|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1338 | supercontig | LSalAtl2s1338:61614..66677 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001931 >EMLSAP00000001931 ID=EMLSAP00000001931|Name=EMLSAP00000001931|organism=Lepeophtheirus salmonis|type=polypeptide|length=480bp
MDFGKEELRVAEELYRKRINTEKARNIILFIGDGMGLPTISATRIFKAQS
QGSTRGGEESYLSFDKFPHIGLSKVYNVDAQSPDSAAXASALYSGIKTNY
YCVGLDNSCKKGSLESHVNESAWVTNIMTWSQLANKSTGFVTTSRVSHAT
PSSLVAHSALRKWECDKAMPDGASEIGAKDITFQMAKRSPGKKARVILGG
GRTTWRPKQKDVNYDGFNCWRTDGLNLIESWMNKSNVLGMENMKGRYVTT
KDELLELDYENTDYVLGLFSESHMEYVSAEKDSNSQPSISEMTESALKIL
QKNPEGFFLMVEGAKIDKGHHEGKANRALMETSAFDDAVLTALNMTSEED
TLIIVTAXXGHXISFGAYEQRGVDSLPILAYANSPGFNKHYDVDEEKQII
RKEMKDLKYTDPDFLNPAGVQNWESTHSAADVPIYARGPWAHFLHSVHEQ
SYVAHVMSYGACIGPHADRCDDNGGSNVFK back to topmRNA from alignment at LSalAtl2s1338:61614..66677- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001931-697778 ID=EMLSAT00000001931-697778|Name=EMLSAT00000001931|organism=Lepeophtheirus salmonis|type=mRNA|length=5064bp|location=Sequence derived from alignment at LSalAtl2s1338:61614..66677- (Lepeophtheirus salmonis)
GTTCAATCCGCTGTATTCTCGCCTTCTTCTCGGGGAAAAACCAAGAACGA
AGGTAGTTTGCAAAAATATATTTTATTTATGGAGCAGTTTTTTAATTGAA
CCTTTAATATTCCAGACCAAAAGTATTGGATGGACTTTGGAAAGGAAGAA
TTAAGAGTGGCTGAGGAACTATATCGGAAAAGAATCAATACAGAAAAGGC
GAGAAATATAATTTTATTTATTGGAGATGGTATGGGCTTACCCACGATTT
CTGCAACTCGAATATTTAAAGCACAATCTCAAGGATCTACTCGTGGAGGC
GAGGAGAGTTATCTCTCCTTTGACAAGTTTCCACATATAGGATTGAGTAA
GGTAATTTCAAAATGGATTAAGTATAATGTGGTTTCTTTAAATTTTGTTT
ATATCTATCATGAGTAGTCAAACTGCAATTTTTTCAATGTTTTTATAATT
TCAACCATCTCAACGTCCAAATCATTAATCATTTAGACATTTTAAAGTAT
TTTCAAATATTTAAAAATGTATCTTAATAGACGCCAGGGACAGATAATAA
CTATTCGACAATTGTTTTGGACTACACAATTCAGACGCGTCTAAATCATA
TTATAGTAATTATATCATTTATTGTTCAAGTATAAGACGATATTTAATAT
CCATTAAATTTTGAATCCATGCATTTATCATGAACCTTCCTAAAAGCTTT
ACATCAACCATGAATTGCTATACTTTATCGTAATTCATATTGCTCACTTT
TTTATTTGTTACTCATAAGTTTGTTGTTTATTAGTGTTGTGATAGAATAA
GGCAATTAATTACGTATTTGCGACTCTGAAAAAGTAAAGAAATTACTTTT
TAAACAGCAGGAAGTATTCAAGAGTCCTTGTTTCTTCCCCAAATCACGAG
GCGGATTTAATCTAGTATTTATTTTATTGTTGGCATATGTGATTCAAGGT
GTCAAATTTTGCTCCGAGATATAAAAAAAAATATTTTTTTATTGGGATGG
AGGTATTTTTAAATCAAATAAGTCGTTTACGTACTTTTATTGTAAAAGTT
TTATAATAATAATGTGTTTATAATAATTATACAGATAATTATAATCAGAC
CCGTGACCAAACCTCAGTAACAGAGGAGGAGATATTCTATGTGATCCTAC
CCATAATTGTAACGGGCTTAGTTATATTTAAATTAATGTAAAGATATTTA
CATTATTTTTTTTTTAAATCCAAAATATTCCAATGTAAGACTTAATAATA
TTTATATCATTTATAAAGGTTTTTACGAAGGATTATAAAGAGTTGCCCTT
CGTCATTATTAATAGGAGAAGGTGAACTTCTGAGGTTTTGTTGACTTTTA
AAACTTCCGCACATTTTTCAAAGGATTATACAACATCTTACTTCTAAGTG
ATTATAATATACCTTGATTATCCATTATCATTTTATAAACTTCAATCAAT
TAAGTTACTCCATTTTGTGATCAATGGTTATAGCAAATTTTGCAACTATA
TCATAGAACATAAGAAAAAAGTTTAGATATCTTTTTTTCAGATTTTTATC
CCCGTAGTCTCTTCATCGGATGTGAATTCAACTGTTTTCTTCTCTCAAAT
TCATTTTCTTCTCCACGATTTCATCAAGTACCTATTATTTTTTATAAAAT
TTAGAAGTCGATGAATTTGATAAATTATAACGACTTTCATCCAATTTGTG
ATTTTATTAATTTATTTCAAACCCTTACTCATTTTTTACCATATTAGCGT
ATAGTATATTATATATTTGATCATTCATTCATAGGAGCATCAATGATACT
ATGTACATAATATTTACAATCGATTAAAAAATCGGCTTTTGTCCTCTCCT
AAAGTAGCTTTATTCATAAAGAAATATCCTTTTCTGATTTCCATTGGAAT
TATTTAAAACAAAATTTGAATTAACTTATTTAATCGAAGGAAGAATCAAA
ATTTGAATTGATTAATTTATTTATCATGACTTAAAAAATACCTCAATTTC
ATAATAGCTGAGTCTACCATATTTCCTGCTAATATATATACGTAATTAAT
GAAAGTTTTGTTCACATAGCGTCATTTCAATGTACCAGAGCTATAAAGAT
TACAACTTATTTGTATATTTGATKTCATATTTGTAACATCAGTCAACATC
TGCAATCCAGGAATTATTATTATTTCTATAGATTATTGATAATATTATGT
TGGGGGAAAAGAAATTTTGTATTTCTCGCTCTTTTTTTAATTAAGAATAT
CTTGTTAGCAAAAAGTTATGCAACAGAACGGAGCATACTTGGTTTAAATT
CGATGATTGTAGCACACTTCTTATAAAGCATGGAAATAAAGCGAAAAATA
CGGAATTATTTTTCCCAAACCTATAATTTACGTGAAGACCAAATGCTGTT
ATTGGCAAATGAAGGAAATATATTATTTTTGAAGCAGCTTGCATCATCAT
ACGAACAATTCATACGTAGTTGTGTAAAAAATTCTGAATTAACGAAGGAT
TACATATCTACATATACAGGGGCGTCTTCAGTATATATATATATTGTATA
TCTATTTATTCATTTAAAAAAAAAATCTATGTTTTCAACTTTCTCTAACT
AAATGTAATTCATATTTAATTACAGATTTCATTAGTCATCCCCGGTATGA
CAACAGTTTATTTTGTCTTTACTTCATTGTCGTTCTTTTGTAATTATAAT
TCTGTTGATAAAAACAAACTACTCTCTAATATTTGTAGGTATGTACTTTG
TATCCATTTCGGAAGAAACTGAAATGAATCAGATTTGAAATTCATTAAAT
TAATAATTAGAACAGAGAAAGTGAATATATTATGTATACTTAATCAAAGT
GATTTTTCAAAAGATACACAAAATATATATTAATTTATAATCAATATTTT
YTTTACATTCATTCATAATGTTTAAGAGAAATATAAGGATTTGACTTATA
GGCTGACTTATACTTTCCCTTCAACACCAGGTTTACAATGTGGATGCACA
GAGCCCAGATTCTGCTGCTKCAGCCTCTGCTCTCTATAGTGGAATCAAAA
CCAATTACTACTGTGTTGGCCTAGATAATTCTTGCAAAAAGGGAAGCTTA
GAATCCCATGTCAATGAATCTGCCTGGGTAACCAATATCATGACCTGGTC
ACAACTAGCAAATAAGTCTACAGGCTTTGTGACCACTTCTAGAGTATCTC
ATGCTACTCCTTCAAGCCTCGTAGCCCATAGTGCCCTCAGGAAATGGGAA
TGTGACAAGGCTATGCCAGACGGAGCAAGTGAAATTGGAGCTAAAGATAT
TACATTTCAAATGGCCAAGAGATCTCCGGGGAAAAAAGCAAGAGTGATTC
TGGGTGGGGGTCGTACCACTTGGAGGCCTAAACAAAAGGATGTTAAGTAA
GGGTTTTTCTAAAGTGCGTCGATTTTCATTTTTCATTATCTGAACAGCTA
TGATGGTTTTAACTGCTGGAGAACGGACGGACTTAATTTGATAGAGTCAT
GGATGAATAAAAGTAACGTACTTGGGATGGAAAACATGAAGGGTAGATAC
GTAACAACAAAAGATGAATTGCTTGAACTTGATTACGAGAACACAGATTA
CGTCTTGGGTATGTANTTACATATATTTAACATTCTAAATAATACAACAT
AGATGTTGTTAAGTGTTTGACAGCAAAATTATATATTAGTAAATAATTGT
TTTTTGTTCTTTTATGATACAGTTTCCTTTGAATTTCATATTACTGAGTG
CTTAAAACGACAAAAATGTGTTTTATCTAAGTTTTCAGTTGAACTTATAT
TTACTGCCGTATAAAGTTATTCTTAGAAAAACTGATACAATTTATGTATA
ATGTGATCTCAATGGTAGTTATACCATAATCATTGATTTGGAAATGAGCA
AAATACATTTAATATATATATATTCCATTCAAACGAATGTTTCGTAACAA
TATCATGATTCAAAATTAAGAAAATCTTTGTCTTTCACCACGTCTCTGAT
CTTATATATACTTCTCATAGCGTGTAATTCATGTAAGGGATCGTAAATAT
GAATTTTTAAATACATACATACCAAAATATATTCAACAACGTAGATTTAT
TTACATGTATAAATGACCTTGCCATAGTTATTTATTTAACAGTATTGAAA
TGTTGTTATTGTCTTAGGCTTGTTCTCTGAGAGCCACATGGAGTACGTAT
CAGCAGAAAAAGACTCAAATTCACAGCCCTCTATTTCTGAAATGACTGAA
TCTGCTCTGAAGATACTCCAAAAGAATCCAGAAGGATTTTTCCTCATGGT
TGAAGGAGCCAAAATTGACAAGGGTCACCATGAAGGGAAGGTAAGGAATT
ATTATTTTTTTAGTATTATCTAGTCATACATAAATTGCCCTCTGAAAATT
CACAACAATCCCCANGTCTAAAAGGCAAATCGTGCATTGATGGAAACATC
AGCATTTGATGACGCAGTTTTGACGGCTCTAAATATGACAAGTGAAGAAG
ATACTCTAATAATCGTAACGGCGGYMCKTGGYCACAGMATAAGTTTTGGA
GCCTATGAGCAAAGAGGAGTGGATGTAAGAGGMGACACATAAAATTATTC
TAATCAGCTACTCACACACATAGTATAATTTGGCTTAATTATAAGACCAA
GTGATACAATGATGGGAATGGATCAAAAGTCTCTGCCCATATTGGCTTAC
GCCAACAGCCCAGGATTCAACAAACACTACGATGTTGATGAGGAAAAACA
AATAATACGAAAGGAAATGAAGGATTTGAAATACACAGATCCTGACTTTT
TAAACCCAGCTGGAGTTCAAAATTGGGAATCTACTCATTCGGCGGCAGAT
GTACCCATATATGCACGCGGTAAATATCAATATTTTTTCCTCGGTCCATT
TCTTGTTTCACTTTTTCACACAACCCTTTTCAGGCCCATGGGCACACTTC
TTACATTCAGTCCATGAACAAAGCTATGTAGCACACGTTATGAGCTACGG
AGCCTGTATTGGACCCCACGCAGATCGTTGTGACGACAATGGAGGATCCA
ACGTATTTAAATGA back to top
|
