EMLSAT00000008265, EMLSAT00000008265-704112 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008265
Unique NameEMLSAT00000008265-704112
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
S F162 UN41_3352 female
  1. Adult
 Normal
no visible phenotype 		14.10.2014 - 11:05
14.11.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s49supercontigLSalAtl2s49:962253..963657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008265 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008265EMLSAG00000008265-691031Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036680EMLSAE00000036680-745608Lepeophtheirus salmonisexon
EMLSAE00000036681EMLSAE00000036681-745609Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780168auto780168Lepeophtheirus salmonispolypeptide
EMLSAP00000008265EMLSAP00000008265Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008265

>EMLSAP00000008265 ID=EMLSAP00000008265|Name=EMLSAP00000008265|organism=Lepeophtheirus salmonis|type=polypeptide|length=150bp
MRTLVFLAIIASALANPKYPDTCGLENKPLADSKIVGGQEAARNQFPWLA
SVYTFGACTGSVLDENWIITAKHCIIPLEGAKVRVGVHSIADGAYEPNMQ
TRNSSEIHVSSTGDFALIKLESPLELNEYVRPVCLPTREDANMTFGYDQF
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mRNA from alignment at LSalAtl2s49:962253..963657-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008265-704112 ID=EMLSAT00000008265-704112|Name=EMLSAT00000008265|organism=Lepeophtheirus salmonis|type=mRNA|length=1405bp|location=Sequence derived from alignment at LSalAtl2s49:962253..963657- (Lepeophtheirus salmonis)
ATGAGGACATTAGTATTCTTGGCTATCATTGCATCTGCTTTGGCTAATCC
AAAATATCCAGATACTTGTGGTTTGGAAAACAAACCTTTAGCGGATTCAA
AAATTGTTGGAGGACAGGAAGCAGCAAGGAATCAGTTTCCATGGCTAGCT
TCTGTATATACCTTTGGTGCTTGCACTGGTTCTGTTTTGGATGAAAATTG
GATTATAACTGCTAAGCATTGTATAATACCTCTTGAGGGTGCCAAAGTTC
GTGTTGGCGTTCATAGTATTGCAGATGGTGCATATGAACCAAATATGCAA
ACCCGAAACAGTTCTGAAATTCACGTATCGTCGACTGGAGACTTTGCTTT
AATCAAATTGGAGAGTCCTTTGGAATTAAATGAATATGTCCGACCCGTTT
GCTTACCAACACGTGAAGATGCTAATATGACTTTTGTTGGCAAATCGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTG
ACTAATCCTAAATGTGTTGGAGGTATCAATGGATATGCACGTATGACATC
ACATCTAGACTTTATTCAAGAAATAACTGGAATGGTGATTGAATAATGCA
TTTTTCATTTTTCTTGAATAAAGATATTCTACCATATTCGAATAAATTTT
GGAACAATAAGAGTATTGAGCACTAAATAACTCTTTATATAAAGTATCAT
TTATTTATGTACATTTACAGTGGTTACAATTTATATAATTATTAGGAATC
AAGCACGGCTGACTACCCTCTCCAGCTTAATCAAATCTTCATCGTTTGTT
TTAGAGATTAGGGTGTCACTGGACCAAATATCATAAAATTGGTTTTCCAT
TTAAAAAAGTATTTTGTATGCTGTCTAATTTTAGGTTAAGTTTGGAATTT
GACTTCCTTCTCCCCAAATTATAGTCCTTGAATTGTTTCATTGTCAAAAA
TGCGCAGTTTACAATTTTTAATCTTATTTTTTACCAGGGCTACGATCAGT
TTTAG
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