EMLSAT00000009520, EMLSAT00000009520-705367 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000009520
Unique Name	EMLSAT00000009520-705367
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s612	supercontig	LSalAtl2s612:286575..292619 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000009520 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000009520	EMLSAG00000009520-692286	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000042250	EMLSAE00000042250-751178	Lepeophtheirus salmonis	exon
EMLSAE00000042251	EMLSAE00000042251-751179	Lepeophtheirus salmonis	exon
EMLSAE00000042252	EMLSAE00000042252-751180	Lepeophtheirus salmonis	exon
EMLSAE00000042253	EMLSAE00000042253-751181	Lepeophtheirus salmonis	exon
EMLSAE00000042254	EMLSAE00000042254-751182	Lepeophtheirus salmonis	exon
EMLSAE00000042255	EMLSAE00000042255-751183	Lepeophtheirus salmonis	exon
EMLSAE00000042256	EMLSAE00000042256-751184	Lepeophtheirus salmonis	exon
EMLSAE00000042257	EMLSAE00000042257-751185	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775926	auto775926	Lepeophtheirus salmonis	polypeptide
EMLSAP00000009520	EMLSAP00000009520	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s612:286575..292619+

protein sequence of EMLSAP00000009520

>EMLSAP00000009520 ID=EMLSAP00000009520|Name=EMLSAP00000009520|organism=Lepeophtheirus salmonis|type=polypeptide|length=230bp
MDLKLYPLDRQVCEMRIASYGWTTDDLIYRWKSKDPVQFVQDLNLPRFKL
ESFSTSYCNSKTNTGSVILYTEFPIVKLVFFNSGEYSCLKINLVFKREFS
YYLLTIYVPSCMLVIISWVSFWLDSKSVPARVALGVTTLLTMSTQTAGVN
RSLPPVAYTKAIDVWSGACVIFVFSALLEFAFVNYASRHDRRKGRKSRSA
MNYNMDDDEIDYDQGLDCTSRIRSHYGKFE

mRNA from alignment at LSalAtl2s612:286575..292619+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000009520-705367 ID=EMLSAT00000009520-705367|Name=EMLSAT00000009520|organism=Lepeophtheirus salmonis|type=mRNA|length=6045bp|location=Sequence derived from alignment at LSalAtl2s612:286575..292619+ (Lepeophtheirus salmonis)
ATTGTAATCTCTACTAGGAGAATCAACGATTCTACTGGATTTAATTTTTT
GGACCGATCCAACACTAGGAGCATTATATAAAATATTAATTATAATTTTC
CCCTACAAAAGGTGTGTTTTTATTGAGCCTTAACTTTCCTGCATTAACGC
GTTTTTCATAATACATTAATGATAAAAATGTATACATATTTCATGGTTAT
TACAAGATTAATTTGATATGTATAAGCCGTATGAACCTAAGGGTCAATTG
TCCCTCGTACCCCAAATAATTAAGCATTATATGAAAAATTTTACTCTTAC
ACATTTATTCCTCTGAAATTCCAGCACCTTCATGCTAAAAATTGCTCCAT
ATCAGCGTTGATTCCCAGGGATTATCCAGTCAATAATTCCCAGTGATTCC
AAAAAATTTGCATTATCGATTGTCTGGTATTTTTTTAACCATTTCTGAGG
AACAATGCATTTAATTTTATAGTGCTAATGAATGTCTAGCATATTTCTAC
ATATTAAAACAAGCTTTTAATGGAAGATTAATATATAAAAAAAGAGTCAA
TTCTGAACCTTGATAAATCGCATTCAATATTTGCGTTACGGAGTATTTGA
GTGAAATTGAAGTCCAAGTACATTTGAGAGAGGATCCTCTTACAATTTTA
CCCACATCAACTGAATCAGATCGTAGTTTTTCAAGTCTGTGAATCTTTTT
AAAGGGGAGACAGGTACCACGTCTATTCTCGTTGGGGAGGGTGTGGTTAA
ACTTAAAACGATGTAATCTTGAATAATATATGAAGATGGAATAAATGACG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCAACACGAGGTTCTATGGGGGGGGGGGTTACTGAACTGAA
AGAACCACGTTGATTATGAATGACCTTTTCTTCTTGTTACGAACAAATTA
AAAATTTTAATAAGAAAGAAAAACTGAAATCTACATAGTCGATAATTTTC
TTGGAAATTTTCGATAATTAATTTAGAGTTAGTTGAATGATCATCGATTC
CCAGAATTCCTAAAAACAAGAATAATTATTTTTCAACCATGCTTCTAATG
CCCCAGTATATTTTAAGTTGAATTTATTTTTTTGTTTGTCTATATATCTC
TAGGTTATAAAGATTTAATGTCCATCAAAATATAATGGGGAAACGTTCAA
TTTGGACAAGCATTTTCCTTTTTCTTCTCGTGTATTTTAAGTGAGATATT
TTTTACTTAAAAAATCCCTATATTTGTTATGTTATTAAAAATGTTCCTTT
ATAGCTCAACAGCCCTCCAAAATAGACGAGATAAGATAGATTATCGTTTG
AAGGAAAAACAAATCCTAGACCATGTTTTAGGGCCACTCCGATATGACAA
AAGGATTCGACCACCTGGATCCAGCAATTTGACAGGTTATTTACTATAAA
ATTGTCTTTGTTATTGATTAAATGTAGGGTGATCATATTTTGTTTTCTAA
AAAAGAGGACACGTGGCGGGATATCAGTGTCGAGTTTTGTGTTTTTTCAA
ATATTTTTGAAATGAATCAAATTGAAGAATCAATTTTGAGTATGTACATT
ATGATTCTTATTTTATTTTTGGAAAATATGTTTAGAATCTTCTATTTCTA
TTTCTTCAATGGATTTTTTTTGGGGGGGGGGGGATTTTAAACTTTTTTAT
ATATCTTTTTACTTTTATTAAAAAAACATAAAGTCTTCGGCAATTTGTCC
GACAAAACGCTGTACATTTCATGAATTTATAAAAAAAAAGTCCCGGATAC
TCCGTATAAAATATAAAAGTGTATATGTCCCGGGGAAACGGAGATTTGGT
CCTTATGTGACAAATTAAAGCAATACTTAAATATGAAACATTTTATTACT
TAATTTATATTTCCAGTTAGTGTGGGACGAACATGGGCGTTCAAATAAGA
TTTTACTTTATTTCTCATTTAATTAATTTTTTTGATATTTATCATATTAG
GCCCATCTCCTACAGTTGTCTCAATAAACACGTATCTCCGTGCTATAGAT
CGCATAGATGATTATAAAATGGTAAAGTACCTCTTTCAATCCAGCTTTTC
CTCATTTACCTACAGGGCCGGTTATAAAGAGCATTTGGTGTTTATTTCGC
TCGACCACAATCTTGATAATATAAAATAGAGGCTCTGCAAACTTTTCATA
AATTCAATAAATATTTTCTAAAAAAAAAAGTCATTTGAATAAATAAAAAT
GTGAAAAGGTTTCCCACAATTTATTTTCAAAGAAAATGAGGATTCAAAAT
TTATTTTCTCAAAACCAAACCATTTCAAAATAAAATTCAAATTTAAAAAA
AGGAAAGAAAGTGCTTCAAATATTTATCTTTGCTCTATGCCCCGCTCAAG
ACAAAACCAGCCCTGTGATATACAATGCACAAAATAATTTGTATTCTTTT
ATTCCAGGAGTACAGTGTACAATTAACATTCAGAGAAAATTGGATGGATT
CGCGTTTAATGTTTAACGATTTGAACGGTAAGAATGGATATTAAATGGAT
AACAGTGTCGTAAATCGTAATCACAGTTTTTTTTATTGCGGGCGGGGGTT
AATGTAATCCAAGGTTAATAGAAATACAAGGTTAAACCATCATGTAATCG
GGATTGCATAGAATTGTCAATTTGATGTATCGTACCGACTGCTCGGCAAG
ATAGAGATATTTTGACAAAACACGCAACCACTCATAGTCTATGACGTCAC
TATTCACAGAATTTTCAATTTAATGTATCGTACAGACTGTTGGACAAGAA
AAACAGATTTTGAGAAAACACAGGACCACTATTACACTATGACGTCAATA
TTAAAAGGCGCGGTGGAAGTCAAACATCAGTCGTACACGCATTATGGTAT
AACCTTCTATTTCTATTAACCTTAGTGTAATGTATCATAAATTTTTGAAT
ATTAACTGAGAAAAAAGAATTTTAATTCGGTAGATTATATATAAATAGGG
TAGATTTCCCTGGCGTTGCCCGAGACATTAAGCAATTAAAATTAATTCTG
AACTCTTCTGCTTTATATAAAACAAAAAATTACGACCGTAAAATTCGAAG
AGTTATACTTGCAGCATATTACTTTGGTATCTTTGCACACTTTRTTRTAA
ACGGYGATTAWAAGGTTTAGAGNGGGGGAATATTCAAATTGAACCGYCAT
TCSCTCAATCAAAGARTTCTAATTGGCTATATTTAATATTATAATGCAAT
ATGAAAATTGAATTGTCAAATCCATGCTTAGGTATACTTTAAGGTATATT
ATAAAGTTTATTTTAACTTGTTAGAAAAAAACAATTATTTACTTTTTAAC
TTATCTTTAAACTTTTTATTTATTATATATTAAATTGAAAAAAAATATTG
GTATCTATATTTATAGCTAGCTATTGAAGCTCATCATTCCACTTTGGATA
ATCAAAAAAATTTAATTTTTTATTTTTCCATTTAGTTTCATATTGAATTG
GTGTTAATTTATTTTTAATATCGATACCAAAATAAAAATATTTTAACATC
ACTACTCTGAAGGAAAAGAAAACTGAATACTGTTAATGCTTCAACACTGC
CCATGAAAAAATGTTTGAACAGCTTATTGTGAGCTGAGATAGAGATTGCA
AAATCATCAAACCATTTGACAAAATAAAACATATTTTGAAATAAAAAATA
AATCATAGTCTTATGATGAAGATATCCCACATCAAAGAATGTGGAAAGTG
TGAGAAGTAGATAATCTTCGCACATTGCTTATTTTGATACAAAGCCTAAC
TAAAAAATTACTATTTTGATTAAATATGTATGAACATAAAATAAAGATGG
GGGGGAGTAAAAATTCATAATTTATCATCATAGGTAAAATAAAATACTTA
ACATTGACGGATGCTGAAAAAGTTTGGATGCCTGACACTTTTTTTCAAAA
TGAGAAACTTGGACATTTCCATAACATTATTGTACCCAATGTTTATGTCC
GAATATTTCCAACAGGAAGTGTTTTATATAGTATAAGGTAATCATATATT
TTCAAGACAAGATCAAACACAAAGCTTTTTATTTAGGATTTCCTTGACAT
TAGCTTGTCCAATGGATCTGAAGCTATATCCTTTAGATCGTCAAGTCTGT
GAGATGAGAATAGCTAGTTGTAAGTATTTATTTAATAAATAATTGAACAT
TTTGATCTAAATCTCTTTGAAAATCATTTTAGATGGATGGACAACGGATG
ACTTAATCTATAGATGGAAAAGCAAGGATCCAGTGCAATTCGTTCAGGAT
TTAAATCTTCCTCGATTCAAACTCGAGAGCTTTAGTACATCGTATTGTAA
TTCAAAAACTAACACAGGTTCAGTTATCCTCTATACCGAATTTCCTATCG
TTAAATTAGTTTTTTTTAATTCAGGGGAGTACAGCTGTTTGAAAATCAAT
CTAGTTTTCAAAAGAGAATTTTCCTACTATCTACTGACCATTTATGTACC
TTCCTGTATGCTTGTTATCATTTCATGGGTGAGTTTCTGGTTAGACTCGA
AATCGGTTCCTGCACGGGTAGCTTTAGGTGTAACAACACTTCTTACTATG
TCTACTCAAACAGCTGGTGTAAATAGATCACTACCTCCAGTAGCTTACAC
AAAAGCAATAGATGTGTGGAGTGGTGCATGTGTTATTTTTGTATTTAGTG
CCTTATTAGAATTTGCATTTGTTAACTATGCTTCACGACATGATCGAAGA
AAGGGAAGGAAATCTAGATCTGCAATGAATTATAACATGGATGACGATGA
AATAGATTATGATCAAGGTCTTGATGTAAGTTCGATTTCTATAAAATTGT
GAGGGAAAAAAAGATCAGAGGATAATTAATTTACAAATATAGAGAACATA
CGTAAATATATATATTATTAAGACAATAAAAAGAAATCTATAGTTAATTA
TTCCCTTTAAGGAATAATTTTTGAATATAATACTTATATTTATTTCAGTG
CACCTCACGAATTCGTTCTCATTATGGCAAGTTTGAGTAATAAATAATAC
ATATAGGTATATTATTTAACAGTGTCTTTTTATAAATAGGAAAACGAGGA
TCCTTTAACTACGGAGAGAACGGTAATATCCTTCTGAGCTATATTGCTGG
AGAGGGCGTGACGACGACTAAAAAAAAGTCCTGGCTTGCTGAAAGATTTC
CAAGGAGATCAAAAAGAATTGATGTAGTAGCTCGTATTTTATTTCCGGGC
ATATTTGCCATCTTTAATTTTAGCTATTGGTTGTATTATTTGTCCGCAGA
ACATGAATCAAGGATTTACAAATAATAGTTGATAAACTGGATGAATTATA
ATTGCAAACTTTTTTTCTCAAGATTTGAAAAGTACCAACACAATAAATAT
ATGATGGATCCATCCATCTTGTGTGTATACCAAGAAGTTTGTTTTATTTT
AAGAGAGTTCTATGAAATCATCATTTTAGCTTTGTTCAGACAATCCTGGC
AGAGCCTCCAAAGGGATTTGTATTTGCACAATTGGTGGATGATTGTTAAT
GTTTTGAGATAAATTTGTTGTCACGATTGAATGAGGATTAGAATTTTGCG
AAGCATTAAAAACTGGTTCGTGAATAGCTTTAATATGTTTTTGAAGGTTT
CCCTTTTCGGCAAACTCCTTGCCACAGAAAGCACAGCGAAAATCCTTCTT
CCCGTGATGAACGGCTTTTACGTGTCTGAAAAAAATAAAATTTGATAAGA
TTAGAAAATATATGATTATATGATGAGGCTATCCATATTATAATGAGATG
TATGCCTTCTTTGGCATACCAGAAATAAGAATTATAATTTTTTTTCTAAT
CTTTATATGTATGGATAGACAAGGGGAACAATGCCATTGACAAATTAGAA
TACATGACTTAGTGTTTGATTGGACACATTTTTTATTTTTTTTGCTGTTT
CATAAGATCTAAAACCTCTTTTTGCCTTTTAAATGATATACTTTAGTGAA
CATATGTAACAAAAGGGTTAAAAATGAGTTATTAGCCACTTTTTC

Add to Basket

Search form