EMLSAT00000003383, EMLSAT00000003383-699230 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003383
Unique NameEMLSAT00000003383-699230
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1864supercontigLSalAtl2s1864:7807..9540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003383 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003383EMLSAG00000003383-686149Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000014763EMLSAE00000014763-723691Lepeophtheirus salmonisexon
EMLSAE00000014764EMLSAE00000014764-723692Lepeophtheirus salmonisexon
EMLSAE00000014765EMLSAE00000014765-723693Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768733auto768733Lepeophtheirus salmonispolypeptide
EMLSAP00000003383EMLSAP00000003383Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003383

>EMLSAP00000003383 ID=EMLSAP00000003383|Name=EMLSAP00000003383|organism=Lepeophtheirus salmonis|type=polypeptide|length=80bp
MKVFVVISALLALASANQSSHQTIQHGHAAPVHTSIHRPHGVHHASVVSQ
PAADPSDVHNPYTADYKPIAASFQIYMLSL
back to top

mRNA from alignment at LSalAtl2s1864:7807..9540-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003383-699230 ID=EMLSAT00000003383-699230|Name=EMLSAT00000003383|organism=Lepeophtheirus salmonis|type=mRNA|length=1734bp|location=Sequence derived from alignment at LSalAtl2s1864:7807..9540- (Lepeophtheirus salmonis)
ATGAAGGTACTGGGAAACAAACTAATATAACATACAAACATCTAATCATT
CACTTTTTTATCAGGTTTTCGTTGTTATTTCCGCTCTTTTGGCTCTTGCC
TCTGCTAACCAATCCAGTCATCAAACCATCCAACATGGACATGCTGCTCC
TGTCCACACCTCCATCCACAGACCTCATGGTGTTCATCATGCTTCCGTAG
TCAGCCAACCCGCTGCTGATCCCTCTGATGTTCACAACCCCTACACTGCT
GACTACAAGCCTATTGCTGCTGTCCACGCYCCAGCTCATGCCCCAGTTCA
CGCTCCCTATCACCCTGCTCCTTACCATCCGGATCCTTATCACCCAGCTC
CCTATCKCCCTGCTCCTTACCATCCGGCTCCCTACCKCCCAGCCCCTGTT
GTTCACAGACCAGCTCCTTACCACCCAGCTCCCGTTGTCCACAAGCCTTC
TCCCTATCACGCTGCTGAGATCTACGGTGATAGTCCCGCCGTCTACCAAT
ACGGATATGCTGTCGCTGATGACTATGCTGGAACCAACTTCGCTGCCAAC
GAGAACAGAGACGGATACTCCACCAACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAATGGATCCAAGTTAAAACTTGTTATTGGATTTTCA
TTTTAATTAATGATTCTTGATCCTATTTAAGTCATCTATTTTTCAAGCCA
TTCCAATCATAGATTTGGCTTCCTATTTCAYAATAAATTTCTATTTTGAA
ATTTACATTGTTATTTAGTTAATTATTCTTGAAATAATTAAAGTTGTCAT
ATATTTTTGTATAAAACCAAACATAGGAAATTATATATTTTTTAAATATT
TGAGAGCTTCCAAATATATATGCTTTCACTTTAA
back to top
Add to Basket