EMLSAT00000005587, EMLSAT00000005587-701434 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005587
Unique NameEMLSAT00000005587-701434
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:2096601..2098047 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005587 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005587EMLSAG00000005587-688353Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024431EMLSAE00000024431-733359Lepeophtheirus salmonisexon
EMLSAE00000024432EMLSAE00000024432-733360Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780948auto780948Lepeophtheirus salmonispolypeptide
EMLSAP00000005587EMLSAP00000005587Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005587

>EMLSAP00000005587 ID=EMLSAP00000005587|Name=EMLSAP00000005587|organism=Lepeophtheirus salmonis|type=polypeptide|length=176bp
MVEFNIRFFRSKPVSEIPLESVTLLESQAKSEEVIDSIASSSWRENDNMA
HHRTYIISKKGDEDIPLDGNLIPIIRGILDFDGKFDPEHRSSDAEDDVDE
SSTGDGASHQNGTNKRKYVDIYDLGFRRASLNESNFYSTSSASFVRDRFS
SSSSLSNTKKRSLSPYGLKYDVFQCN
back to top

mRNA from alignment at LSalAtl2s2:2096601..2098047+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005587-701434 ID=EMLSAT00000005587-701434|Name=EMLSAT00000005587|organism=Lepeophtheirus salmonis|type=mRNA|length=1447bp|location=Sequence derived from alignment at LSalAtl2s2:2096601..2098047+ (Lepeophtheirus salmonis)
ATGGCTCCAACAACTTCTCGAAACAAAGTTAAGAATGAAGATAACATCAT
GGGAAGGATATTAGTGAAAAAGGACAAATTAGTAGTTTTGTGTCGGAAAA
TATCCTTTAAAACTGTGATTGGACACCACAAAACGTATCAAGTAGAAGAT
ATCTACAAAAGGGAGTCACTTCGATGCCGAATCATGTCTCCTGAAAATAA
GAGCCCCTCCGCTTGTACATCTAAGGATGTCCTAATTCGAATAAAACAGA
GAATTGGTTCAGCCAAAAGAAAAACAAGATCTGATTTGTGGACTCCAGCT
AATGGTGGAATTCAATATTCGGTTTTTCCGAAGCAAAGTAAAATTGTAAG
TTTATATCCTATTCCATGAATTCATAGTGGAGAAGGTATCCCAGATATAT
TTTTGACAAGTTGTTATTTTAACCTTTATCACTGGGATTCCTATTTTTTT
TATTTATGAATAATTCGAAATGAAGATTCTATTACCCATTCCACGAGTGT
TTTTTTGATCTTTTTTATCCTCTGACAAGAAAAAGTAAATTATCAAACGA
AGAAATTTGATACTAATTTATAATCATATTGTATCGTGAATTGTGTGGGA
GAATCTAGTTTCAAATGTCGAGTACCTTTATTTCATTATTTGAAAATATA
TCTCTTAATCAGCCTGTTTCAGAAATACCATTAGAGTCCGTAACTCTCTT
AGAGAGTCAAGCAAAGTCGGAAGAAGTTATCGATAGCATCGCTTCATCAT
CATGGAGGGAAAATGACAACATGGCTCACCACAGGACCTACATTATTTCG
AAGAAAGGTGACGAGGACATACCCTTGGATGGTAATTTAATTCCTATCAT
TCGCGGTATTTTGGATTTTGATGGGAAATTCGATCCAGAACATCGGAGCT
CTGATGCTGAAGATGATGTCGACGAGAGCTCTACTGGAGATGGTGCTTCG
CACCAAAATGGAACAAATAAGAGAAAATATGTAGATATATATGACTTGGG
ATTCCGAAGAGCGAGTTTAAATGAGAGTAACTTTTACTCAACTTCATCCG
CTTCTTTTGTTCGAGATAGATTCTCATCGAGTTCTTCTCTCTCGAATACT
AAAAAGAGATCCTTAAGTCCTTATGGGTTAAAATATGACGTCTTTCAATG
CAATTAGATTAGATATTAATATTTATATACTCTATTATTGTCTATAGTCT
TCAAAGATTTCGTTCTGAATTGTTTATGCGCCTATCATAAGAAACCCAAC
AAAAAAATTGCAATATTAATGAATATTTATATAAATATATAATATAATAT
AATGATACTATATATTCCATCAAATATATTATATAATATGTCTGGCATTA
TGATCAAAATGACTTATCTATCATAGGGATATTTTTTTCCGCGTAGGATT
TCAGAAATATGCAAAGAGTAGGTTACCTTAGAAATGTTTTAAATTGG
back to top
Add to Basket