTAATTTCAAAATGGATTAAGTATAATGTGGTTTCTTTAAATTTTGTTT
ATATCTATCATGAGTAGTCAAACTGCAATTTTTTCAATGTTTTTATAATT
TCAACCATCTCAACGTCCAAATCATTAATCATTTAGACATTTTAAAGTAT
TTTCAAATATTTAAAAATGTATCTTAATAGACGCCAGGGACAGATAATAA
CTATTCGACAATTGTTTTGGACTACACAATTCAGACGCGTCTAAATCATA
TTATAGTAATTATATCATTTATTGTTCAAGTATAAGACGATATTTAATAT
CCATTAAATTTTGAATCCATGCATTTATCATGAACCTTCCTAAAAGCTTT
ACATCAACCATGAATTGCTATACTTTATCGTAATTCATATTGCTCACTTT
TTTATTTGTTACTCATAAGTTTGTTGTTTATTAGTGTTGTGATAGAATAA
GGCAATTAATTACGTATTTGCGACTCTGAAAAAGTAAAGAAATTACTTTT
TAAACAGCAGGAAGTATTCAAGAGTCCTTGTTTCTTCCCCAAATCACGAG
GCGGATTTAATCTAGTATTTATTTTATTGTTGGCATATGTGATTCAAGGT
GTCAAATTTTGCTCCGAGATATAAAAAAAAATATTTTTTTATTGGGATGG
AGGTATTTTTAAATCAAATAAGTCGTTTACGTACTTTTATTGTAAAAGTT
TTATAATAATAATGTGTTTATAATAATTATACAGATAATTATAATCAGAC
CCGTGACCAAACCTCAGTAACAGAGGAGGAGATATTCTATGTGATCCTAC
CCATAATTGTAACGGGCTTAGTTATATTTAAATTAATGTAAAGATATTTA
CATTATTTTTTTTTTAAATCCAAAATATTCCAATGTAAGACTTAATAATA
TTTATATCATTTATAAAGGTTTTTACGAAGGATTATAAAGAGTTGCCCTT
CGTCATTATTAATAGGAGAAGGTGAACTTCTGAGGTTTTGTTGACTTTTA
AAACTTCCGCACATTTTTCAAAGGATTATACAACATCTTACTTCTAAGTG
ATTATAATATACCTTGATTATCCATTATCATTTTATAAACTTCAATCAAT
TAAGTTACTCCATTTTGTGATCAATGGTTATAGCAAATTTTGCAACTATA
TCATAGAACATAAGAAAAAAGTTTAGATATCTTTTTTTCAGATTTTTATC
CCCGTAGTCTCTTCATCGGATGTGAATTCAACTGTTTTCTTCTCTCAAAT
TCATTTTCTTCTCCACGATTTCATCAAGTACCTATTATTTTTTATAAAAT
TTAGAAGTCGATGAATTTGATAAATTATAACGACTTTCATCCAATTTGTG
ATTTTATTAATTTATTTCAAACCCTTACTCATTTTTTACCATATTAGCGT
ATAGTATATTATATATTTGATCATTCATTCATAGGAGCATCAATGATACT
ATGTACATAATATTTACAATCGATTAAAAAATCGGCTTTTGTCCTCTCCT
AAAGTAGCTTTATTCATAAAGAAATATCCTTTTCTGATTTCCATTGGAAT
TATTTAAAACAAAATTTGAATTAACTTATTTAATCGAAGGAAGAATCAAA
ATTTGAATTGATTAATTTATTTATCATGACTTAAAAAATACCTCAATTTC
ATAATAGCTGAGTCTACCATATTTCCTGCTAATATATATACGTAATTAAT
GAAAGTTTTGTTCACATAGCGTCATTTCAATGTACCAGAGCTATAAAGAT
TACAACTTATTTGTATATTTGATKTCATATTTGTAACATCAGTCAACATC
TGCAATCCAGGAATTATTATTATTTCTATAGATTATTGATAATATTATGT
TGGGGGAAAAGAAATTTTGTATTTCTCGCTCTTTTTTTAATTAAGAATAT
CTTGTTAGCAAAAAGTTATGCAACAGAACGGAGCATACTTGGTTTAAATT
CGATGATTGTAGCACACTTCTTATAAAGCATGGAAATAAAGCGAAAAATA
CGGAATTATTTTTCCCAAACCTATAATTTACGTGAAGACCAAATGCTGTT
ATTGGCAAATGAAGGAAATATATTATTTTTGAAGCAGCTTGCATCATCAT
ACGAACAATTCATACGTAGTTGTGTAAAAAATTCTGAATTAACGAAGGAT
TACATATCTACATATACAGGGGCGTCTTCAGTATATATATATATTGTATA
TCTATTTATTCATTTAAAAAAAAAATCTATGTTTTCAACTTTCTCTAACT
AAATGTAATTCATATTTAATTACAGATTTCATTAGTCATCCCCGGTATGA
CAACAGTTTATTTTGTCTTTACTTCATTGTCGTTCTTTTGTAATTATAAT
TCTGTTGATAAAAACAAACTACTCTCTAATATTTGTAGGTATGTACTTTG
TATCCATTTCGGAAGAAACTGAAATGAATCAGATTTGAAATTCATTAAAT
TAATAATTAGAACAGAGAAAGTGAATATATTATGTATACTTAATCAAAGT
GATTTTTCAAAAGATACACAAAATATATATTAATTTATAATCAATATTTT
YTTTACATTCATTCATAATGTTTAAGAGAAATATAAGGATTTGACTTATA
GGCTGACTTATACTTTCCCTTCAACACCAGGTTTACAATGTGGATGCACA
GAGCCCAGATTCTGCTGCTKCAGCCTCTGCTCTCTATAGTGGAATCAAAA
CCAATTACTACTGTGTTGGCCTAGATAATTCTTGCAAAAAGGGAAGCTTA
GAATCCCATGTCAATGAATCTGCCTGGGTAACCAATATCATGACCTGGTC
ACAACTAGCAAATAAGTCTACAGGCTTTGTGACCACTTCTAGAGTATCTC
ATGCTACTCCTTCAAGCCTCGTAGCCCATAGTGCCCTCAGGAAATGGGAA
TGTGACAAGGCTATGCCAGACGGAGCAAGTGAAATTGGAGCTAAAGATAT
TACATTTCAAATGGCCAAGAGATCTCCGGGGAAAAAAGCAAGAGTGATTC
TGGGTGGGGGTCGTACCACTTGGAGGCCTAAACAAAAGGATGTTAAGTAA
GGGTTTTTCTAAAGTGCGTCGATTTTCATTTTTCATTATCTGAACAGCTA
TGATGGTTTTAACTGCTGGAGAACGGACGGACTTAATTTGATAGAGTCAT
GGATGAATAAAAGTAACGTACTTGGGATGGAAAACATGAAGGGTAGATAC
GTAACAACAAAAGATGAATTGCTTGAACTTGATTACGAGAACACAGATTA
CGTCTTGGGTATGTANTTACATATATTTAACATTCTAAATAATACAACAT
AGATGTTGTTAAGTGTTTGACAGCAAAATTATATATTAGTAAATAATTGT
TTTTTGTTCTTTTATGATACAGTTTCCTTTGAATTTCATATTACTGAGTG
CTTAAAACGACAAAAATGTGTTTTATCTAAGTTTTCAGTTGAACTTATAT
TTACTGCCGTATAAAGTTATTCTTAGAAAAACTGATACAATTTATGTATA
ATGTGATCTCAATGGTAGTTATACCATAATCATTGATTTGGAAATGAGCA
AAATACATTTAATATATATATATTCCATTCAAACGAATGTTTCGTAACAA
TATCATGATTCAAAATTAAGAAAATCTTTGTCTTTCACCACGTCTCTGAT
CTTATATATACTTCTCATAGCGTGTAATTCATGTAAGGGATCGTAAATAT
GAATTTTTAAATACATACATACCAAAATATATTCAACAACGTAGATTTAT
TTACATGTATAAATGACCTTGCCATAGTTATTTATTTAACAGTATTGAAA
TGTTGTTATTGTCTTAGGCTTGTTCTCTGAGAGCCACATGGAGTACGTAT
CAGCAGAAAAAGACTCAAATTCACAGCCCTCTATTTCTGAAATGACTGAA
TCTGCTCTGAAGATACTCCAAAAGAATCCAGAAGGATTTTTCCTCATGGT
TGAAGGAGCCAAAATTGACAAGGGTCACCATGAAGGGAAGGTAAGGAATT
ATTATTTTTTTAGTATTATCTAGTCATACATAAATTGCCCTCTGAAAATT
CACAACAATCCCCANGTCTAAAAGGCAAATCGTGCATTGATGGAAACATC
AGCATTTGATGACGCAGTTTTGACGGCTCTAAATATGACAAGTGAAGAAG
ATACTCTAATAATCGTAACGGCGGYMCKTGGYCACAGMATAAGTTTTGGA
GCCTATGAGCAAAGAGGAGTGGATGTAAGAGGMGACACATAAAATTATTC
TAATCAGCTACTCACACACATAGTATAATTTGGCTTAATTATAAGACCAA
GTGATACAATGATGGGAATGGATCAAAAGTCTCTGCCCATATTGGCTTAC
GCCAACAGCCCAGGATTCAACAAACACTACGATGTTGATGAGGAAAAACA
AATAATACGAAAGGAAATGAAGGATTTGAAATACACAGATCCTGACTTTT
TAAACCCAGCTGGAGTTCAAAATTGGGAATCTACTCATTCGGCGGCAGAT
GTACCCATATATGCACGCGGTAAATATCAATATTTTTTCCTCGGTCCATT
TCTTGTTTCACTTTTTCACACAACCCTTTTCAGGCCCATGGGCACACTTC
TTACATTCAGTCCATGAACAAAGCTATGTAGCACACGTTATGAGCTACGG
AGCCTGTATTGGACCCCACGCAGATCGTTGTGACGACAATGGAGGATCCA
ACGTATTTAAATGA

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