EMLSAT00000003800, EMLSAT00000003800-699647 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000003800
Unique Name	EMLSAT00000003800-699647
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s2069	supercontig	LSalAtl2s2069:97..7472 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000003800 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000003800	EMLSAG00000003800-686566	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000016530	EMLSAE00000016530-725458	Lepeophtheirus salmonis	exon
EMLSAE00000016531	EMLSAE00000016531-725459	Lepeophtheirus salmonis	exon
EMLSAE00000016532	EMLSAE00000016532-725460	Lepeophtheirus salmonis	exon
EMLSAE00000016533	EMLSAE00000016533-725461	Lepeophtheirus salmonis	exon
EMLSAE00000016534	EMLSAE00000016534-725462	Lepeophtheirus salmonis	exon
EMLSAE00000016535	EMLSAE00000016535-725463	Lepeophtheirus salmonis	exon
EMLSAE00000016536	EMLSAE00000016536-725464	Lepeophtheirus salmonis	exon
EMLSAE00000016537	EMLSAE00000016537-725465	Lepeophtheirus salmonis	exon
EMLSAE00000016538	EMLSAE00000016538-725466	Lepeophtheirus salmonis	exon
EMLSAE00000016539	EMLSAE00000016539-725467	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto767793	auto767793	Lepeophtheirus salmonis	polypeptide
EMLSAP00000003800	EMLSAP00000003800	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s2069:97..7472-

protein sequence of EMLSAP00000003800

>EMLSAP00000003800 ID=EMLSAP00000003800|Name=EMLSAP00000003800|organism=Lepeophtheirus salmonis|type=polypeptide|length=1680bp
MVLSMGGGAGSGGLDVVAPQHQGAGGGQVSLGMLTEFIVQRTYHELSILS
ELLPRKEDMERKIEIFNFASRTRMLFIRLLSLVKWASSASKVDKCGSIIN
YLERQXRXFXETADSXAKIARDSLPRAXLPNFNLPSAVEILTTGSYSRVP
RIIRDKIVAPEPISCMDKKKTLLKLNQVIEHRLVTSNLPLQMRHLHIADG
RVTFMVHNEFKASLTLIGEGPSVPWRLLNVQILVEDRDTGEGKALMHSMQ
STKLIRERLGNYIRVEEYRLGKXLTVSYWRGWMXKDPAXELGYRFSVQTD
PNYPGRPHMVVHSPVLTKEESETAEKAMKSDHLSLERLLVHSIYVRTKSR
LRALKTDIEKRLKLNDGHASLHGSPAILSVPILQPCLRSEQLIIAIDTHS
GIFLVHVPGYESNPYTSEIQRNLNEDKSKLEPLISQLRIWITKNRVHKTL
QQXPATSYETLPILFDQDKHHPLKDLSPNRMYIRLNHHSNAIIIIEFKEK
ELNQCEMDYSYYFLWVKPSSIDEDDSNRESSNKIVPSVYFKALSMIELDS
FLVTHGPGTKVDIQDFSETILGKRKIPSKSDTPIKRTKYPAYFISDLAHV
VAFANERIPFIGIISECDNLNVSHSGIEVEENEIGVFMTIIAFPSVSGVS
DDEVSRLRKYLLSTSIRLQSRQGRSWKVEFIFIDNPVTSVQDKNRYPVYF
NYDVTIPEQTVVKRILHEWEQMAHLYSVVEDLVDFLDSSESSESANIRIK
SYNFKELVLEYGPYFKSTVRIKWKAEESKFSLIFSGIHEFSSTNPHILLR
EQLTQHLNEHRDLPWLGKILHETYPPLRSIARLPTTPQMGVTQQRMSIQT
FSIIPQGPTHIKLVFYNSYFLDIQIKQGGIVYIRDGAFSVFDQRKVVEGA
QPIQGLKTFLMKYIDESVFHRRQSQTEDDNPPSPMSTDDTSNSGLRFNTP
HTPPSNPMTPASPHTVGFLQSPPSSIRNPSPASQPVPSPGTSSVRSPLNH
PIGSPFHSSSVPSPLAVGSPVTQRPSSKPGYHGSTFTSRALPRLLPQRLW
AGANPTPLTLNAFDDICKPSILIPPNGSGNSPFVPTNMSNISPLYRFLGC
VYLKRYLLNCIKVEDFLTLLPTNEVGIISFKVEKLNCRVASWPGNSFQSL
HLKVQPEDGNQWPPEMLLLLERFFDTKVAAPPYRLIMMSSFISILRCPTE
VLRDMIQVMKFDLMPDLVLQNNYKWTCRLCLMVPPASPHIMPLGTHGVVR
MRDKMXLXLQFYXAMSQNNQIPFSFIIPVIYDIAVNQTSVVQKESISSGP
IVARAFQHTNQFSRSGQLNPQRCTILPIIHDLLMNFTLPNEGVMAGXPPP
MGPGMMGPMMQRHPSPMGELTPLTMKRYRFIDIGANLTDLMYEGFYNGSN
KHSPDLNTVIERSFTLGNLSKMILTAGNLEDSKKSLELAKKDDRMFSTIG
VHPTRCSELKESKDVEGYLNSFSNIVKQNTNKIVALGEFGLDKERTHFCD
FETQKKYFDMQLEHFGNNGCDLPLFLHSRNSSKELLEILNSHKSKFTKSG
VVHSFDGSLEEANSILDAGYYIGINGCSCKTEENIEVIKELPIDKLMIET
DCPWCEVRPSHAGHKYISTRFGDVPTVKKNNWKHGAIIKNRNEPMFIVQV
LEIVAGVKGLNPQEVADVIFETTDRVFFQS

mRNA from alignment at LSalAtl2s2069:97..7472-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000003800-699647 ID=EMLSAT00000003800-699647|Name=EMLSAT00000003800|organism=Lepeophtheirus salmonis|type=mRNA|length=7376bp|location=Sequence derived from alignment at LSalAtl2s2069:97..7472- (Lepeophtheirus salmonis)
ATGGTTCTTTCGATGGGAGGAGGAGCCGGGAGTGGGGGATTGGACGTGGT
GGCCCCTCAGCATCAGGGCGCTGGTGGTGGACAAGTGTCCCTAGGGATGT
TGACGGAGTTTATCGTTCAGCGGACGTACCATGAGCTAAGCATCTTGAGC
GAGCTCCTTCCTCGCAAGGAAGACATGGAGCGCAAGATCGAAATCTTCAA
CTTCGCCTCACGGACTCGCATGCTTTTCATCCGACTCCTCTCTCTCGTGA
AATGGGCCTCTTCGGCCTCCAAAGTAGACAAATGTGGATCTATCATCAAT
TACCTGGAGAGGCAGGSACGGRTCTTTWGSGAAACCGCGGACTCCMTGGC
CAAAATAGCACGYGACTCCCTTCCTCGTGCCMCTCTCCCCAACTTCAATC
TCCCTTCCGCAGTGGAAATCCTCACAACAGGCTCCTATTCACGTGTTCCA
AGGATCATACGCGACAAAATCGTGGCTCCAGAGCCCATCTCATGTATGGA
CAAGAAGAAAACCCTACTCAAACTGAATCAAGTCATTGAGCACCGTTTGG
TCACCTCCAATCTTCCTCTTCAAATGCGACATTTGCACATAGCGGACGGA
AGAGTCACCTTCATGGTGCACAATGAGTTCAAAGCCTCTCTCACCCTCAT
TGGGGAAGGGCCCAGCGTACCTTGGCGTCTATTAAATGTTCAAATTTTGG
TGGAAGACCGTGATACTGGGGAAGGGAAAGCACTCATGCACTCCATGCAA
GTCCGCTATGTCGAACATCTTATACAGACACGCTTAGCAGATCACGCTCC
TCTTCAAGATCTGTACAACACTCTTCATACNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCACTTCAACTTGTAAGTCTTATACTCTCAGTC
TACAAAGTTAATTAGAGAAAGACTGGGGAATTATATTCGAGTGGAAGAGT
ACAGGCTAGGKAAATGKCTGACAGTGTCCTACTGGCGGGGATGGATGRGK
AAGGATCCCGCCYCAGAGTTGGGCTATCGATTCTCTGTTCAAACGGATCC
AAATTATCCTGGAAGACCTCATATGGTAGTTCATAGTCCCGTCTTAACAA
AAGAAGAATCTGAGACAGCTGAAAAGGCAATGAAGTCGGATCATTTGTCA
TTAGAGCGATTATTGGTTCATAGTATTTATGTAAGGACCAAGTCGCGACT
ACGAGCTCTCAAAACAGATATTGAGAAACGATTGAAACTTAATGATGGGC
ATGCAAGTCTCCATGGATCTCCTGCTATTCTCTCAGTACCTATACTTCAG
CCATGTCTTCGATCCGAACAACTCATCATTGCAATAGATACACATAGTGG
GATTTTCTTAGTGCATGTCCCTGGCTATGAATCAAATCCCTATACTTCTG
AAATACAAAGAAATCTCAACGAAGACAAGTCAAAGTTAGAGCCTCTCATT
TCTCAACTAAGGATTTGGATTACTAAAAATCGTGTGCATAAAACGCTACA
ACAGTTMCCTGCAACATCCTATGAAACTCTTCCTATATTGTTTGATCAAG
ATAAACATCATCCATTAAAGGACCTATCTCCAAATAGAATGTATATTAGA
CTTAATCACCATTCCAACGCTATAATTATTATCGAGTTTAAAGAGAAGGA
ATTGAATCAATGTGAGATGGACTATAGGTACGTGCAATTTATCTATTAAA
AAAAACCACATAAAAACTAAATACAATTTTCATTTTCAGTTACTACTTTC
TCTGGGTCAAACCCTCGTCCATCGACGAGGATGATAGTAATCGAGAGTCA
AGCAATAAAATTGTCCCTAGTGTGTATTTCAAAGCCCTCTCCATGATCGA
GCTTGATTCCTTTCTGGTTACCCATGGTCCCGGAACAAAAGTTGATATTC
AAGATTTTTCAGAGACTATCCTTGGTAAACGAAAGATTCCTTCAAAATCT
GATACTCCTATCAAAAGGACAAAATATCCGGCCTACTTTATTTCTGACTT
GGCACATGTTGTCGCATTCGCCAATGAGAGAATTCCTTTTATTGGTATAA
TATCTGAGTGTGATAACTTAAATGTTTCTCACTCGGGCATTGAAGTTGAA
GAAAATGAAATCGGGGTTTTCATGACAATTATAGCCTTTCCTAGCGTATC
AGGCGTGAGTGATGATGAAGTCTCCCGCCTTAGAAAATATCTTCTTTCAA
CATCCATTCGTTTACAATCTCGACAAGGGAGATCATGGAAGGTGGAATTT
ATATTTATCGATAATCCAGTTACTTCAGTACAAGATAAAAATAGATATCC
CGTCTATTTCAACTACGATGTAACAATCCCTGAACAAACTGTTGTAAAGC
GCATTTTACACGAATGGGAACAAATGGTACACACCTATTTTTACTTAAAT
GCTCAACTTTTTGTAATCATATTACTTATTTTGCTTTCTAGGCTCATCTA
TACTCTGTGGTTGAAGATCTAGTAGACTTTTTGGATTCTAGTGAGTCTTC
TGAAAGCGCTAATATCAGGATCAAATCATACAATTTTAAGGAGTTAGTAC
TTGAGTATGGACCATATTTTAAATCTACTGTCAGAATCAAATGGAAAGCT
GAAGAATCCAAGTTTAGTCTAATATTTAGTGGTATTCACGAGTTTTCCAG
CACAAACCCTCATATTTTATTGAGAGAGCAATTGACACAGCATTTGAACG
AACACAGAGACCTTCCTTGGCTCGGTAAAATTCTACATGAAACGTAYCCG
CCGTTGCGTTCCATAGCTCGCCTACCCACGACACCTCAAATGGGAGTTAC
GCAACAGCGAATGAGTATTCAAACCTTTTCCATTATTCCTCAAGGACCCA
CTCATATCAAACTCGTATTTTACAACAGCTACTTTCTGGACATTCAAATT
AAACAAGGTGGAATCGTTTACATTCGAGATGGCGCTTTCAGTGTTTTTGA
TCAAAGAAAAGTTGTTGAAGGAGCTCAACCTATTCAGGGGCTCAAAACGT
TTTTAATGAAATATATAGATGAATCCGTGTTTCATCGACGACAATCTCAA
ACTGAAGATGATAATCCACCAAGTCCTATGTCCACAGATGATACCTCAAA
CAGTGGACTAAGATTTAACACCCCTCATACTCCACCCAGTAATCCTATGA
CTCCAGCGAGTCCCCATACTGTTGGATTTCTCCAAAGTCCTCCTTCATCA
ATTCGTAATCCATCTCCTGCAAGCCAACCCGTACCCAGTCCAGGAACAAG
TAGTGTTAGGTCTCCTTTAAATCATCCCATTGGGAGTCCTTTTCATTCAT
CCTCTGTTCCGTCCCCTCTTGCTGTGGGATCACCTGTTACGCAACGACCC
TCATCCAAGCCTGGGTACCATGGAAGTACTTTCACGAGTAGAGCTCTCCC
TCGACTTTTACCTCAGCGTCTTTGGGCTGGAGCTAATCCAACACCTTTAA
CTCTTAACGCTTTCGATGATATATGCAAGCCCTCAATTTTAATTCCGCCC
AATGGATCTGGTAACTCACCCTTTGTTCCCACAAATATGTCAAATATCTC
ACCTCTTTACCGTTTTCTTGGCTGTGTGTATTTAAAACGTTATCTCCTCA
ATTGTATTAAGGTCGAAGATTTTTTGACTCTCCTACCCACAAACGAAGTA
GGGATTATATCTTTTAAAGTTGAAAAGCTTAATTGTAGAGTTGCATCCTG
GCCTGGCAATTCTTTTCAATCTCTCCACTTGAAGGTGAGTTAGCGCTTTC
CTGCGTCGCTTCCACTATTAATAGTATCATACTATACTGAATGTGTTGAA
TTTATTAAAATTATTTTTTAGGTTCAACCTGAGGATGGAAACCAATGGCC
TCCAGAAATGCTTCTTTTATTAGAAAGGTTTTTCGACACCAAAGTAGCAG
CTCCCCCATATCGTCTCATCATGATGTCTTCATTCATTTCGATTCTTAGA
TGTCCAACTGAAGTACTTAGAGATATGATTCAAGTAATGAAATTTGATCT
CATGCCTGATCTGGTTCTCCAAAATAACTATAAATGGACTTGTAGACTCT
GCCTCATGGTACCTCCAGCATCACCTCATATAATGCCGTTAGGTACACAC
GGTGTCGTACGAATGAGGGATAAGATGYTWTTGTMCCTCCAATTTTATSG
AGCCATGTCTCAAAACAACCAAATACCTTTTTCATTTATAATTCCCGTCA
TTTACGACATTGCTGTGAATCAAACCTCAGTCGTTCAGAAAGAGTCCATC
AGCTCAGGGCCCATCGTTGCTCGAGCATTCCAGCATACTAATCAGTTCAG
TCGATCAGGACAATTAAATCCTCAACGGTGTACCATTCTACCGATCATTC
ATGATCTTCTTATGAACTTTACTCTACCGAATGAAGGCGTTATGGCCGGA
GRMCCACCACCCATGGGACCTGGGATGATGGGACCAATGATGCAACGACA
TCCATCTCCTATGGGTGGTCAGCATTCTCCTTATATGGGACAACAGCAGC
AACAGCAGCAATGACCTNNNGATGTTGTCACTATTAAATATTTGTTAACT
TACCTTTTTAAACTTATTATTGAGTATATATATATATTCACTACTTATGA
AAACGTCGTTAAGTCTCACATATTTCTTATTTTTATTTATTCTGGATTAC
TCCTTAAGATAAATGATGATTGTGCCACTTTCCAACCTTCCTCCCCTCTC
TTTACCTTATTTCTCTCTTCCATCATTGAATTAAATATTTTAGTATGATG
ATAACTTATTAATGTGAAACATTTAATATTATAAATAAAAATAAAAATAC
TACTCGAATGTTCAACAAAATCTAATGAATCATTAACGAATCAGATTGCA
ATCCAAATTTGACATCCTTATTTGTTTTTATAGGTAGAGCTGACTCCTTT
AACCATGAAACGCTATAGATTTATAGGTAAATATTCACAGACATGATTGT
AGTATCTTCATATTAATTATCCGTGATATTAATGTATCTTTTCTATTGTT
TCAAAATTAGACATTGGAGCTAATTTGACAGATTTGATGTATGAGGGCTT
CTATAACGGATCCAATAAACACAGTCCTGATTTGAACACCGTAATAGAAC
GCTCCTTCACCCTTGGTAACCTGAGTAAAATGATACTGACTGCTGGAAAT
TTGGAGGATAGCAAAAAGTCCTTGGAATTAGCCAAGAAAGACGGTTCGTT
TTCATTGAAAAAATAATTTTATTCGTTGCGATTATAATTCTTAAAGCATT
GCCTTCTTAAGGGTCTTAACACGTGAAGTAAAAATAAGTTCATTGTTTTA
TATCGAAGTTAAAGACTTTATTTGTCAAATGTGCGCAGTTTTCTACGATA
ACTTGTGGGCAGTTTAAAAGTAGTTTCATTATTTATCTTTTATAAATAAA
AAATCCCCGTCCATAGTGTTGTGTCAGTCCTAATTGATTCGGTCCAGTCT
TAGGACCTCTGTTATCAGTCCTTGGACCGTCGGAGTTTCAGTACTAGAAC
TGCTTAGAAAAGAATAGAAATAACGTAATCAAGGATCAAAGTTTTAGGAC
TGATATGCAATACTAAACTGGACCGGACCGAGACTGAGATGAACCTGACT
ACAGTTATCAATCCTAAATTAGGATCGAAACAACATTACGTGTCCCTAAT
TACTAAAGACAGGAACAGTCGATTTGCACAAGTTTATATTGAGGAATCTT
AATTTTTCACCCGCAAAATCATTCGACTTAAACAGAAGCAGACACTAATC
ACTTGGTGCTAGGTGCAAACTATAAAGGGGATGGATAAGAACCTCTCCGA
GCTTTTGACGAATCATTATAGATGTGTGTTGKCTGCCACTGTTCTGATGG
AATACAATTCCCCCTCTATTGGGCAAACCTGACTGCTTCTGAGAGATTCA
TCCTTTAAAACGGTCTGATTGCAGACAATAAAGTTCAAATTATCATCTCT
CCCTCTTTATGATAAAACATTTATCGATGCAATTTTTTTTTTACTTAGCC
CCAGCATAATAATAGGATTTTCGAAAAAAATTACAAAACCTATCTTTTTT
TTTTCTTCATAGAAGTAGCATGTTCTAAAAAATTTTTATTGCATAATATT
TTGTAATTAGATACAATTATGATGTTTTGTCTGATGTTATGAAAAAAGAA
AGCAAAAAAACTTCTCCAATCGATTTCTCATAACAACTTATAAAAGAAGT
ATTAGTAAAATTATCTTTAAAATGTGAACAAGTATCGACAAAAACGGTGG
AGATTATAATTAAATGGGATAGTTTTAACTATTCTATTTTATTTCGAAGG
ATCATGTGTGGACTTATTTTACTGACTTATTTATTATATTCTTTGAAAAC
TTTCAAATAACCTTCTAAGACATAAATATACTTTTAATTTTCAGATCGAA
TGTTTAGTACGATAGGCGTTCATCCCACTCGTTGTTCCGAATTAAAAGAA
TCAAAGGATGTTGAGGGATATTTAAATTCATTCAGCAATATTGTCAAACA
AAATACAAATAAAATTGTTGCCCTCGGGGAATTTGGTCTCGATAAGGAAC
GAACGCATTTTTGTGATTTTGAAACTCAGAAAAAGTTTGTTCATAAATGA
TAACATTTATATGTATTTCCTTTGAATTCATTTCCAATCATAGATATTTT
GATATGCAATTGGAGCACTTTGGAAACAATGGATGTGACTTACCCCTATT
TTTGCATTCCCGAAATTCGTCCAAGGAGCTACTTGAGATTTTAAACAGTC
ACAAATCTAAATTTACAAAGTCGGGTGTGGTTCATAGTTTTGATGGATCA
TTGGAGGAGGCAAATTCCATTTTGGATGCGGGGTATTACATTGGGATCAA
CGGATGTTCCTGTAAAACGGAGGAAAATATTGAAGTGATTAAAGAACTAC
CCATTGATAAGCTCATGATAGAGACAGACTGTCCATGGTGTGAGGTTAGA
CCCTCACATGCTGGTCATAAATACATATCCACTCGCTTTGGGGACGTCCC
TACTGTTAAGAAAAATAACTGGAAGCATGGAGCAATTATCAAAAATAGAA
ATGAGCCCATGTTTATTGTGTAAGTACTGATGTGTCATTAGTATTAAGTC
TTATCTATTTTTTTTTTCTCAATTAGGCAAGTTCTAGAAATTGTAGCTGG
AGTGAAGGGACTGAATCCTCAAGAAGTTGCTGATGTCATATTTGAAACTA
CCGATCGGGTCTTCTTTCAGTCGTGA

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