EMLSAT00000010026, EMLSAT00000010026-705873 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010026
Unique NameEMLSAT00000010026-705873
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s65supercontigLSalAtl2s65:53833..57281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010026 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010026EMLSAG00000010026-692792Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044599EMLSAE00000044599-753527Lepeophtheirus salmonisexon
EMLSAE00000044600EMLSAE00000044600-753528Lepeophtheirus salmonisexon
EMLSAE00000044601EMLSAE00000044601-753529Lepeophtheirus salmonisexon
EMLSAE00000044602EMLSAE00000044602-753530Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770781auto770781Lepeophtheirus salmonispolypeptide
EMLSAP00000010026EMLSAP00000010026Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010026

>EMLSAP00000010026 ID=EMLSAP00000010026|Name=EMLSAP00000010026|organism=Lepeophtheirus salmonis|type=polypeptide|length=1079bp
MYDQEEEFYDQDEDSEVIPNEIWQEACWIVISAYFEEKGLVRQQLDSFDE
FIQMNVQRIVEDFPQIDLQGEPNYSHGEMEAPPRYLLKFEQIYLSKPTHW
EKDGAPSPMMPNEARLRNXXHLLCSTLCGYYQDYRKIPIMLRSTYCLLSG
MTDRDLTELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSVKDSKY
AYKTEIRSCLEHSSRPTSTLWVNMLTRGGQNIKKSAIGQRIVGILPYIKQ
EIPIMIVFRALGFVAXRDILEHIIYDFDDPELMEMVKPSLDEAFVIQEQN
IALNFIGTRGAQPGVTREKRIKYAKEILQKEMLPHVGVSDFCETRKAYFL
GYMVHRLLLAALGRKELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEM
RMYAQKFIDKGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQSRAG
VSQVLNRLTFASTLSHLRRINSPIGRDGKLAKPRQLHNTLWGMICPAETP
EGGAVGLVKNLALMAYVSVGNTPSPILEFLEEWSMENLEEIAPSSISDAT
KIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIINAEVSMIRDIRDREIRIY
TDAGRICRPLLIVEDCRLLMNKQHIEMLKEREYNNYQWQDLVASGVVEYI
DTMEEETTMIATSPESLQPAEDGTFYCQTWTHCEIHPAMILGVCASIIPF
PDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRS
MDYLRFSELPAGINSIVAIATYTGYNQEDSVILNSSAVDRGFFRSVFMRS
YKDSELKRNDQEECFEKPSRDTCQGMRNAIYDKLDDDGIIAPGLRVSGDD
VVIGKTITLQENDDELEGKTQRFTKRDSSTFLRNSETGIVDQVMITLNSD
ANKFVKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGISPD
IIINPHAIPSRMTIGHLIECLQGKLGANKGEVGDATPFNDAVDVQKISKL
LSEYNYQPRGNEVMYNGHTGRKMNAQIFLGPTYYQRLKHMVDDKIHSRAR
GPLQILVRQPMEGRARDGGLRFGEMERGN
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mRNA from alignment at LSalAtl2s65:53833..57281-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010026-705873 ID=EMLSAT00000010026-705873|Name=EMLSAT00000010026|organism=Lepeophtheirus salmonis|type=mRNA|length=3449bp|location=Sequence derived from alignment at LSalAtl2s65:53833..57281- (Lepeophtheirus salmonis)
ATGTACGATCAGGAAGAGGAATTCTATGACCAAGATGAAGACTCTGAAGT GATCCCAAATGAGATTTGGCAGGAAGCCTGTTGGATTGTGATATCTGCCT ACTTTGAGGAAAAGGGTCTTGTTCGGCAACAGTTGGACTCGTTCGATGAA TTCATTCAAATGAATGTCCAAAGGATTGTGGAAGATTTCCCCCAAATTGA CTTGCAAGGAGAGCCCAACTATTCTCATGGAGAGATGGAGGCTCCGCCGC GCTACCTTCTCAAGTTTGAGCAGATCTACCTGAGTAAGCCAACTCATTGG GAGAAGGACGGAGCTCCGAGCCCCATGATGCCCAATGAAGCTCGCTTGCG CAATNNNNCTCACCTACTCTGCTCCACTCTATGTGGATATTACCAAGACT ATCGTGAGAGAGGGAGAAGACCCRGTAGAAACTCAACATCAAAAAACATT CATTGGTAATTCCTCATTACTCCATTGATTTTAAATCTTTCCTCATCCCA TTAGGTAAAATTCCAATCATGTTGCGCTCCACATATTGTCTACTTAGCGG AATGACGGATCGGGATTTGACAGAGCTCAACGAATGTCCTTTGGATCCTG GGGGGTATTTTATTATTAATGGATCAGAGAAAGTACTGATTGCCCAAGAG AAAATGGCAACCAACACTGTGTACGTATTTTCTGTCAAAGACTCCAAATA TGCTTACAAGACGGAAATTAGATCATGCCTTGAACATTCCTCAAGGCCCA CCTCTACTTTATGGGTAAACATGTTGACGCGCGGAGGTCAAAATATTAAA AAATCAGCCATTGGTCAACGTATTGTTGGGATTTTACCTTATATTAAACA AGAAATTCCAATTATGATAGTATTTCGTGCACTCGGTTTTGTGGCAGYTC GAGATATTCTTGAGCACATTATTTATGACTTTGATGATCCCGAACTTATG GAAATGGTCAAACCTTCCTTGGATGAGGCGTTCGTAATCCAGGAACAAAA TATTGCTTTAAATTTTATCGGTACTAGAGGAGCTCAGCCTGGTGTAACAA GGGAAAAGCGTATTAAATACGCTAAAGAAATTTTACAAAAAGAAATGTTG CCGCATGTTGGTGTATCCGATTTTTGTGAAACAAGGAAGGCTTACTTTTT GGGTTATATGGTACATCGGTTATTGTTAGCTGCTCTTGGAAGAAAAGAAC TTGATGATCGGGATCACTATGGAAATAAAAGACTCGATTTAGCTGGTCCG CTTTTAGCATTTCTATTTAGAGGTCTCTTTCGCAACTTAATGAAAGAAAT GAGAATGTATGCTCAAAAGTTTATCGACAAAGGAAAGGATTTTAATCTTG AACTAGCAATTAAGACGAGAATTATATCTGACGGTTTAAAGTACTCTCTT GCTACTGGTAATTGGGGAGATCAAAAGAAAGCCCATCAATCTCGTGCTGG TGTAAGTCAAGTATTGAATAGGTTAACATTTGCGTCTACATTAAGCCATT TAAGAAGAATAAATTCACCTATAGGTAGAGATGGTAAATTGGCCAAACCT AGACAACTTCACAATACCCTTTGGGGGATGATTTGTCCTGCTGAAACTCC TGAAGGTGGTGCTGTAGGTCTTGTGAAAAATCTTGCTTTAATGGCCTATG TATCTGTTGGAAACACTCCATCTCCTATTTTGGAGTTTTTGGAAGAATGG AGTATGGAAAATCTAGAAGAAATTGCACCTAGTTCTATATCAGACGCCAC TAAGATTTTTGTGAATGGATGTTGGGTCGGAATTCATAGAGATCCTGAAC AACTTATGACGACACTCAGAAAATTGAGACGTCAAATGGACATTATTAAT GCAGAAGTGTCAATGATTCGTGATATACGTGATCGGGAAATAAGAATTTA TACAGATGCCGGACGTATTTGTAGGCCTTTACTTATTGTGGAAGACTGTC GTCTTCTTATGAACAAGCAACATATTGAAATGCTTAAAGAAAGAGAGTAT AACAATTATCAATGGCAAGATCTTGTAGCTTCTGGTGTTGTCGAGTATAT TGATACAATGGAAGAAGAAACCACAATGATCGCTACAAGTCCTGAATCAT TACAACCTGCTGAAGACGGTACGTTTTACTGTCAGACATGGACACATTGT GAAATTCATCCTGCTATGATTCTTGGTGTATGTGCATCGATTATTCCCTT TCCTGACCACAATCAATCTCCTAGAAATACCTATCAATCTGCTATGGGTA AACAAGCTATGGGAGTTTATATCACAAATTTCCACGTAAGAATGGATACA TTGGCTCATGTATTGTATTATCCTCAGAAACCCCTTGTAACGACGAGGAG CATGGACTACCTTCGATTTTCTGAACTTCCTGCTGGAATTAATTCTATCG TTGCTATTGCTACTTATACAGGGTACAATCAAGAAGATTCTGTTATCTTA AATTCATCTGCAGTAGATCGAGGATTTTTTAGATCCGTGTTTATGCGTTC ATATAAGGATTCAGAACTTAAAAGAAATGATCAAGAAGAATGCTTTGAAA AACCTTCTCGTGATACGTGCCAAGGCATGAGAAATGCTATATATGACAAG TTAGACGATGATGGAATCATTGCTCCTGGTTTAAGAGTTTCTGGAGATGA TGTTGTAATTGGTAAAACAATTACACTTCAAGAGAATGATGATGAATTGG AGGGAAAGACTCAAAGGTTTACTAAAAGAGACTCTTCAACATTTCTTCGG AATTCAGAAACTGGAATTGTAGATCAGGTTATGATAACATTAAACTCTGA TGCTAATAAATTCGTGAAGATAAGAGTACGTTCAGTGCGTATCCCTCAAA TTGGAGACAAATTTGCTTCAAGACACGGACAAAAGGGTACATGTGGTATT CAGTACAGGTACTATTGCTCTTTTTAAATATTTTAACACATTTTAAAAAC AATTTACTATAGACAAGAGGATATGCCTTTTACATGCGAGGGAATTTCTC CTGATATCATCATTAATCCTCACGCTATTCCGTCTCGTATGACTATTGGG CATTTAATTGAATGCCTTCAAGGTAAACTTGGTGCAAACAAGGGAGAGGT TGGCGACGCAACACCATTCAATGATGCTGTTGATGTACAAAAGATTTCTA AACTCCTAAGTGAATATAATTACCAACCAAGAGGAAATGAGGTACCATGT TAATCTATGTTAAAATTACTTTATTTAACTCTCAATTAAAATTAGGTTAT GTACAATGGTCATACTGGAAGAAAAATGAATGCTCAAATTTTCCTTGGTC CTACCTATTACCAACGTCTAAAACACATGGTCGATGACAAAATTCATAGT CGAGCGAGAGGACCTCTTCAGATTTTAGTGCGTCAACCCATGGAGGGTCG TGCCAGGGACGGTGGACTTCGTTTTGGGGAAATGGAACGAGGTAATTAA
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