EMLSAT00000006200, EMLSAT00000006200-702047 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006200
Unique NameEMLSAT00000006200-702047
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s339supercontigLSalAtl2s339:337718..340806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006200 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006200EMLSAG00000006200-688966Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027046EMLSAE00000027046-735974Lepeophtheirus salmonisexon
EMLSAE00000027047EMLSAE00000027047-735975Lepeophtheirus salmonisexon
EMLSAE00000027048EMLSAE00000027048-735976Lepeophtheirus salmonisexon
EMLSAE00000027049EMLSAE00000027049-735977Lepeophtheirus salmonisexon
EMLSAE00000027050EMLSAE00000027050-735978Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776546auto776546Lepeophtheirus salmonispolypeptide
EMLSAP00000006200EMLSAP00000006200Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006200

>EMLSAP00000006200 ID=EMLSAP00000006200|Name=EMLSAP00000006200|organism=Lepeophtheirus salmonis|type=polypeptide|length=227bp
MNIRRDDLPKILKKYATSLQRQILATALTLSLLCSISFSMKFLACEGIKT
LSKFDIRNFTRIEDWSIYPINSLTCGRSPCVVYNDEEDNKTLTTESKEIM
KFIYFKYNSKNRLFAYKDEEKYLQSNLDFFGTYIHTWGVLSHYKYLQYLT
RIIRYPTRCMFIEKPKLLLKHSEQKGPDHLSSTLRDKAGTIIELNPLFQN
VSEFDNEIILKVEGLLDRAEAIISNED
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mRNA from alignment at LSalAtl2s339:337718..340806-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006200-702047 ID=EMLSAT00000006200-702047|Name=EMLSAT00000006200|organism=Lepeophtheirus salmonis|type=mRNA|length=3089bp|location=Sequence derived from alignment at LSalAtl2s339:337718..340806- (Lepeophtheirus salmonis)
ATGAATATAAGAAGGGATGACCTGTTATAAATTAATTAAGACACGTAATT ATGTGTATCTATGAGATAATGATATTTATCTGTAGATTTTTGAACTGTTT AATAGCACAGAAGCTTATCTATTTTGACTCATAGTTCTTTAAAGTTTTGT TTTATCCAGAGCCGTTGACACACAAGGGTGGGATGGACTATTAGTGTCTT TTAAGTCTTTAAAAGTCAAATAATACATAATTTCTAAAAAAAACACGTCC ATTCTAACGCAAATTTTTTTCTAAAAAATGATTTTTTTTTCGGTCTCCTT TTTTATTGTCAAAAGACATTTCATATTACAGGCCGAAAATTTTAAAAAAG TATGCAACATCCCTTCAAAGACAAATCCTTGCGACGGCCCTGACTTTATC TCTCCTTTGCTCCATTTCCTTTTCAATGAAGTTTCTTGCTTGTGAAGGGA TAAAAACACTTTCAAAAGTTTTTCTTTTCTTTCATAATTGTAAGTAATTT TTTTAAAAGTTAAAGACTTTTAAGAATTATTTTCTCTTTCAGAAAGATTA TATATTTACTTTATAATTTTTTGTTGTTGCTTATTCTAATAGAATATTTT ATTGTAAAATATCCTTTCAAATTCTTTTGAAGGATATGCTTCAGACTTTA GTATACAGTGTTGACAGATGGGTTTTTTCTATTAGCTCAAAAATAAGCAA AATTGTTTTAATAGTTAATAGATTAGGATTTTAAATATTTTAAACTCCTT GATAAAACATTTTTCGAAGTTTCAGTGGTAAAATTAAGTTTGATCTGATC AAAAAAGCATTATTACCCTTAAATCTCTGTTTTGAAAGAGTAAAATCATT CGGCAGATTTTTTTTTTTGGGGGGGGGGGGGGAGGGATAGGTTCTGAAAT AACTTTTCCGACCACATTATTTATAAAAATCAAATTGATTTTTTTTTACA AATTTTGACATTTAATTTTTTTAGACAAAACTATAGTTTTATCTGATAGG AGATCTGTTTGTGAGCAAAATCTCTCGTACTACGTAAAATTCTCAGGATC TTTAGATTCAACACAGAGTACCTTGACTAAGCCACCAACCGTATTATACT TCTATAATCTGCTCTACATAAAGTTATATTAAGAGTTAGTTTTCTTGAGA TATATGATTTTCCACTTACAAGTGAAAAGCTTACTGCACAAACTTCTGGA GAAGCATTTTGTTCAAGAAAATCCGAATAAAAGAACTGCCTTCAAAAAAT TAGAGCTATAAACACCAATAGAATGAATTCTTACAATACCCATCAAAATT AAAACAAAGGGATATTCAGTAAAAGTATAAATCATGTTACTAATAATCTT GGATCTTCCTATATTCCTTCCATGCATGAAAAAAAAAAAAAAAACCTGTT GAAATTTGGAATTGAGTTGTAAATTTATTGTCATCTGATACTCCAAGAGA AAACTTTCAACTCTCTTGGACCAAGAGAATAGAAGATCCTATGAGCTTCC AATTTTAAGATTAAACATTTTATAGTTAAAACATTGTATTTGATGGCTTT CTCTTCTAAGTATTCAGGATCCTCATATTCTTAAATATTTTTAATTTTGT AGTTTGATATTCGTAATTTCACAAGAATCGAAGATTGGAGTATCTATCCC ATTAATTCATTGACCTGCGGGTAAGATGGAGAAATGCTCTTCAAACGGCT ATTTGAAAGATTAATATCAAGCATGAGCCATTTAATGGTAAACGACCTTG AAACACAAATCATTCATTCCTACTATTTCCGGATTTTATGAATTTCAGAC ATAAATATTGTTGTCTATATGATAAGTGCAAAATGTAATCCTTTTGTTCT TGCTACGAATAGAACAAGTTCATTAATATAATATATTATGACAAAAAAGT GTAAGATCAGTGCATAATATACCGTAAAAATTATTCATTAAATTTGATTA ACAAAAAAAAAAATAGTAAATATTTTTTAATAATGTATCTAAAAAGACAA AAATAAACCGTCCTGTTCAGTTCCATCAATGAATCTAAAATATGGATAMT AAAAAWATGTGGACATATTAATGGAAAAAAWATTTGCATATCTGTCGAAG TCTTTCAAAACTCAAAAAAACTAATGAAAAGTACCTTTTTTTGCATATTA TTTATACAATGAATCCCCAAACTTAAGAATTTTTTTTATTTCTTACCTAT AAAATAAATGCTAAAAAACATCTTTTAATTAGGATCAATTCTTTAAAAAA TGGTTTTTTACTTTCAATTTGTACATCTAACATCTATAAATCAAAAAAAT AATTACTTTTATCAATTCAAACTTATTGAAGTTTTATTAGAGGATTTTAT AAGTGAAAAAAAGGTTTGTTGGAGAAAAAGATAAACGGGACTCTTAGTAC AACTCTTAGAAGTGATATCGTGATTGATTTTGTTTGAAAATTTCAAAAAA TTATGCAACATTTGTTACCATATCTTCACCTAGTCAAAAGGTTTGAATTA CTATATTTGAGAAACATATAAGTAGTATTGAGTTTAAATCTGTAGATATA TGTAGATGGCTAAAAATTTGAAGACTGCTTCCTGGATTTTAATCCAAAAG GAGAAGTCCCTGTGTTGTTTACAATGATGAAGAAGACAATAAAACTCTGA CTACAGAGAGCAAGGAGATTATGAAGTTTATTTATTTCAAATATAATTCA AAGAACAGGCTTTTTGCATATAAAGATGAAGAGAAATACCTTCAAAGTAA CCTGGATTTTTTTGGGACTTATATTCACACGTGGGGTGTATTATCTCACT ATAAATATCTTCAATATCTAACTCGTATTATTCGATATCCCACTGTAACT TTATTAAATATCATTCTATTGTTAAGCGATGCATGTTCATTGAGAAACCA AAATTACTTTTGAAACATTCGGAGCAAAAAGGTCCGGATCATCTATCCTC TACTTTGAGGGATAAAGCGGGTACAATAATTGAGTTAAACCCTCTCTTCC AAAATGTGTCTGAATTTGATAATGAAATCATTCTGAAGGTCGAAGGGCTG TTGGATAGGGCTGAAGCTATTATATCTAATGAGGACTGA
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