EMLSAT00000004662, EMLSAT00000004662-700509 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004662
Unique NameEMLSAT00000004662-700509
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: female reproduction, survival
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
L F102 UN21_g1627 female
  1. PreAdult
  2. Adult
 One animal sectioned
female reproduction, survival 		26.04.2013 - 09:57
10.06.2013 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s242supercontigLSalAtl2s242:809507..810193 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004662 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004662EMLSAG00000004662-687428Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020357EMLSAE00000020357-729285Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779792auto779792Lepeophtheirus salmonispolypeptide
EMLSAP00000004662EMLSAP00000004662Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004662

>EMLSAP00000004662 ID=EMLSAP00000004662|Name=EMLSAP00000004662|organism=Lepeophtheirus salmonis|type=polypeptide|length=228bp
MFILVYLVFFVFLEVSIAQYATHIDITFNSSDIKLNSSSQSFFKYQPNLK
LKNVSIESAFLSGIWLMYEDMNYNQGNPGGKVVYGWGYNHSIHYNIDISK
ISSMRYSGTESGLQFDTLNFYKEPGFIGNEEMYYQDEAILTRPFFGKSII
LTGCKPWTLFNETHFHGEHICIYPRSISSNNCTPGFFEAPRDFGDFVDKV
RSIRLGCFSGITFKGLDLAINTTRYFNY
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mRNA from alignment at LSalAtl2s242:809507..810193+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004662-700509 ID=EMLSAT00000004662-700509|Name=EMLSAT00000004662|organism=Lepeophtheirus salmonis|type=mRNA|length=687bp|location=Sequence derived from alignment at LSalAtl2s242:809507..810193+ (Lepeophtheirus salmonis)
ATGTTCATACTAGTATATCTAGTCTTTTTCGTTTTCTTAGAAGTCTCTAT
TGCTCAATATGCAACTCATATTGATATAACATTTAACTCCTCTGATATCA
AACTAAACTCATCTTCTCAATCTTTTTTCAAATATCAGCCCAATTTGAAA
TTGAAAAATGTGTCTATTGAGTCCGCTTTTTTATCTGGAATATGGCTTAT
GTACGAAGACATGAACTACAATCAAGGAAATCCAGGAGGMAAAGTAGTTT
ACGGATGGGGATATAATCATAGCATTCATTATAATATTGACATAAGCAAG
ATTTCCTCTATGCGCTACAGTGGAACAGAATCTGGATTACAATTTGATAC
TTTGAACTTTTACAAAGAGCCAGGATTCATAGGAAACGAGGAGATGTACT
ATCAAGACGAAGCAATATTGACTCGACCCTTCTTTGGAAAATCCATTATT
CTGACAGGATGCAAACCGTGGACTTTATTTAATGAAACTCATTTTCATGG
TGAACATATTTGTATCTATCCAAGATCTATATCATCAAATAATTGTACTC
CTGGTTTTTTTGAAGCTCCAAGGGATTTTGGTGACTTTGTAGATAAGGTG
AGGAGCATTCGGCTTGGATGTTTTAGTGGTATTACCTTCAAAGGACTGGA
TTTGGCAATTAATACGACTAGATATTTCAACTATTAA
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