EMLSAT00000005667, EMLSAT00000005667-701514 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005667
Unique Name	EMLSAT00000005667-701514
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s307	supercontig	LSalAtl2s307:216793..221090 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005667 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005667	EMLSAG00000005667-688433	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000024789	EMLSAE00000024789-733717	Lepeophtheirus salmonis	exon
EMLSAE00000024790	EMLSAE00000024790-733718	Lepeophtheirus salmonis	exon
EMLSAE00000024791	EMLSAE00000024791-733719	Lepeophtheirus salmonis	exon
EMLSAE00000024792	EMLSAE00000024792-733720	Lepeophtheirus salmonis	exon
EMLSAE00000024793	EMLSAE00000024793-733721	Lepeophtheirus salmonis	exon
EMLSAE00000024794	EMLSAE00000024794-733722	Lepeophtheirus salmonis	exon
EMLSAE00000024795	EMLSAE00000024795-733723	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774694	auto774694	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005667	EMLSAP00000005667	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s307:216793..221090-

protein sequence of EMLSAP00000005667

>EMLSAP00000005667 ID=EMLSAP00000005667|Name=EMLSAP00000005667|organism=Lepeophtheirus salmonis|type=polypeptide|length=467bp
MEGIKNQKVNIFSPIFNSTLNSTDGFNMTSNYSYLTTTPEGILTSYEPEA
ICNLQEFYKGYREIHGWLSLCVCIFGTIANILNIVVLTRKEMNGSPINLI
LTGIAIADMLVMIEYIPFTLHRNLLTGRSKEAEYSWGFSLFVWSHSNFSL
VIHAVSIWLTLSLAVWRFIMIRFHTLSPIYCTLQRCKVMLFLAYIIPVFL
CIPNYIATTINKKTNQGKIIYVLDWSEIATAHNKLLYRINIWLYTFLLKL
IPCIVLTIITGWLIKVLYKAEERSARLKNRVQLSANNNSTKVTISNGSRR
VAGSIXSRKRSTDRTTRLLVVILILFLLTEFPQGILGMLSAIYGDQFFKD
CYLPLGDVMDAMALTNSAINFILYCVMSKQFRKTFVQTFSCKSISSPGRQ
TNLIVNKCGNDSTTVRIRGNTIPSQRRSALNLKSSNFPEEIPMIITRGFE
NSTIKDDRIIKEEEENT

mRNA from alignment at LSalAtl2s307:216793..221090-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005667-701514 ID=EMLSAT00000005667-701514|Name=EMLSAT00000005667|organism=Lepeophtheirus salmonis|type=mRNA|length=4298bp|location=Sequence derived from alignment at LSalAtl2s307:216793..221090- (Lepeophtheirus salmonis)
ATGGAGGGAATTAAAAATCAAAAAGTTAGTAATTATCATTGCAATTTGGA
TTTATTGTTAAAAATGATTTAACTTTATTATTCATAAATTATTTCCCGTT
TATATTATTATTTTACTATATTTAAGACATATTCAGTCCAGTAAATCAGT
CATTTTTCTGAGTTTTTATTATTAAATCTTAAAGTAAGTTTTTTTCTCCA
GTCTCACCCAACCGAGAAGTTATATATTTGATGTTTGTGAATATGAAAGA
GCGTTATAAGCACTGAGTGGCCATGATAAAAATAGTGTACATTGACAGTG
AAAAAGAGTTATTAATGATATGTTCTATTAAATAAATTTTGAAAACATAT
CTGTAAATTTTACTAATTTTCTTGTTAGCTACATATTTCGGAATTAATGT
GAAATAAAATTGAATGTTGCTTTTATATGTACATATCGTAAATAATATCA
TATTATTAATTATTGTTGCTATNGGAAAATGAACGACGTGTTTTATCCAA
CTGTTAAAACAATATTTAAAGCAGCTATCATTGCACAAAACAAAGATGAA
ATCGGGGAAATCGTTTACAACTCGACGGATCAAGTAAGAATATGTGAGCT
AGGTACTTCTTCCTGAAACTATTTTGCCTGAGAACAATTTAGCATAAGCC
ATTTTGACTCAAGCATATTTCGCCTGAGTATATATATATAGAAAATGAGG
TTTATATTTCGTTATTGTTGATTTTTGTCAAAATTAATGTTTTATTTGTA
TTTTTAAATACAAAAATTTAATGTTTATTACTATAAAATTGATCAAATGT
TTGTATTTTTTTGAAAAAAGATGGAATTATGCCCTAAAAATTCTACGCAG
ATACAAACAAAATCTCACTATATAAGGAATTTGAACCAGAGACAAAATAA
TTAATAATAATAAAATTAAACAAACATAGCAACGATTCCAATAGAAGAAG
TGATTAATTTTCATTAGACAGGATGAATTATTCATTGTAGGAAGGACTCA
TGGATTGCCGATGTGAGCCAAGAGCATAATTTCATCATTATTCCAAAAGA
AAACAAAGATTTAATGCATTTTATAGAAATAAACATTACATTTTTTAATT
CAAAGGAAACATCAATTTCGACCAAAAATAAACAATAAACTACATTTATT
TATATATTAAGGCGAAATATTCTTGATGCAAATTGTCCCAAGGCGAATTT
GTTTATGGCGAAACGTCTTCAAGCAAAATAGTTTTTAAAAAAAAGTACCG
GGCATCATGAATACCATACCTTGTAGACGTCATTCAAATATGAGAGACAC
TAATATTTGAAAGCATTCCATTAGTTATATTAATTATTTTTTCTTCTTTT
TAGATATTTAACTCTACACTAAATAGCACAGATGGTTTTAATATGACGTC
CAACTATTCTTATCTAACAACAACGCCTGAAGGCATATTGACATCCTACG
AACCTGAAGCCATATGTAACTTGCAAGAATTTTATAAAGGCTATCGTGAA
ATCCATGGTTGGCTAAGTTTATGCGTTTGTATCTTTGGAACAATAGCAAA
CATACTCAACATTGTTGTTTTGACACGCAAGGAAATGAATGGATCTCCCA
TAAATCTAATACTGACAGGTTCGTTATCTATTTTTCTTTTCCAAGATTTA
TAGCTTCAAATGACTTGAAAGATGAGTCTTCAAATGTAAAATCACAATTC
ATGTATATTTGAGAAATATGAAGAAGAAATACTACATACATTTGTATTTA
ACTTCTAGGGATAGCAATTGCGGATATGCTCGTTATGATTGAGTACATTC
CTTTTACACTTCATCGAAACCTTCTTACGGGAAGATCTAAAGAAGCAGAG
TATTCCTGGGGATTCAGTCTTTTTGTGTGGTCTCATAGTAACTTCAGTCT
AGTAATTCATGCAGTCTCAATTTGGCTTACCCTCTCCCTTGCAGTATGGA
GATTCATAATGATACGCTTCCATACACTTAGTCCAATTTATTGTACGTTG
CAGCGTTGCAAGGTCATGCTATTTCTAGCATATAGTAAGTTATATAGTTC
CCATAAATAATCAAAATCGATTGTATTCTAAATATAGTAAATAAAATATA
TTTTAATTCTATACTTAACTCAACTCCACCCTTATTTAAACTACTTATTT
GATAAATCAGTATGTTCTTTGGCTACCTATATACAAATAGTGAACATGAA
AACCAAATTAGCAAAATATTAATCAAAGTGTAAATTTTTGTAAGATAAAT
TCAAGCTATTTTGATTATTTGAGCCATAATAATTTCAATATATAAATTTT
TAATTATTATATTTTTAATAGTCATCCCAGTGTTTCTTTGTATTCCAAAC
TACATTGCAACAACTATCAACAAAAAAACGAATCAGGGAAAGATCATTTA
TGTTCTTGATTGGAGCGAAATTGCCACAGCACATAATAAACTCCTTTATC
GAATCAACATTTGGCTCTACACGTTCCTTCTTAAGCTCATTCCCTGTATC
GTACTTACAATAATCACTGGATGGCTCATTAAGGTCCTTTACAAAGCAGA
GGAACGTTCAGCTAGACTAAAGAACAGAGTTCAACTCAGTGCTAATAATA
ACAGCACAAAAGTAACTATTTCAAATGGAAGTCGGAGAGTGGCAGGTTCA
ATTAAMTCACGAAAAAGAAGTACGGATCGAACTACACGGCTCCTGGTAGT
AATTTTGATTTTGTTTCTTCTAACAGAGTTTCCACAGGTTTGACAAATTT
TGATCTCTCTTGATTGATGTACAACATAGTTAGATATTTTAATGAGATAT
ATTTCTTACAGGGAATCCTTGGGATGCTCTCAGCAATTTATGGTGACCAA
TTTTTCAAGGACTGCTACCTTCCATTGGGAGATGTAATGGATGCAATGGC
TCTTACAAATTCCGCCATCAATTTCATTCTTTACTGTGTTATGTCCAAAC
AGTTTAGAAAGACATTTGTTCAAACATTTAGTTGCAAGTCCATCTCCTCA
CCAGGAAGACAAACTAATCTAATAGTAAACAAATGTGGTAATGATTCAAC
CACAGTCAGAATAAGAGGAAATACTATTCCATCGCAGAGACGTTCTGCTC
TCAACTTAAAGTCATCAAATTTCCCTGAAGAGATCCCCATGATTATAACA
AGGGGCTTTGAAAATTCAACCATTAAAGATGATCGCATAATAAAAGAGGA
GGAAGAAGTCGACAAACGCGATGGGGATTAATGTGCACAAAAAAAAAAAA
AAAAGCTACGCGCATAATGGGTTTTTCGTTGAAAGTGCTTCATTTTTTTA
TAAATAAAACATAAACAATTAAAAATTTTGAAAAATTTATTTTTTCAGTA
CAATTTATAAATATATACCTGTATGTATAAAAATCAATTTCTGTAGTGTG
GCCACCACGAGCACGTTTACAGAAGTAAAATTGCTGAACCCAATTTTTAC
TACTTTTTCCAGTAAATGGACCAATGACTTAACGTGTCCTAAAGCAAATA
ATCTAAAAATGCTAAATTGCAAAATTTAGGTGGACAATCAACTGGTCTAT
TTCTCGAATTATCGCACATTGTAATTTTGCTTTAATCGATAAAATAATAT
CGATTGTAACGTTTTCTGTCGGACAAGTGGTACTGTCTTGTTAAAACCAA
ATGTTTGCCATGCCCATTCCTTGCAATGGGGACCCAAAAAAAAATCAATT
ACCATGGTACGATAGCGATTTTCATTTACAGTAACGTGGCAATTATCACC
ATCAATGATCCCTCCAGCATGAAGTCCACAACTAACAGTAACTTTTTCGC
GATGCAATGATGTATCGAGAAGCACTTGTGGATTCTTGCATAACCAATAA
CGCATATTTTGCTTATTAATAAAGCCATTCAGCCAAAAATAAGATTCATT
ATTGAAGATAATGTTCTGATCGGAAAAACATTTGAAGCGGCCGTAATGAA
AAACCGATTATGTCAATGTTGATCTTTTTCTCCTTATCACATGTATAATG
ATTTTTGTGAACAAATATCAACTATGTAAAAACATTCAGTAATGTATGTG
TGCGTAAAAAAAACTTAAGTTTTTTCTTTGGGGTCTCTCGGTCATACGTA
AAAAAACATGGTATTTTTTTACTTTCTATATTTAAGGACAATATTTAGTA
TGCTACACTCTTACGGACAAATTAAAGAGACAATAAAGTATTTGCAAGTA
AAAGTTTTGTTTTGTTGAATCACTCCAAACTCAGTGTCGAAATCAAATTA
TCCGTAAATAATGTTTTTCTTTCAAATTTTTATAAAAAGAATACGTAG

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