EMLSAT00000005721, EMLSAT00000005721-701568 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005721
Unique Name	EMLSAT00000005721-701568
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s309	supercontig	LSalAtl2s309:682709..688189 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005721 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005721	EMLSAG00000005721-688487	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000025009	EMLSAE00000025009-733937	Lepeophtheirus salmonis	exon
EMLSAE00000025010	EMLSAE00000025010-733938	Lepeophtheirus salmonis	exon
EMLSAE00000025011	EMLSAE00000025011-733939	Lepeophtheirus salmonis	exon
EMLSAE00000025012	EMLSAE00000025012-733940	Lepeophtheirus salmonis	exon
EMLSAE00000025013	EMLSAE00000025013-733941	Lepeophtheirus salmonis	exon
EMLSAE00000025014	EMLSAE00000025014-733942	Lepeophtheirus salmonis	exon
EMLSAE00000025015	EMLSAE00000025015-733943	Lepeophtheirus salmonis	exon
EMLSAE00000025016	EMLSAE00000025016-733944	Lepeophtheirus salmonis	exon
EMLSAE00000025017	EMLSAE00000025017-733945	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779314	auto779314	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005721	EMLSAP00000005721	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s309:682709..688189+

protein sequence of EMLSAP00000005721

>EMLSAP00000005721 ID=EMLSAP00000005721|Name=EMLSAP00000005721|organism=Lepeophtheirus salmonis|type=polypeptide|length=510bp
MSILVSILAIGILLLCTYKSYXAIRINLMGPWSNAPPGPSTYPFLGAIPS
LVKDFWGSDRALKSPIDFFDKLHDIYGEDFRLHNGIEDTIILSSLNGIRE
FSNHPNASFRPFNKVLMDIYSDGKDLGMGLGTGGERWKFLRRFSSSAFKS
LSGGASGLNQNFDLEVSEIVAXLRGKAKSPDPIIRNVNIYFDIPILNIIW
WLVAGRRYKYGDPAIQKQFDYLKVLLEEPFIAPLTIIPFALYIPPLRKIY
NRIRNAMNSFRILLSKIVEERRKDNFTDEKRGFIDLFLKAQLDDKDNPYL
SNEDLIMCCQDFFLAGAETSSKTLCTFILYMVLYPNIQENAASEIRDAIQ
KDTQIKSKDRHLLPYTDAVLMEVRRYATPFPITPFRCSNKDIRVNGFDXP
ANVPVQVNLNGVLRSKYCWKAPDIFNPSRFLNEKGAVEIPNAFMPFGFGR
RRCIGEDIGNISNFLIVSNLLHNFKFSASFSKNKNHLPSNDRFGGIIQGY
EPFDVKIELR

mRNA from alignment at LSalAtl2s309:682709..688189+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005721-701568 ID=EMLSAT00000005721-701568|Name=EMLSAT00000005721|organism=Lepeophtheirus salmonis|type=mRNA|length=5481bp|location=Sequence derived from alignment at LSalAtl2s309:682709..688189+ (Lepeophtheirus salmonis)
ATGAGTATCCTAGTAAGCATATTAGCAATTGGAATCCTTCTCCTCTGTAC
TTATAAATCTTATSGAGCCATACGTATTAACTTAATGGGTCCATGGTCAA
ATGCACCTCCAGGTAAGGTGCCTCCCAACTAATAACACTGATATTTTAGT
ATCATGATAAAAATGCAGGMCCTTCCACATATCCCTTTTTGGGAGCCATT
CCTTCCTTGGTAAAGGACTTCTGGGGATCTGATCGTGCTCTAAAATCTCC
AATTGATTTCTTTGATAAACTACATGACATATATGGAGAGGATTTTCGAT
TACACAACGGAATTGAAGATACCATTATTTTATCAAGTACATTGAGTGTC
TTCATTGACAATGAGCTAATAGTTTCAATTAATTAAATTGCTGTAGGTCT
CAATGGTATACGAGAGTTCTCGAATCATCCAAATGCATCCTTCCGGCCAT
TTAATAAGGTTTTAATGGACATTTATTCTGACGGAAAGGATCTAGGTATG
GGTTTAGGAACAGGGGGAGAGAGATGGAAGTTTCTTCGTCGTTTTTCGTC
TAGTGCATTTAAGAGCTTAAGTGGAGGAGCTTCAGGTTTGAATCAAAATT
TCGATTTGGAAGTGAGTGAAATAGTGGCTGRTCTAAGAGGAAAAGCAAAG
TCGCCAGACCCTATTATTAGGAATGTTAATATATATTTTGATATTCCGAT
CTTGAACATAATTTGGTGGCTTGTAGCAGGGAGAAGATACAAATATGGGG
ATCCTGCCATACAGAAGCAATTTGACTATTTGAAGGTACTACTTGAGGAA
CCTTTCATTGCCCCTCTCACAATCATCCCTTTCGCTCTATACATCCCCCC
GCTCAGGAAAATATATAACAGAATTAGAAATGCAATGAATAGTTTCAGAA
TCCTTTTGAGCAAAATTGTTGAGGAGCGTAGGTATGCATATGGGACTCTC
CCTCCTTAGAGTGATTTAGAGGATTAATGATCATTAATGAATATCTCTTC
AACCTAGGAAAGATAATTTCACGGATGAAAAAAGAGGATTCATTGACTTG
TTCCTAAAGGCTCAGCTTGACGACAAAGATAACCCTTATTTAAGTAATGA
GGATCTTATCATGTGCTGTCAAGACTTTTTCTTAGCTGGAGCCGAAACAT
CAAGCAAGACACTGTGCACCTTTATTCTATATATGGTACTTTACCCCAAT
ATTCAAGAAAATGCAGCATCAGAAATTCGAGATGCAATCCAAAAGGTAAT
TAACCTTAGAATAACTTTAATTTTTTTGACATCTAGATTATACAATATTT
TAGGACACTCAGATAAAATCAAAAGATAGGCATCTGTTACCCTACACGGA
TGCAGTTCTGATGGAGGTTCGACGCTATGCCACACCGTTCCCAATTACAC
CATTCAGATGCTCAAATAAGTAATATATTGTAATGTATGAACGTTAAGTG
CATCCCATTACCTAATTTTAGAGATATCAGAGTGAATGGATTCGACAYCC
CAGCCAATGTACCAGTACAAGTCAATCTCAACGGAGTACTGCGAAGTATG
AGTAGACTATATTGAGATCCCTTAATTATATACTCTTACATTAGGCAAAT
ATTGCTGGAAAGCGCCTGATATATTTAATCCAAGTCGATTCCTAAATGAA
AAAGGAGCAGTGGAAATACCCAATGCKTTCATGCCTTTCGGATTTGGTAA
TAAAGTMCAGCCATACCACGTTTGGTCCGGATCTGATCAATTCGCTTTAG
TACAGTTTGTAGTCATTACAAGGATATTACTCTTTTAATAGATATAACTA
TGATTCACTTTTTACATGTAAAACTAACAAAATGTTAGTTTGTTCCTCTG
ACAGTCTCTACGTAATCAATAATAATTAATAATTCAGACCATTCGGATTA
TTGCTGTGCAAAGAGTTGTTTGTACATGACATAACCATAATCTATTCTTA
CTATTATTATTTTAGGGAGGAGACGATGTATTGGGGAGGATATTGGGAAT
ATAAGTAATTTTTTGATAGTGAGCAATTTACTACATAATTTTAAATTCAG
GTAAGAACATTAGAGACATGAATATTAAGATACCTAAAGAGATATTTCCC
TTTAGTGCGTCATTCTCGAAGAATAAAAACCACTTACCATCAAATGATCG
ATTTGGAGGCATTATCCAAGGCTATGAGCCCTTTGACGTTAAGATCGAGC
TACGATGAGTGATCCACAGATCCATTTATTGTTCACTTACTATTGTGATT
AAAAAAAACATTTATACGCAGTAGTCAATAATAAATAAATAACAAATTTG
ATGAAAAATTAATAATATGGAACTAAAAAGTACATGTGATGTACTTTGTA
CATTCTAAGAAATGATTTGGTTGGACAGAGAAGAGAAGAGAGAGAAGCCT
AGAAACAAGAGATAGCTACTATTGATATATGTATAATTCAGTATAGGGAA
GAAAAAGAAAGTCGAAAATTATTCGTAATCCTAACAATGATTAAGTTATT
ACATATTGTTTATTCTAAAATAAGTTCAACTGTACTTCTAACAATCTAAA
TTTCTAATTCAAACAAATAAACGGTTATCTACAACAAATACAACTAGATA
AATAACAAAAAAAAACAACCATTACAAGTAAAATAACTTATCGTTCAAAG
AGGAACTTGGTTCTTTTTGGAGATTTTCTCCAACCATAGCCGCAAGTTTG
TGGGCATACTAATAGATATGGGAGGAAGAACATAATAGTTTACTATTATT
GAAAAATAACAATTAAGAATGATTACCTGACAGGGTGCAGGGACCCGTAT
GGTACCGGGCCAGTTATAGTACATATGAGTAAGCCTATAGGATAATCCTT
GAAGAAAGTCTGGAGACGTATTTCTCCCTTCCTTAATGACAATGTAGTGG
GAAGGGGTTGCTGAGCCCTCGTTTACTCTTTGTGAAACTATGAAAAAATC
GTAGATTTTTTTATGTGTGATAACCGTGTCCACTACGGTTCCTCCAGGAG
GATTGGACAAATTCATATCCTCTCCTCCTTTAATGATATGATAAAACTTG
GCATTAATACGTTTTTGAACTACGATAAACGTAAATGAGGGGAGCGAAGA
GGAGTAGCAGTCAGTGAGTGAAGAAGTTAATTGCTCCATTTCATATTTTG
CGGACACCTCCAGTTGAGAGTTTCCTAAGCCATCTCGAAAAATAACAATA
TAATCCGGTAAGACCCCATTGATTCCTTTATAACGCACGAGACACTCTGA
AAAGGCCCTCTGAAATCAAAAAGAAGATGTGAGTAAAACACAGCAATAGG
CAATATGTTTACTTCTACCTTCAGAGACTTTATGAGTTCTTCTCCAGGAT
TCTGAACAGTGGACTTAGAGAACCATCGACTCAAAGCCGGATTCATTGAG
GCTACTAACCCGGCAACTGACTCAAGTCTTCTGTTAGGATCGTGGAATMC
ATCCACACCAACCACCATGAGGTTATCTTTGGGTACATCAGCTCCCCACA
ATTCACCACCTAATTTACAATTGATTTGAAGGGTTATTTTCTGTACGACG
GATATCATTCTACGCTCTTGGCTGATTGTTTTCGACAAAATAACTTGCGA
TGCTACGGGACGCTCCAGATAACAAAACTTTTTCACGGCTGAGTACCTAT
CTGCCCTCAAATTAGGAAATATAGTAACAATTAACTGAATATCCGGTGAT
ATCAATTCTCTCATGGCACGGACATAAGAATCACTTCGATCATCACTTAA
TTCTTTGAAAGTTGGACATGATATACTTATCCCCAAACGAGGTCCCTGTT
AAATATCTAGATTAACTAACGGTTTAAAACATGTTAAAATACCACTCAGA
AAGAGTCTGCCTCATTAATTACCCCACTATAGGGAAATTAAGCAATCATC
AAAAATATTGCATATATAAATCTACAATATCACCTTTCATGCTCTGAGTC
AACCTCTACACCTCATCATCATGGCTGTAAAGACTTTCGATTTCTAAATG
AGAAAACGATCAAACATACTACAGAAATGATCCTGTGAAGTATGATCTTA
TTAGAGAATGATTTTCTCAACGTTTTTATTTAAAAACCGCTTCACATCTC
CTTTAAAATATTACAAATATATTGGGGCGCCATCTAGCACCAAATAATAA
TATTACCTGTTTCTCAAAATATTGGAAGAAACCTCTTGCAACATCTTTAA
GCTTATAAGGGAAAATTAAAACCCAATTATTGACTTGAATAGGAGTCAAT
ACATGCCGAGAAGTAATGGCTTTGGTCCAATCCGTCGATGGCCCGACTTT
TTCCTTGTGGCGTTGACCAAAATATAGAGTATCTGATGGTAAATGTCTTC
CATTCATTTTAAGAGGATTTTTGGCCATCTTCATCCCCCAAATTTGCAGA
TGAGATTCAGCTTCTTCATTCGAGAGGACAGATTTTATAAATTTGATCAA
AGACTCATGCCTTTGCTGAGGTGAGAGACGCGTATGACTCGATACATCCT
TCATAAGACGAAAGTCCGATCGCATATCATCACTTAAACCCGTGAGAAAA
CATAGCTCTGGGATTAGCGCAATTAGCTCTGGACTTCCTTGTTTAACCCA
TCGCGCCTTAGGACGATTATATAAAAGGGGCTGCTTATGGTCCAAAATTT
CGAGTCCATAGCGTTGCTTGTAATATTCAACAAATGAAACCTTGAAACAA
AAAAATTAATATTTTGTCTTAATAAGTAATTAAAAGCGAGGAAATATTAA
TTATTATACTTCGACACCATGACCATCCTTAAATGTGGATTTGGGATTCT
TGTCAAAGTCTATTTCGTCAATTCTATACGTCTTACAATTATAGCGTGTT
AGAACCACAGATCCAACAAGCGACTTAATTGACTCATTCTTGAAATCCCC
ACGCCTCCTCATGCTTATATCCTTAAATACATCCAATACAGTTTCGGTTC
GTAAAACTCTATGACTCACATCACATTGAAGAACTAATCCGCCATCAAGC
TCATTGACGGAAGTTATATACCCTGGCCAAACTTCTAATCTACATTAATA
CAAGTTACCATGTTAAAAATATAGCTGGTCGGAAATATTAATACATTTTT
GGGGAAGTGGGCCACTCCTGGAGGTACTGCAATMCCAGGCCGACCCGTGA
CAGAGCCAACGCAAGCATCGGAACATCCATCCCCTGACAGAAATAAGATT
AATATCGAAGAGGACACATGGTCCTCGTATCAGATATTAAGCTGATAAGA
ACAGATACTACACTTTGATCTTAGCCAAAAGGCCGAGAAGCGATACCGAA
AGGGCATTGAAGCAAAGTATTTATAATACAAAACTTTCGGAGCACCTTCG
ATCGGAATTTTGAAGAAGATGATCTACCTATGAATTTGCAAAACTGATAA
AGTCAACAAAGGCCATGACGAGTAAATTAAAAGAGATGGGAATTAATGTT
ACTTTCATACTACTAAATTTATAATTTTTCA

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