EMLSAT00000009936, EMLSAT00000009936-705783 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009936
Unique NameEMLSAT00000009936-705783
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
R F158 female
  1. PreAdult2
 Normal
no visible phenotype 		21.08.2014 - 15:28
30.09.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s649supercontigLSalAtl2s649:15837..16652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009936 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009936EMLSAG00000009936-692702Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044206EMLSAE00000044206-753134Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769245auto769245Lepeophtheirus salmonispolypeptide
EMLSAP00000009936EMLSAP00000009936Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009936

>EMLSAP00000009936 ID=EMLSAP00000009936|Name=EMLSAP00000009936|organism=Lepeophtheirus salmonis|type=polypeptide|length=272bp
MNKLHCIIFIFVGLTSPVTSLKYLYGPDSEGKASIVDLNPGKPVSSCSLN
LPNFPIPDLKCTSTTFIEGKLTVCGGSRSGFTSSHCFRLENNAWVKFPSL
PEPRTCATSMWINNGTQWWLTGGSGPHSRSVSSGIVYDVSKGAWETGPKI
PIVSYGHCLVPLKDDRVXLLGGWRKIPIIKPIYNKDVYIFENGEWVKQEG
SLNRRFKRFGFSQTCARLKNGGVMILGGKPNGKNHVEVWNSEFGFWSVED
ETMGLPLEHIWYPSSALDEAGN
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mRNA from alignment at LSalAtl2s649:15837..16652-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009936-705783 ID=EMLSAT00000009936-705783|Name=EMLSAT00000009936|organism=Lepeophtheirus salmonis|type=mRNA|length=816bp|location=Sequence derived from alignment at LSalAtl2s649:15837..16652- (Lepeophtheirus salmonis)
ATGAATAAGCTACATTGTATAATCTTCATTTTTGTGGGCCTAACATCCCC
AGTAACATCTCTCAAATATCTATATGGCCCGGACTCGGAAGGAAAGGCTT
CCATCGTGGATCTCAACCCAGGAAAACCCGTCTCATCTTGCTCCCTAAAC
TTACCAAATTTTCCCATTCCAGACCTTAAATGTACCTCTACAACGTTCAT
TGAAGGAAAACTCACAGTTTGTGGTGGGTCCAGATCTGGTTTTACTAGTT
CACATTGCTTTCGATTGGAAAACAATGCCTGGGTTAAATTTCCCTCTCTT
CCTGAGCCCAGGACTTGTGCAACCTCTATGTGGATAAACAATGGTACTCA
ATGGTGGCTTACAGGTGGAAGTGGTCCCCATTCGCGGAGTGTGAGCTCAG
GTATTGTGTATGACGTATCAAAGGGCGCATGGGAAACGGGACCTAAAATC
CCTATCGTATCATATGGTCATTGTCTTGTGCCTCTGAAGGACGACAGAGT
CRTGTTACTTGGAGGGTGGAGAAAAATTCCCATCATTAAGCCAATATATA
ATAAAGATGTTTATATCTTTGAGAATGGAGAATGGGTCAAACAAGAGGGT
AGTTTAAATAGAAGATTCAAGCGCTTTGGATTTAGCCAAACATGTGCTCG
TTTAAAAAATGGAGGTGTCATGATCCTTGGAGGCAAACCTAACGGCAAAA
ATCATGTTGAAGTTTGGAATTCGGAGTTTGGCTTTTGGAGTGTAGAAGAC
GAAACGATGGGTCTACCTCTTGAACATATYTGGTATCCAAGCAGTGCTCT
TGATGAAGCAGGAAAT
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