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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
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Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
|
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D F28 |
g158_glycin_trans |
female |
-Missing-
-Missing- |
24.08.2012 - 13:22
03.10.2012 - 00:00 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s343 | supercontig | LSalAtl2s343:134544..138553 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006302 >EMLSAP00000006302 ID=EMLSAP00000006302|Name=EMLSAP00000006302|organism=Lepeophtheirus salmonis|type=polypeptide|length=1094bp
MSLKPLKDLKPSSKDASSTSSSSSTHQSKNNPSSPERNSPTSTSGGDAHL
LPQGFRSHSSFLIEDILFQRPKLIADLANRSSESSELSKEAPNSSSCSLS
ASGFSKYINDYNQLAAYLSPMGLAAAAXQASAAAGILQQSILHHKHHSPS
GNNNASPTTNSTPPFFLSSSTYYLQGYIKFLSHEYCLILLDLPFSSLFTT
ESGKQCRRRKARTVFSDHQLCGLERRFEAQRYLSTPERVELATALSLSET
QVKTWFQNRRMKHKKYIRKQSELPSSQMIEGNSGSTPIILICSYFFIFVT
HDDLEVKNCDLLEVSPLRGKEGFIISWKMSNDDEGLRPLGQMEENESTLR
DALPMSPLFEKMPPLSRFRCLSDGEDRYSYFSTLPPKQXPEAYSTSSSFQ
YAKGTPKRASSSDRLLSRSLALTSTYTSFDEITLEVEKEACTLPVETSEL
QPSSTLDRKIFPNKYVGSLDSGLGGSSTLQSAPSNSESIFGKSFDDYPMR
TPLGIPDWNDQIYESGNVIQWSNRYDFVIIGLLLGCTLRTLIELPLMALQ
NGGWIFLVIYGLFLVIVGIPLSFLLSALGQYSQRGLVHAWKIVPFFIGIG
SILLCLFFVSAVLDSAVASYALLYVLGSFLKELPWTMCDGDWNNIKDCDR
FDHVRSVSVMSESCIAPESNCTSRSEIHSTALLFWEKFNGFSLESGREVY
YEPRWETFASAGFVWLVIWLISIKNFEFVRKVLYSIVIFFILAFTTYFIR
MSVMEGTGHWNYFGFDYEKCLDYHFWARAAGLAIRTSFASGLPLFLGSRN
FTFYKVHYQTVLLQFLLYLMGILSTLAFCALFAVNKNLVHLKELDYISFT
FVVPSEAFRGAPMNRLWSLLFFALIFSGQLGSVLLFLEGIYTTLEDVGFA
LESKLNYSLKRFIKCTFISICGLICTLVFSTSLGLALYHTIIEYFFGITE
VFIALLTIVSISYIYGLRLWSNALHYMLKTECRIFYSSWLVICPLVILYV
LIVRLSDLKLDNSMELVIAAVQSLLILQIPICAFCKFFYSGINCSRELFV
PSSDWGLRSKRIPXGSMHXTLLLSKRSDKFSRREDIKSNPYSYY back to topmRNA from alignment at LSalAtl2s343:134544..138553- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006302-702149 ID=EMLSAT00000006302-702149|Name=EMLSAT00000006302|organism=Lepeophtheirus salmonis|type=mRNA|length=4010bp|location=Sequence derived from alignment at LSalAtl2s343:134544..138553- (Lepeophtheirus salmonis)
ATGTCTTTGAAACCATTAAAGGATTTAAAGCCTTCATCTAAGGATGCCTC
AAGTACTTCATCATCATCCTCTACCCATCAAAGCAAAAATAATCCATCAT
CCCCAGAGAGAAACTCACCCACAAGTACTTCAGGTGGAGATGCTCATCTC
TTACCACAAGGCTTTAGATCACATTCTTCATTCTTAATAGAGGACATTCT
CTTTCAGAGGCCAAAGGTATAATAGCTTCCTCACTCCTTGAATCTTGATT
CACATTTTTTTTTAATAGTGAAAACTGCTCCACGAACAAATTTTCTAATT
CATTTTTTCCATTTAGCTTATTGCAGACCTTGCTAATCGCTCCTCCGAGT
CCTCAGAGCTATCAAAAGAGGCTCCCAACTCTTCTTCATGCTCCCTCTCA
GCATCAGGGTTTTCGAAATACATCAACGACTACAATCAATTAGCTGCATA
TCTATCMCCCATGGGGCTAGCCGCTGCAGCGKCTCAAGCCTCCGCAGCAG
CAGGAATACTTCAGCAGTCAATTCTTCATCATAAACATCATTCTCCATCA
GGAAATAACAATGCTTCTCCAACAACAAATTCAACACCTCCATTCTTCTT
GTCCTCAAGTACGTATTATTTACAAGGGTACATTAAGTTCCTATCTCATG
AGTACTGCCTCATTCTTTTAGATCTCCCATTTTCCTCACTCTTTACGACG
GAGAGTGGAAAACAATGTCGGAGGAGAAAGGCTCGTACAGTTTTTTCTGA
TCATCAGCTCTGTGGTCTCGAAAGACGATTTGAAGCTCAACGTTATCTCT
CCACTCCAGAGCGTGTTGAATTAGCCACGGCTCTAAGTCTTTCTGAAACA
CAAGTTAAAACATGGTTTCAAAACAGACGAATGAAACACAAGAAATACAT
CAGAAAACAGTCCGAACTCCCTAGCTCACAAATGATTGAAGGGAATTCAG
GGTCCACTCCAGTGCATGAAGATGATGAGTCCAATGATGAAGAATCATTT
GAAAGAGAAGAGNNNNNNNNNNNNNNNNNNGGTCAAATTCCTTATTTCAT
CCTACACACTCCAATACCGCAAATCATAAGTTTGATTCCTCATTTTCGTA
TACCTCTTCAAATAATAAAAGTCATTTTAAAGTATCGTCATCCGTGAAGA
AAGAAAATCCAAGTTATTAATACTAAAATGTCAATTATACATAAATAATA
CATAATATTAAATATAATATATTGAAATCTCAAAAGAAAGTATAAAATTC
CATGATTTGATTTGATCTAATATCCTCCTTCTTTGAATTATAGTTCATCT
ATGAAATAAATAAAATGTCGAAACAAGATTATCTTGATTTGTTCTTATTT
TTTTATCTTTGTCACTCATGATGATCTAGAAGTTAAGAACTGTGATTTAC
TTGAAGTCTCTCCCTTGAGAGGAAAAGAAGGGTTTATAATAAGTTGGAAG
ATGTCGAATGATGATGAGGGACTCCGGCCCTTAGGACAGATGGAGGAAAA
TGAGTCTACCCTGAGGGATGCACTACCCATGTCCCCTCTCTTTGAAAAGA
TGCCCCCCTTATCTCGATTTCGGTGTCTCAGTGATGGGGAGGATCGCTAT
TCCTATTTCTCCACCCTTCCTCCGAAACAAYCCCCAGAAGCCTATTCTAC
GTCCTCTTCTTTTCAATACGCAAAAGGAACTCCTAAAAGAGCCTCTTCCT
CGGACCGTTTACTGAGTAGAAGTTTGGCCCTCACCTCCACCTACACCAGC
TTTGATGAAATTACACTGGAAGTGGAAAAGGAGGCATGTACTCTCCCTGT
GGAGACCTCGGAGCTTCAACCTTCTTCCACTCTTGATAGAAAAATATTTC
CAAATAAATATGTCGGATCTTTAGACTCTGGACTAGGGGGATCATCCACT
CTTCAGTCTGCACCTAGCAATTCCGAGTCCATATTTGGGAAAAGTTTCGA
TGACTATCCAATGAGAACACCTCTGGGTATACCTGATTGGAATGATCAAA
TGTATGCAAATTCTCTTTTTTTAGATTATTATATTTGAAACCAAACAATG
TAATTTTAGATATGAGAGTGGCAACGTGATACAATGGAGTAATCGCTATG
ACTTTGTCATCATAGGACTTCTTCTTGGTTGCACACTTCGAACACTCATT
GAGCTTCCTCTAATGGCACTTCAAAATGGGGGATGGATATTTTTAGTTAT
ATATGGTTTGTTTTTAGTCATAGTTGGGATTCCTCTCTCCTTCTTGCTAT
CTGCATTGGGGCAATACAGTCAGCGAGGCTTAGTCCATGCATGGAAGATC
GTTCCTTTTTTTATTGGCATCGGTTCTATACTTCTCTGTCTTTTCTTTGT
GAGTGCAGTTTTGGATAGTGCTGTGGCCTCTTATGCTCTTCTCTATGTGT
TAGGATCTTTTCTTAAGGTATTATGATATGAAGGATTTATTTTACAATTA
TTTTTATCTCTTCAATAAATAGGAACTACCTTGGACAATGTGTGATGGAG
ATTGGAACAATATCAAGGATTGTGATCGATTTGATCACGTTCGCAGTGTT
TCTGTCATGTCTGAGTCCTGTATTGCTCCTGAAAGTAATTGTACATCTCG
CTCCGAAATTCACTCAACTGCTCTTCTCTTTTGGGAAAAATTTAATGGAT
TCTCTTTAGAGAGTGGTAGAGAAGTGTATTATGAGCCTCGATGGGAGACC
TTTGCTTCAGCAGGATTTGTTTGGCTTGTTATATGGCTGATATCAATCAA
GAACTTTGAATTTGTTCGCAAAGTCCTCTACTCTATTGTGATATTTTTTA
TACTAGCTTTTACTACATACTTTATTCGAATGAGCGTTATGGAAGGAACA
GGTCATTGGAATTATTTTGGATTTGATTATGAGAAATGTCTCGATTATCA
CTTTTGGGCTAGAGCGGCTGGATTAGCTATTCGAACATCATTCGCTTCAG
GACTTCCTTTGTTCCTTGGATCAAGGAATTTTACTTTTTATAAAGTGCAT
TATCAAACGGTTTTACTTCAATTTTTGCTCTATTTAATGGGGATTTTGTC
AACTCTTGCATTTTGTGCCTTGTTTGCCGTGAACAAAAATTTGGTGCATT
TGAAAGAATTGGACTACATTTCTTTTACATTTGTTGTTCCCTCAGAGGCT
TTTAGAGGGGCACCTATGAATCGACTATGGAGCTTATTATTTTTTGCCCT
AATATTTTCTGGGCAATTGGGGTCTGTACTCTTATTTTTGGAAGGGATTT
ATACGACTCTTGAGGACGTTGGGTTTGCTCTCGAATCTAAATTAAATTAT
AGTCTTAAACGATTTATTAAATGTACTTTTATATCAATTTGTGGACTCAT
TTGTACTCTAGTCTTTTCCACAAGTTTGGGATTGGCACTTTATCATACCA
TAATTGAGTACTTTTTTGGGATAACTGAAGTTTTTATTGCATTATTGACG
GTAATTATATGACCAATTAATCTTTAATTCAATTATATTGGTTGTTGTTT
TTTTTCCAGATAGTTTCAATCTCTTACATTTATGGACTTCGACTTTGGAG
TAATGCTCTTCACTACATGCTTAAAACAGAATGCAGAATATTTTATTCTA
GCTGGCTTGTCATTTGTCCACTAGTTATTTTGTACGTTTTGATTGTAAGG
CTCTCTGATTTGAAATTGGATAACTCTATGGAGCTCGTCATCGCTGCTGT
TCAATCTCTTTTAATCCTTCAGGTTTATTTATTTATTTTTAGCTTATGAT
CATTTGTAACTTGAGACTCAGCACACGACTCCCCCTCCCTAATCCTCTTA
TCCTTTCAGATTCCTATATGCGCATTCTGCAAATTCTTCTACTCTGGAAT
CAATTGCTCGAGGGAACTTTTTGTACCTTCATCTGATTGGGGTCTTCGAT
CTAAAAGAATTCCCMCAGGCTCAATGCATGNTACTCTTTTACTCTCTAAA
AGATCGGACAAGTTTTCTCGAAGAGAAGACATTAAATCAAATCCTTATTC
TTACTATTAA back to top
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