EMLSAT00000003256, EMLSAT00000003256-699103 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003256
Unique NameEMLSAT00000003256-699103
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1790supercontigLSalAtl2s1790:29052..30359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003256 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003256EMLSAG00000003256-686022Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014239EMLSAE00000014239-723167Lepeophtheirus salmonisexon
EMLSAE00000014240EMLSAE00000014240-723168Lepeophtheirus salmonisexon
EMLSAE00000014241EMLSAE00000014241-723169Lepeophtheirus salmonisexon
EMLSAE00000014242EMLSAE00000014242-723170Lepeophtheirus salmonisexon
EMLSAE00000014243EMLSAE00000014243-723171Lepeophtheirus salmonisexon
EMLSAE00000014244EMLSAE00000014244-723172Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769833auto769833Lepeophtheirus salmonispolypeptide
EMLSAP00000003256EMLSAP00000003256Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003256

>EMLSAP00000003256 ID=EMLSAP00000003256|Name=EMLSAP00000003256|organism=Lepeophtheirus salmonis|type=polypeptide|length=87bp
MEKYKSRNNNDTWSTICFNKDSSLQFAKASCQQLGYASGKFESTTLENKE
SSNYKGFSSNVSLTDIKKIDAKILDDIPVCDSNLKTI
back to top

mRNA from alignment at LSalAtl2s1790:29052..30359+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003256-699103 ID=EMLSAT00000003256-699103|Name=EMLSAT00000003256|organism=Lepeophtheirus salmonis|type=mRNA|length=1308bp|location=Sequence derived from alignment at LSalAtl2s1790:29052..30359+ (Lepeophtheirus salmonis)
ATGGAGAAATACAAATCTAGGTATGTTTTTACTCTGATAGTTTTTASTTC
ATGTTTAAACAAAATGTTATCGATTTTAGGAACAATAATGATACTTGGTC
AACCATTTGTTTTAATAAAGACTCATCTCTCCAATTTGCAAAAGCTTCTT
GTCAGCAATTAGGATACGCTTCTGGTAAATTTGAAAGTACTACCTTAGAA
AATAAAGAATCATCTAACTACAAGGGTTTCAGCTCCAATGTATCTCTAAC
CGATATTAAAAAAATTGATGCAAAGATCTTAGATGACATACCAGTCTGTG
ACAGCAATCTCAAGACAATTTGTGAGGAATTTGGAATGTTTATTATCCCA
TCTACTTTTTCTTTAATTATTTGTGAATATATTTATTTATAGAATGTTCA
AAACGAACACTTACTGAGAGACAAATAAAGGAATTGAAGGCCCAAAGCAC
CATCAACATTACCTGTCTAACCTCAGAGAATGAACTTTGGCCTTTTTTAG
CATATCTATTTAATGTAAAAAGGAAAACAASTTGTGATGTTACAATTTTA
AATCCGGAGTGGTTGATTACCTCGCATGGATGTATGGKTGAGAGGTTTGT
AACCATATTCATTTATTTCAAAAGAGGTTTTGTAATATTTTTTATAATAG
ATCAATGGATCCTTTGGAATAGGTAGCCTTTGCTGGCCCTTCTAATGGAC
AAACAGATCAATCAAACACTCAAATTAATATAGTAAAGAGAATAGTTTCA
AATCCCTCAGTACGATTCCAGAAAGGATATTATACTGACGATTTGGCTCM
TATTYAACTAAATGATCCTTTGATCTTSAACGWTCATGTTKAAGCCACTT
GTTTGGAAAAGTTTTCTCTTAAAAATAACATTTGCTTTGTAGCAGGATGG
GCAGATGTAAATAAGGAGGGTAAGTAAAGCAACAGCTCATTGATTAGTAA
TTATACTAATATTTGATTATTTTTTTACATACTACATTCATAGGTGTAAT
CTTTATACAATACCTCGACAGAATACCATGTAATTCACAGTCATATTATA
ACAAATTACTAAATGGTAATTCTTTGTGTACTTTATCTAAACACCAAAAC
ATCCTGTGTAGAGTAAGTTTAATAGCTTTCAAATATAGCCAAGGATGTGA
AATATGCAATCTTCTTTAATTTTTAGATGGACAATGGAGCGCCACTTTTG
TGCTACCAGGGTGATAGATGGAGACTTTGTGGTATTTTAAGTAGGGAAGG
GAGTGCCTTCCGTCAACTCTTCCAGATATTTTCACATGTGTTGATTCATG
GAAAGTAA
back to top
Add to Basket