EMLSAT00000003661, EMLSAT00000003661-699508 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000003661
Unique NameEMLSAT00000003661-699508
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
K F77 UN8_g528 female
  1. PreAdult2
  2. Adult
-Missing-
female reproduction
03.04.2013 - 14:49
13.05.2013 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s199supercontigLSalAtl2s199:96562..99119 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000003661 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000003661EMLSAG00000003661-686427Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000015937EMLSAE00000015937-724865Lepeophtheirus salmonisexon
EMLSAE00000015938EMLSAE00000015938-724866Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772026auto772026Lepeophtheirus salmonispolypeptide
EMLSAP00000003661EMLSAP00000003661Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000003661

>EMLSAP00000003661 ID=EMLSAP00000003661|Name=EMLSAP00000003661|organism=Lepeophtheirus salmonis|type=polypeptide|length=507bp
MLLQEVVMPCLFEASFKTGRIHPQSTMKRLNVNILISFLNGYSHWSLSKK
FGSYVLKFNAGIGLKHRITKFNPRKWNDKKCIKKKIAPASIDKGRANVSP
SKKKKGNEKKKIEKHVQNGSRLYHHQQTKKHPKVRQRINSGEGSSEADSL
SWDDYDVAAHKRRQGIHTLENVESLISTYSSPSLSSSSASSKESTPEMHQ
EGKLLLQEMKELRKEIKKMGDTSVLENNTHSKVIQLLPTDYSIEELQEMM
NKMEEEDRCWDSGYNDKEFSSDKEEDMRFKEISSEREYSESIVPEDFDEK
LQESDDEEVPFDLEEVHSSHEEEDDVSISESLGSSIVVELSTSSKNMAQY
IGATTGARTQISKNQKKKQKRQRAKLRHKNVTRYTAPIAPSGSRNKRSAW
SPYHTTRWANYCANTPTPDKEIVAGMDSILGRETINKNLTPTPIMKGRTV
IYKNLFAWEVSFCDTKERYKELLQKKFVQDQLKLQSILDNSFHSENTMAI
GRSITVS
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mRNA from alignment at LSalAtl2s199:96562..99119+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000003661-699508 ID=EMLSAT00000003661-699508|Name=EMLSAT00000003661|organism=Lepeophtheirus salmonis|type=mRNA|length=2558bp|location=Sequence derived from alignment at LSalAtl2s199:96562..99119+ (Lepeophtheirus salmonis)
ATGTTACTCCAAGAAGTTGTAATGCCTTGTTTATTTGAGGCCTCTTTTAA GACAGGTATAGTAGTGTACTAGCTTGGCTTTCTCTTCCTTCTGAATGTTT GATTGTAATTAGAAATGGGAAGTTAGGGGCAAAGGCAAATCTCTAGAGTG TTTTTTTTTCTTCATTGATTTGTGATCTGTGTTTGTTTATTTCCGGTGTC AGTTGATATGATTGAGGTAAGCACATGAATATTGAATGACTTTTAAATGA GGCAGTTATTTCTATGTCAATGTATCATTACTCACACTCTAAGTACGTAT GAAGATACCAGCTTTTGGCTCATGTCCAGTTTTATTTATTTGTCATAAGT ATACTTTCTTATCAGTTTGAATCGAACTTACTTTATGTCAAGGATTTGAA ATAATAAGAAAAAAACAACAATTGAATGACTTTCTAATTTTTCTCTCTTT TCCAGGACGAATTCATCCCCAGTCGACTATGAAAAGGCTGAACGTGAATA TCCTTATATCATTCCTCAATGGATATTCGCATTGGAGTTTATCTAAGAAA TTTGGGTCCTATGTCCTCAAGTTTAATGCTGGTATTGGCTTAAAACATCG GATTACAAAGTTTAATCCACGAAAATGGAACGACAAGAAATGTATTAAAA AAAAGATAGCRCCTGCATCCATTGATAAAGGCAGAGCCAATGTGTCTCCA TCAAAAAAAAAGAAGGGCAATGAAAAGAAAAAGATTGAAAAACATGTGCA AAACGGGAGTCGACTCTATCATCATCAACAAACCAAAAAGCACCCCAAAG TTCGCCAACGTATCAACTCTGGAGAAGGGAGTTCCGAAGCGGATTCCTTA TCATGGGATGACTACGATGTTGCTGCTCACAAAAGGAGACAGGGAATACA TACCCTTGAGAACGTTGAGTCTCTCATCTCAACTTATTCCTCTCCTTCCC TAAGTTCTTCTTCCGCCTCATCCAAGGAGTCCACTCCAGAGATGCACCAG GAAGGAAAACTTTTACTTCAGGAAATGAAGGAACTCAGAAAGGAGATTAA GAAAATGGGAGATACTTCTGTCCTTGAGAACAACACTCACTCCAAGGTGA TACAACTACTTCCAACGGACTATTCAATTGAGGAACTCCAAGAAATGATG AACAAAATGGAGGAAGAGGATCGTTGTTGGGATTCTGGATATAATGATAA GGAATTTTCATCTGATAAGGAAGAAGATATGCGATTCAAAGAGATTTCAT CCGAGAGAGAGTACTCTGAGAGCATTGTTCCGGAGGACTTTGATGAAAAG CTTCAAGAAAGTGATGATGAAGAAGTCCCTTTTGATCTCGAAGAAGTTCA TTCCTCACACGAAGAAGAGGATGACGTATCTATATCAGAATCTTTAGGCT CATCCATTGTTGTGGAGCTGAGTACTTCCTCAAAAAATATGGCTCAATAC ATTGGGGCTACTACAGGAGCACGTACTCAAATTTCCAAAAATCAAAAGAA AAAACAAAAAAGGCAAAGAGCAAAGTTACGCCATAAAAACGTGACGCGAT ACACAGCTCCCATTGCTCCTTCAGGAAGCCGGAACAAACGCTCAGCTTGG TCTCCCTATCACACAACAAGGTGGGCCAATTACTGTGCAAATACTCCAAC CCCAGACAAAGAAATTGTTGCAGGCATGGACTCCATTCTGGGTAGGGAAA CCATAAATAAAAACTTGACTCCCACTCCTATCATGAAGGGACGGACCGTC ATCTACAAGAACCTCTTCGCATGGGAAGTTTCATTTTGTGATACAAAGGA GCGTTACAAGGAATTACTTCAAAAGAAATTTGTTCAGGATCAGTTAAAGC TTCAATCCATCCTGGACAATAGCTTTCATTCAGAGAACACAATGGCCATT GGAAGAAGCATTACGGTTTCTTAAAGGCACAACTCTCGTTTTTATTTTCT AGTCATAAATCTTCCTCTTTTAAAAAGAAGGAGTCTGACTCCAACAGAAA GTAACGGAGGAGTCCCGTGATTAAAATTATCCTATCCATGTATAGTTTTT CGGAGTGTCAAGTCTGATGATTAAGCAAAGAGCTTGTCTCTCGATTAATC TACATACCTATTAAAAGTTATAGAATCATTTTATGGATATTGAGTGAAAC CTTTTGGAAATCAAAAACAAGAAACAAAGTCTCTTCATTTTTGAATGTGG TGTGAAGACTCATAGTCTTGGATTTGGAGTACATTACTTCATACTGAAAC TTCATTCAACCATCATAATAAGCTATTTTTCAGTTTCTGTAAACTATTTA TAAATATCTTTTTCTTTGCACAGAGTATTTTGTCAAAAACAAAAAAAACA AAAAAAAAACATATTCTCATCAACACTTACCTAAATCCGTATATGACTAG TTATAGGCTTCCATTATAAAAGAACAAAACGTGTATTTCCCTGTATTGTT ACGAAGATTGGTGATTTTATATTTTTTATACTGATCTTYAYKATGRATWT TTMGTTTGCTTGTAAAAAAACATAAAAAAACCCTACTGAGTTAATCCGGG AAAACCAT
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