EMLSAT00000006214, EMLSAT00000006214-702061 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006214
Unique NameEMLSAT00000006214-702061
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s33supercontigLSalAtl2s33:164805..166416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006214 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006214EMLSAG00000006214-688980Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000027119EMLSAE00000027119-736047Lepeophtheirus salmonisexon
EMLSAE00000027120EMLSAE00000027120-736048Lepeophtheirus salmonisexon
EMLSAE00000027121EMLSAE00000027121-736049Lepeophtheirus salmonisexon
EMLSAE00000027122EMLSAE00000027122-736050Lepeophtheirus salmonisexon
EMLSAE00000027123EMLSAE00000027123-736051Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773660auto773660Lepeophtheirus salmonispolypeptide
EMLSAP00000006214EMLSAP00000006214Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006214

>EMLSAP00000006214 ID=EMLSAP00000006214|Name=EMLSAP00000006214|organism=Lepeophtheirus salmonis|type=polypeptide|length=475bp
MEDTNNAVNVEIRSSNGFLYQLFTASIASQAALLMGCSLGWSSPVIVLLS
KSKDGFVLSKSEEGWLASILFFGAIAGGPCAGYLIDKXGRKLALGVNAVL
YALSLGVIVSAQYKWMLFAGRFLNGVSCGFTSISAPTYISEISSASNRGK
LGIMFQIMVTIGILLINLALDYCFYYYNGFHMVIFLYFIPESPVYHLINN
NEPLARSVLQRLRGDEDIEEEVNVLKNVVASLNEKAAFSDLLKSCNLKPL
LISILVMMGQQASGINAVLSYSESIFKSAHTNLKPLAETIIMDLVMVIAT
FFAAIVSDKLGRRVLLQISGSSIILTLFTIGTYYFLDSHNYEIAKTIRWL
PLLCLSLHVISFSMGYGPIPWLLMSEIFAPEIKGFGSAIASGSNWGMGFL
VTLTFPILSDLVGQYMVFFIYGSIMIILLILSIAFVPETKGKTLDEIHRL
FKPNEVPQNDEEGVEEEREELNEDD
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mRNA from alignment at LSalAtl2s33:164805..166416-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006214-702061 ID=EMLSAT00000006214-702061|Name=EMLSAT00000006214|organism=Lepeophtheirus salmonis|type=mRNA|length=1612bp|location=Sequence derived from alignment at LSalAtl2s33:164805..166416- (Lepeophtheirus salmonis)
ATGGAGGATACAAACAATGCTGTAAATGTTGAAATTCGTTCATCGAACGG ATTTCTATACCAACTTTTTACTGCTTCAATTGCATCACAAGCTGCGCTTC TCATGGGCTGTAGTTTGGGTTGGTCAAGCCCCGTAATCGTATTATTAAGT AAATCAAAGGATGGATTTGTTCTCAGCAAGTCAGAAGAGGGATGGTTGGC CTCCATATTATTCTTTGGTGCCATAGCAGGAGGTAAATATCTATTCACTT TTGAACAGGATTAAATCATCCTCATTTTCCTTAGGTCCTTGCGCTGGATA CCTGATTGACAAAKCTGGTCGAAAATTGGCGTTAGGAGTCAATGCTGTAT TGTATGCATTGTCTCTTGGAGTTATTGTATCTGCGCAATATAAGTGGATG CTATTTGCAGGACGTTTTTTAAATGGTGTGTCATGTGGGTTTACTTCTAT TAGTGCCCCAACTTATATCTCAGAAATTTCTTCAGCGAGTAATCGAGGGA AACTAGGAATAATGTTTCAAATTATGGTTACCATTGGAATTCTTCTAATA AATGTTATAGGATTGATTGAAAGTTGGCGTTGGATTACTGTTTCTATTAT TATAATGGATTCCATATGGTTATTTTTCTCTATTTTATTCCGGAATCCCC AGTTTATCATCTGATAAATAACAACGAACCTTTAGCAAGGAGCGTTCTTC AGGTATTATACTTTTTTAGTATAATGGATCTTATTTTTGTTGAAACTATA CTTGATTCTTTTTTAGAGATTAAGAGGTGATGAAGATATTGAAGAAGAAG TTAATGTGCTGAAGAATGTGGTTGCATCATTAAATGAAAAGGCAGCCTTT TCTGATTTGCTTAAATCTTGTAACTTGAAGCCACTTCTTATAAGTATATT GGTGATGATGGGTCAACAGGCTTCTGGAATAAATGCTGTTCTATCCTACA GCGAATCCATATTTAAATCTGCTCATACCAATTTAAAGCCTTTGGCGGAA ACAATTATAATGGATTTAGTCATGGTTATAGCTACTTTTTTTGCTGCAAT CGTTAGTGATAAGTTAGGGAGAAGGGTATTGCTACAAATATCTGGTTCTT CCATTATATTAACATTATTTACTATCGGAACCTATTATTTTTTGGATTCT CATAACTACGAAATTGCTAAAACAATTCGTTGGTTGCCTTTGTTATGTTT GAGTCTTCACGTTATCTCATTTTCAATGGGATATGGTCCAATTCCTTGGC TTCTTATGTCTGAAATATTTGCACCTGAAATTAAAGGGTTTGGGAGTGCC ATTGCTAGTAAGACTTATTTTTTCTCTTATAAGCTCCTGTTTTAACCGAT ATTTATAGGTGGCTCGAATTGGGGTATGGGGTTTCTTGTCACTTTGACAT TTCCTATTTTATCTGATCTAGTTGGACAGTACATGGTCTTCTTTATTTAT GGATCTATTATGATCATTTTATTAATTCTGTCAATTGCATTCGTACCGGA AACCAAAGGGAAAACATTGGATGAGATTCATAGATTATTCAAGCCAAATG AAGTGCCTCAAAATGACGAAGAAGGAGTTGAAGAGGAGAGGGAGGAACTG AACGAGGACGAT
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