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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| LSalAtl2s181 | supercontig | LSalAtl2s181:277137..281454 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000003308 >EMLSAP00000003308 ID=EMLSAP00000003308|Name=EMLSAP00000003308|organism=Lepeophtheirus salmonis|type=polypeptide|length=889bp
MTIGNSSRFRCRRVVSYLFSFFLIVTGVVGQDSSEAKGRSGLSSAVMLTL
GDIKEVSNNGGFFGPQHLLAASAAAAQQLLQPPGSLKLQESSVGRGIGIW
AAERIPLGTRYGPFLGKWALEPGDHRFAWEVIISSAGVRGFLDATHYGSW
LKNLQSVPSHRLDYNVKNVLIGGQIYYETLRDIYPGEELILHPKEPILLD
GERSSLSSPSRGSSHKEEGFNEGSSLRRVPGGGPPNTGEEDILITTEEEQ
ELEGVKCLNCDKNFEDIYILDDHMSDAHGFERDKYICEHCPKKFSWRPNL
LRHKMIHGEYRRFPCENCDKVFTDPSNLQRHIRTNHVGARSHACPECGKT
FATSSGLKQHTHIHSSVKPFRCEVCFKSYTQFSNLCRHKRMHVNCRMQIK
CTKCNLAFSTVTSLSKHRRFCDSKPPNPSFQQSTLCSEDSLLPKGSSSVS
GMSEDSPLTRSPYPHHPPSSSYGSLLGSGTGSTHPPPPFSLFSNPLSFPT
MLQRLAAAHQFQQRLQXQPLNHSHLISSQKMEETEDDLDENRNERASPSP
RAQFAPPSSPPTSTSVPITTTATTTTTPLDLSLWKKTCSEQENNSESDER
PVSPPRGFQQVMEGKPFIPVKDQVLRHPFLEAFYRLHANRVPLFPHPTTL
PPGANSGGYTPYFHNGSRGSTNPNCVLSXGGGISPVSGGDGPSPTTDLLS
GGAGSVAGLLELGGKGSKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYK
CRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRSFGQQTNLERHLKKH
ENCADPSAIVDSPEPRTEDEEDEEEMEEEALDEEDEALEEEEEDGIMEEF
RSFMGKVRDLSSAAXAAAXXSKNNSSTAPSLHQDLLLNN back to topmRNA from alignment at LSalAtl2s181:277137..281454- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000003308-699155 ID=EMLSAT00000003308-699155|Name=EMLSAT00000003308|organism=Lepeophtheirus salmonis|type=mRNA|length=4318bp|location=Sequence derived from alignment at LSalAtl2s181:277137..281454- (Lepeophtheirus salmonis)
ATGACTATAGGAAATAGTAGTCGTTTTCGCTGTCGTCGTGTCGTGTCGTA
TCTCTTCTCTTTTTTCCTCATCGTCACTGGTGTTGTTGGTCAGGATAGTA
GTGAGTTGATCATCTTCAATGGAAGTGCTCACTTATAGTCTGAGAGAGTA
TTCATCCCATTGAATCCCTGTTCTCGTTACTGTGTGCTAGATATTTCTGT
GCTTTGTTATTTTTTTAAGAGCTAAAGGACGGAGTGGTCTCAGTAGTGCG
GTGATGCTCACCTTAGGAGATATCAAAGGTAAGACTCAACTCTTGTCAAT
CAAATAACAACACACCTTATCTCTTCATTGTAAATTAAAGAAAAAATGTT
TTATAAGCCCATTTTACATATTTGAAATGATAAGAGCTTCAAATAAGCCT
GATAGATAATATTTATAGTAAAATCTTCCCTTCTTCACGATAAGACAAAC
TCAATAATCTCTCTTTCAATTCAATTCAGTAGTTTAAACGTTACGATTAC
AGCTTTTCCTTCCTCTCTTTCAGAAGTTAGTAATAACGGGGGGTTCTTTG
GACCTCAACATCTATTAGCAGCCTCTGCTGCAGCCGCCCAACAGCTTTTA
CAGCCTCCAGGATCCCTTAAATTGCAGGAATCATCCGTGGGACGAGGTGA
GGGAACCAGCTCTTTTATAATTCATCTTTATAAGCCACTTTTTCTTAGGG
ATTGGTATTTGGGCAGCGGAGCGGATACCTCTAGGGACACGCTATGGCCC
TTTTCTTGGGAAGTGGGCGCTTGAGCCAGGGGATCATCGATTTGCTTGGG
AGGTAAGATTTTATGCTCAATAACAGAGAGTCTATCATGGTCAAATAATA
TGTAGAGCCCTACTCTTCCTCTATATAAAGCAGATGAACCTCAGAGGATT
TGACAAATTTTATATGTATATATACATATAAATATTGATTTATAAACGAA
CCATATAATTGGGGTGAGGAACAGATGGAAAAAAAAAAAAATAGATTATA
CACAGAGTGTGATGTAGAATGAAAATAAATAAAATGAAAAACCGCCCAAT
GACTTCTTTTTAAATAATAAAAAATGGAGATGCTATGATATAATAACCCA
CAGACTAGAGAGCAGCAGATTACGACTCCTATATATCTATTCTCTGTGTA
ACGGAATTATCGTTACTTTAACTGTTCATAGAATAGCCTTCTATGAAGGC
ATATGAAAAATCATATTCACCTATGTAATCGGATCTCCTCTCTGCATTTA
TAAAAACAAAAACAAAAAAAAACATACACTCAATTAAAGAATAAAAAGTC
GTCTTTAATTCTCTCCTTTATTTTTGCTTTTGCTGACTTGACAAATTAAT
TATATGACTACTACATAATAACCTACCTTCAAGTTAATCAAAATCTGTTC
TTCTTGACTCAACGAAAAAAAAAGAAAAGAAAAAGCAATACAAGATCTTT
TCCTTGGAATGCATGCAACTCATCTGATGACGTATTTCATTCTCTTTAGG
TCATTATTAGCTCAGCAGGAGTACGTGGTTTCCTAGACGCAACTCACTAC
GGAAGTTGGCTGAAGAATCTTCAATCCGTGCCCTCACATCGCCTCGACTA
CAACGTCAAAAACGTGCTCATTGGGGGTCAAATCTACTATGAGACACTTC
GTGACATTTACCCTGGTGAAGAGTTGATTCTACATCCCAAAGAGCCCATC
CTTCTCGACGGAGAGCGATCTTCTCTCTCCTCTCCAAGTAGAGGGTCCTC
CCATAAGGAAGAGGGGTTTAATGAAGGGTCGTCCTTACGGAGAGTACCTG
GAGGAGGACCACCTAATACTGGAGAGGAGGACATACTCATCACGACAGAG
GAAGAGCAGGAGTTGGAAGGGGTCAAGTGTTTAAACTGCGATAAGAACTT
TGAGGACATTTATATGTAAGATCATTATTTTCAAACCTTTATAATTCCCA
TGTTTCTAAAACCCACATTTCTTAGATTGGATGACCACATGAGCGATGCA
CACGGCTTTGAGCGGGACAAATATATTTGTGAGCACTGTCCCAAAAAGTT
TTCTTGGAGGCCAAATCTCCTTCGTCATAAAATGATTCACGGAGAGTATC
GGCGTTTCCCCTGTGAGAATTGCGATAAAGTAAGATACTCTCAAGACTTG
TAGATGTTGAATAATCCTTGATTTTCCATTCATCAGGTATTCACTGATCC
CAGTAATCTCCAAAGACATATTCGTACAAACCATGTGGGCGCAAGAAGTC
ATGCCTGTCCGGAATGTGGAAAGACATTTGCCACAAGCTCTGGCCTCAAG
CAACATACCCATATTCATAGCTCTGTGAAGCCTTTTCGCTGTGAAGTCTG
CTTCAAGAGCTACACTCAGTTTTCAAATCTATGCAGGTAATTGTGAATTA
CTATTTATATAATGGTTGGTTGGTTGAGTACATATCTTGTTAAAGGATCT
CAACAACAATAACAGTTCTCAGTAGTATGTAGTCGTCATAGATGACAGGC
CCCTGATAAGATATTTGTACATTCATATGAATGTGTAGTTGTATATTTTA
ATCAAGGATAACCTGAATAGTGTCGTTAACAAACCAATGCGGTTATAAAA
ATAAATAAAAACTTTTTTTTTCTTCCATTTTTTTTGTTATTCTTGTTAAA
AGCTGTAAATAACAAAGTGTCAGTTTCTCATCAAAGTTATTTTTCTATGT
CTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTTTTCCCACAGTGTGTGTTT
GTGATAATTACGTCTGATAGGTTGAGTCCTTTACTTTATTGTATTTTTTT
ACTTGCAGACATAAGCGAATGCACGTGAATTGTCGTATGCAAATCAAATG
CACAAAATGCAATCTGGCTTTTAGCACAGTGACGAGCCTTTCCAAACATC
GTCGCTTCTGCGACTCCAAACCCCCAAATCCTTCCTTTCAGCAGTCAACT
CTTTGCTCTGAGGACTCTCTCCTTCCCAAGGGAAGTAGCAGTGTCAGCGG
TATGTCTGAGGACTCCCCCCTCACACGGTCCCCCTATCCTCACCATCCAC
CTAGTAGCTCGTATGGTTCTCTCCTTGGCTCTGGGACTGGCTCTACTCAT
CCTCCACCACCCTTCTCACTCTTCTCCAATCCTCTCTCCTTCCCAACCAT
GCTCCAAAGACTTGCAGCTGCTCATCAGTTCCAACAGAGACTYCAGGAMC
AGCCACTCAACCATTCTCATCTCATTTCCTCTCAGAAAATGGAGGAAACA
GAAGATGACCTGGATGAAAATCGCAATGAAAGAGCCTCTCCATCACCAAG
GGCCCAATTCGCACCACCCTCTTCCCCACCGACATCCACTTCGGTCCCAA
TCACGACCACCGCCACAACTACGACAACCCCTCTGGATCTGAGTCTATGG
AAAAAGACTTGTTCAGAACAGGAGAACAATTCTGAGAGTGATGAAAGGCC
TGTTTCTCCTCCGCGGGGATTCCAGCAAGTCATGGAGGGCAAGCCTTTCA
TCCCTGTCAAGGATCAGGTCCTTCGACATCCCTTTCTAGAAGCCTTTTAT
CGACTCCATGCGAACCGAGTTCCCCTCTTTCCACATCCGACAACACTTCC
CCCTGGTGCGAACAGTGGCGGTTATACACCATACTTTCACAACGGAAGCA
GGGGTAGCACCAACCCCAATTGCGTCTTGAGCAGKGGTGGAGGAATATCT
CCGGTCTCAGGAGGAGATGGGCCTTCTCCTACAACTGATCTACTCAGTGG
AGGAGCTGGAAGCGTTGCCGGACTCCTCGAACTCGGAGGTAAAGGCTCGA
AAGATCGGTACTCTTGCAAATTTTGTGGTAAAGTATTTCCACGCTCAGCA
AATCTAACGCGACATTTGAGAACCCACACGGGAGAGCAGCCTTACAAGTG
CCGATATTGTGAGCGCTCCTTCTCCATTAGCTCGAATTTACAAAGACATG
TTCGAAATATTCACAACAAGGAAAAACCATTCAAATGTCCTCTCTGTGAT
AGGAGCTTTGGGCAACAAACGAATCTAGAGCGACATCTCAAGAAACATGA
GAACTGCGCGGATCCCTCGGCCATTGTGGATTCTCCAGAGCCACGAACAG
AAGATGAAGAGGATGAAGAAGAAATGGAAGAAGAGGCTCTGGACGAGGAA
GACGAGGCTCTGGAAGAAGAAGAAGAAGATGGGATCATGGAGGAGTTTAG
GAGCTTTATGGGTAAAGTGAGGGATCTGAGCAGTGCGGCAGSAGCTGCGG
CGKCTAAMAGCAAGAACAATAGCAGCACAGCTCCGAGTCTCCATCAGGAT
CTCCTCCTCAATAATTGA back to top
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