EMLSAT00000005394, EMLSAT00000005394-701241 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005394
Unique NameEMLSAT00000005394-701241
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
disembodied dib both
  1. Nauplius1
non
-Missing-
24.07.2015 - 13:08
30.07.2015 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s290supercontigLSalAtl2s290:1069728..1071450 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005394 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005394EMLSAG00000005394-688160Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023542EMLSAE00000023542-732470Lepeophtheirus salmonisexon
EMLSAE00000023543EMLSAE00000023543-732471Lepeophtheirus salmonisexon
EMLSAE00000023544EMLSAE00000023544-732472Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780357auto780357Lepeophtheirus salmonispolypeptide
EMLSAP00000005394EMLSAP00000005394Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005394

>EMLSAP00000005394 ID=EMLSAP00000005394|Name=EMLSAP00000005394|organism=Lepeophtheirus salmonis|type=polypeptide|length=115bp
MRQAGVPLILKNFDYGLSVFINNQNTEDIQKDTLSLSKENTCLTPDKLAR
LIALSAGLPRQILFTAEKAGLLCHDDSVDGFKMIGSWLSNHNSMSSAAIR
FLVVVVYAESEVAYY
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mRNA from alignment at LSalAtl2s290:1069728..1071450-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005394-701241 ID=EMLSAT00000005394-701241|Name=EMLSAT00000005394|organism=Lepeophtheirus salmonis|type=mRNA|length=1723bp|location=Sequence derived from alignment at LSalAtl2s290:1069728..1071450- (Lepeophtheirus salmonis)
ATGAGGCAGGCAGGAGTACCTTTGATTTTAAAGAATTTTGATTACGGACT CTCTGTATTTATCAATAATCAAAATACTGAGGATATTCAAAAAGATACTC TTAGTTTAAGTAAAGAAAATACATGTTTGACACCAGATAAATTAGCAAGG TTGATCGCTCTTTCAGCTGGCTTACCTAGGCAGATACTTTTTACAGCTGA AAAGGCTGGATTACTTTGTCACGATGACTCTGTAGATGGTTTGTAATTTT AGCCAAATAGATTTTGATTCGAGGGTTAGTTAAGTAAAAAAGTTTCAACC AATTTGTGATTTGTATTTTATTTTATAATTTCTACTCTCGTGGGTCAGAA TCCCGAGCCAAAAAGGAGAGAGAGGAATAGATTAGCGATTAGCTACGGTA AATATGACCGGGTCTCCCCTTAAGGACTTAAGGGTTTAATCATGATATTT GTAGATTTTACTAGAATAAAGCCAGTCTGTTTTACGAATCTAAGGGAGTA AGAGTTCTTATTGAAACTGTCAAATACATTATACATCACAAACTCCACCT TAGAAATGGAATTATGATTGAGATAAGTTATATACATCAAGGAAAGTGAA GTATTCTTATCAATGACATATTTTTCTTAGAGAAAGAGACGAAGCAGAGT TGACTTAAGAAGAAAATGGCTTCATAATTTCAATGAAGGAACAGTGGATG GGMGATGAGAACTCTTCCTGTTCCTCGCTTGGGCTTTAAGTCCATTATTC TGTTGTTCTTTTTTTATCTCATTAGTTCTTATAGCAGTATACAATTATTC GTAGAAGATTTGGAGTAATTTCGTATTTTTGAGTATTGAGGCAATGATTC ACAAGGTCAGAAGTAACTATCCCTTGAAACAGAACATGAAGAGAGGATCA AAAATCGTGTGGCTAGGATATCCAAATGGACAAATATGAACTCCAAGGTA ATATGAATAGAATCATCCAATTAATTACAATCCAGGCGGAGGAGGTAATT TTTAAGGCATTTGAATGATAAGATTAATTATATTCAATATTGCACTAAGG TAAGCGGCAAACCATAGTCTTTGTTAGAGGGAGATGTTATCACAACAATT TTGAATGATTAAGAAAGAAGAAAGTTGACACGGAACAACCATTTTCCTTT TGTAATCTCAAAACAGTAATTTATTTCACCAAACGTGCCCAGTATTACTA AATAATAAGTAATAACTAATAAGATCCATTATAGAGCAAATTAAAAAGAA ATGAATACATAATATGAGCCCTGAAGAAATAGGTAAAGGTTTCGTGTTTT CAAATTATAAACTTGCGTTTCGCAAAAACATTCTTTATTTTTGCAATTAA TATAATATGACAATTGAAAATATTCATGATCTTATCACTACACAGAATAT TTTGATCCAATTAACTAATTTTGAACATACCTATATTTAATTGAATTCAA TTTTGCCCATAATATATATATTAATTCTGTATTTACTATGAAGTATTATG AATTAGATAACAATATTTTTTTATTTTTTGTAAACTAAGCAAAATGATTG GATCCTGGCTAAGTAATCATAACTCAATGAGCAGTGCAGCTATTCGATTT CTAGTTGTAGTCGGTACGACCACCTAGCTCTGGACTCTTAACAAGTAATT TATTATTAATCTGAGTCAAATCTTAAGTATTTTTTTAACAGTTTATGCCG AATCTGAAGTTGCATATTATTGA
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