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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s309 | supercontig | LSalAtl2s309:682709..688189 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005721 >EMLSAP00000005721 ID=EMLSAP00000005721|Name=EMLSAP00000005721|organism=Lepeophtheirus salmonis|type=polypeptide|length=510bp
MSILVSILAIGILLLCTYKSYXAIRINLMGPWSNAPPGPSTYPFLGAIPS
LVKDFWGSDRALKSPIDFFDKLHDIYGEDFRLHNGIEDTIILSSLNGIRE
FSNHPNASFRPFNKVLMDIYSDGKDLGMGLGTGGERWKFLRRFSSSAFKS
LSGGASGLNQNFDLEVSEIVAXLRGKAKSPDPIIRNVNIYFDIPILNIIW
WLVAGRRYKYGDPAIQKQFDYLKVLLEEPFIAPLTIIPFALYIPPLRKIY
NRIRNAMNSFRILLSKIVEERRKDNFTDEKRGFIDLFLKAQLDDKDNPYL
SNEDLIMCCQDFFLAGAETSSKTLCTFILYMVLYPNIQENAASEIRDAIQ
KDTQIKSKDRHLLPYTDAVLMEVRRYATPFPITPFRCSNKDIRVNGFDXP
ANVPVQVNLNGVLRSKYCWKAPDIFNPSRFLNEKGAVEIPNAFMPFGFGR
RRCIGEDIGNISNFLIVSNLLHNFKFSASFSKNKNHLPSNDRFGGIIQGY
EPFDVKIELR back to topmRNA from alignment at LSalAtl2s309:682709..688189+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005721-701568 ID=EMLSAT00000005721-701568|Name=EMLSAT00000005721|organism=Lepeophtheirus salmonis|type=mRNA|length=5481bp|location=Sequence derived from alignment at LSalAtl2s309:682709..688189+ (Lepeophtheirus salmonis)
ATGAGTATCCTAGTAAGCATATTAGCAATTGGAATCCTTCTCCTCTGTAC
TTATAAATCTTATSGAGCCATACGTATTAACTTAATGGGTCCATGGTCAA
ATGCACCTCCAGGTAAGGTGCCTCCCAACTAATAACACTGATATTTTAGT
ATCATGATAAAAATGCAGGMCCTTCCACATATCCCTTTTTGGGAGCCATT
CCTTCCTTGGTAAAGGACTTCTGGGGATCTGATCGTGCTCTAAAATCTCC
AATTGATTTCTTTGATAAACTACATGACATATATGGAGAGGATTTTCGAT
TACACAACGGAATTGAAGATACCATTATTTTATCAAGTACATTGAGTGTC
TTCATTGACAATGAGCTAATAGTTTCAATTAATTAAATTGCTGTAGGTCT
CAATGGTATACGAGAGTTCTCGAATCATCCAAATGCATCCTTCCGGCCAT
TTAATAAGGTTTTAATGGACATTTATTCTGACGGAAAGGATCTAGGTATG
GGTTTAGGAACAGGGGGAGAGAGATGGAAGTTTCTTCGTCGTTTTTCGTC
TAGTGCATTTAAGAGCTTAAGTGGAGGAGCTTCAGGTTTGAATCAAAATT
TCGATTTGGAAGTGAGTGAAATAGTGGCTGRTCTAAGAGGAAAAGCAAAG
TCGCCAGACCCTATTATTAGGAATGTTAATATATATTTTGATATTCCGAT
CTTGAACATAATTTGGTGGCTTGTAGCAGGGAGAAGATACAAATATGGGG
ATCCTGCCATACAGAAGCAATTTGACTATTTGAAGGTACTACTTGAGGAA
CCTTTCATTGCCCCTCTCACAATCATCCCTTTCGCTCTATACATCCCCCC
GCTCAGGAAAATATATAACAGAATTAGAAATGCAATGAATAGTTTCAGAA
TCCTTTTGAGCAAAATTGTTGAGGAGCGTAGGTATGCATATGGGACTCTC
CCTCCTTAGAGTGATTTAGAGGATTAATGATCATTAATGAATATCTCTTC
AACCTAGGAAAGATAATTTCACGGATGAAAAAAGAGGATTCATTGACTTG
TTCCTAAAGGCTCAGCTTGACGACAAAGATAACCCTTATTTAAGTAATGA
GGATCTTATCATGTGCTGTCAAGACTTTTTCTTAGCTGGAGCCGAAACAT
CAAGCAAGACACTGTGCACCTTTATTCTATATATGGTACTTTACCCCAAT
ATTCAAGAAAATGCAGCATCAGAAATTCGAGATGCAATCCAAAAGGTAAT
TAACCTTAGAATAACTTTAATTTTTTTGACATCTAGATTATACAATATTT
TAGGACACTCAGATAAAATCAAAAGATAGGCATCTGTTACCCTACACGGA
TGCAGTTCTGATGGAGGTTCGACGCTATGCCACACCGTTCCCAATTACAC
CATTCAGATGCTCAAATAAGTAATATATTGTAATGTATGAACGTTAAGTG
CATCCCATTACCTAATTTTAGAGATATCAGAGTGAATGGATTCGACAYCC
CAGCCAATGTACCAGTACAAGTCAATCTCAACGGAGTACTGCGAAGTATG
AGTAGACTATATTGAGATCCCTTAATTATATACTCTTACATTAGGCAAAT
ATTGCTGGAAAGCGCCTGATATATTTAATCCAAGTCGATTCCTAAATGAA
AAAGGAGCAGTGGAAATACCCAATGCKTTCATGCCTTTCGGATTTGGTAA
TAAAGTMCAGCCATACCACGTTTGGTCCGGATCTGATCAATTCGCTTTAG
TACAGTTTGTAGTCATTACAAGGATATTACTCTTTTAATAGATATAACTA
TGATTCACTTTTTACATGTAAAACTAACAAAATGTTAGTTTGTTCCTCTG
ACAGTCTCTACGTAATCAATAATAATTAATAATTCAGACCATTCGGATTA
TTGCTGTGCAAAGAGTTGTTTGTACATGACATAACCATAATCTATTCTTA
CTATTATTATTTTAGGGAGGAGACGATGTATTGGGGAGGATATTGGGAAT
ATAAGTAATTTTTTGATAGTGAGCAATTTACTACATAATTTTAAATTCAG
GTAAGAACATTAGAGACATGAATATTAAGATACCTAAAGAGATATTTCCC
TTTAGTGCGTCATTCTCGAAGAATAAAAACCACTTACCATCAAATGATCG
ATTTGGAGGCATTATCCAAGGCTATGAGCCCTTTGACGTTAAGATCGAGC
TACGATGAGTGATCCACAGATCCATTTATTGTTCACTTACTATTGTGATT
AAAAAAAACATTTATACGCAGTAGTCAATAATAAATAAATAACAAATTTG
ATGAAAAATTAATAATATGGAACTAAAAAGTACATGTGATGTACTTTGTA
CATTCTAAGAAATGATTTGGTTGGACAGAGAAGAGAAGAGAGAGAAGCCT
AGAAACAAGAGATAGCTACTATTGATATATGTATAATTCAGTATAGGGAA
GAAAAAGAAAGTCGAAAATTATTCGTAATCCTAACAATGATTAAGTTATT
ACATATTGTTTATTCTAAAATAAGTTCAACTGTACTTCTAACAATCTAAA
TTTCTAATTCAAACAAATAAACGGTTATCTACAACAAATACAACTAGATA
AATAACAAAAAAAAACAACCATTACAAGTAAAATAACTTATCGTTCAAAG
AGGAACTTGGTTCTTTTTGGAGATTTTCTCCAACCATAGCCGCAAGTTTG
TGGGCATACTAATAGATATGGGAGGAAGAACATAATAGTTTACTATTATT
GAAAAATAACAATTAAGAATGATTACCTGACAGGGTGCAGGGACCCGTAT
GGTACCGGGCCAGTTATAGTACATATGAGTAAGCCTATAGGATAATCCTT
GAAGAAAGTCTGGAGACGTATTTCTCCCTTCCTTAATGACAATGTAGTGG
GAAGGGGTTGCTGAGCCCTCGTTTACTCTTTGTGAAACTATGAAAAAATC
GTAGATTTTTTTATGTGTGATAACCGTGTCCACTACGGTTCCTCCAGGAG
GATTGGACAAATTCATATCCTCTCCTCCTTTAATGATATGATAAAACTTG
GCATTAATACGTTTTTGAACTACGATAAACGTAAATGAGGGGAGCGAAGA
GGAGTAGCAGTCAGTGAGTGAAGAAGTTAATTGCTCCATTTCATATTTTG
CGGACACCTCCAGTTGAGAGTTTCCTAAGCCATCTCGAAAAATAACAATA
TAATCCGGTAAGACCCCATTGATTCCTTTATAACGCACGAGACACTCTGA
AAAGGCCCTCTGAAATCAAAAAGAAGATGTGAGTAAAACACAGCAATAGG
CAATATGTTTACTTCTACCTTCAGAGACTTTATGAGTTCTTCTCCAGGAT
TCTGAACAGTGGACTTAGAGAACCATCGACTCAAAGCCGGATTCATTGAG
GCTACTAACCCGGCAACTGACTCAAGTCTTCTGTTAGGATCGTGGAATMC
ATCCACACCAACCACCATGAGGTTATCTTTGGGTACATCAGCTCCCCACA
ATTCACCACCTAATTTACAATTGATTTGAAGGGTTATTTTCTGTACGACG
GATATCATTCTACGCTCTTGGCTGATTGTTTTCGACAAAATAACTTGCGA
TGCTACGGGACGCTCCAGATAACAAAACTTTTTCACGGCTGAGTACCTAT
CTGCCCTCAAATTAGGAAATATAGTAACAATTAACTGAATATCCGGTGAT
ATCAATTCTCTCATGGCACGGACATAAGAATCACTTCGATCATCACTTAA
TTCTTTGAAAGTTGGACATGATATACTTATCCCCAAACGAGGTCCCTGTT
AAATATCTAGATTAACTAACGGTTTAAAACATGTTAAAATACCACTCAGA
AAGAGTCTGCCTCATTAATTACCCCACTATAGGGAAATTAAGCAATCATC
AAAAATATTGCATATATAAATCTACAATATCACCTTTCATGCTCTGAGTC
AACCTCTACACCTCATCATCATGGCTGTAAAGACTTTCGATTTCTAAATG
AGAAAACGATCAAACATACTACAGAAATGATCCTGTGAAGTATGATCTTA
TTAGAGAATGATTTTCTCAACGTTTTTATTTAAAAACCGCTTCACATCTC
CTTTAAAATATTACAAATATATTGGGGCGCCATCTAGCACCAAATAATAA
TATTACCTGTTTCTCAAAATATTGGAAGAAACCTCTTGCAACATCTTTAA
GCTTATAAGGGAAAATTAAAACCCAATTATTGACTTGAATAGGAGTCAAT
ACATGCCGAGAAGTAATGGCTTTGGTCCAATCCGTCGATGGCCCGACTTT
TTCCTTGTGGCGTTGACCAAAATATAGAGTATCTGATGGTAAATGTCTTC
CATTCATTTTAAGAGGATTTTTGGCCATCTTCATCCCCCAAATTTGCAGA
TGAGATTCAGCTTCTTCATTCGAGAGGACAGATTTTATAAATTTGATCAA
AGACTCATGCCTTTGCTGAGGTGAGAGACGCGTATGACTCGATACATCCT
TCATAAGACGAAAGTCCGATCGCATATCATCACTTAAACCCGTGAGAAAA
CATAGCTCTGGGATTAGCGCAATTAGCTCTGGACTTCCTTGTTTAACCCA
TCGCGCCTTAGGACGATTATATAAAAGGGGCTGCTTATGGTCCAAAATTT
CGAGTCCATAGCGTTGCTTGTAATATTCAACAAATGAAACCTTGAAACAA
AAAAATTAATATTTTGTCTTAATAAGTAATTAAAAGCGAGGAAATATTAA
TTATTATACTTCGACACCATGACCATCCTTAAATGTGGATTTGGGATTCT
TGTCAAAGTCTATTTCGTCAATTCTATACGTCTTACAATTATAGCGTGTT
AGAACCACAGATCCAACAAGCGACTTAATTGACTCATTCTTGAAATCCCC
ACGCCTCCTCATGCTTATATCCTTAAATACATCCAATACAGTTTCGGTTC
GTAAAACTCTATGACTCACATCACATTGAAGAACTAATCCGCCATCAAGC
TCATTGACGGAAGTTATATACCCTGGCCAAACTTCTAATCTACATTAATA
CAAGTTACCATGTTAAAAATATAGCTGGTCGGAAATATTAATACATTTTT
GGGGAAGTGGGCCACTCCTGGAGGTACTGCAATMCCAGGCCGACCCGTGA
CAGAGCCAACGCAAGCATCGGAACATCCATCCCCTGACAGAAATAAGATT
AATATCGAAGAGGACACATGGTCCTCGTATCAGATATTAAGCTGATAAGA
ACAGATACTACACTTTGATCTTAGCCAAAAGGCCGAGAAGCGATACCGAA
AGGGCATTGAAGCAAAGTATTTATAATACAAAACTTTCGGAGCACCTTCG
ATCGGAATTTTGAAGAAGATGATCTACCTATGAATTTGCAAAACTGATAA
AGTCAACAAAGGCCATGACGAGTAAATTAAAAGAGATGGGAATTAATGTT
ACTTTCATACTACTAAATTTATAATTTTTCA back to top
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