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Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
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Gallery Image |
Title |
Gene or target symbol |
Sex/Stage |
Phenotype |
Date |
|
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10390 |
Opsin |
unknown |
No visible phenotype
-Missing- |
31.01.2018 - 10:03
07.02.2018 - 10:14 |
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2839/5061/10390 |
Opsins |
unknown |
No visible phenotype
-Missing- |
31.01.2018 - 10:03
07.02.2018 - 10:14 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s68 | supercontig | LSalAtl2s68:1171681..1173265 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000010390 >EMLSAP00000010390 ID=EMLSAP00000010390|Name=EMLSAP00000010390|organism=Lepeophtheirus salmonis|type=polypeptide|length=380bp
MSHNNIQDGFHKPSAGLYMDTTYYNQYPPGMKXTDGIPEELREVIHAHWD
QYSPANPLIAHFFGIMFFFLWLMNFFGNGLVIFIFSKVKSLRTPTNMFVI
NLAISDLIMMTSMGPPVTINIFLQRYWAWGVFGCKLYGCVGAVCGVVSIL
TMVVIGYDRYNVIVKGFNGTKITAGKALIIIMSIWGYSIAISALALFDIW
GGYTVEGLLFTCSYDYLTDDANNVSYILFTCFFMYLLPMSLVFFFYSSIV
KAVWAHEMTLKQQAKKMNVESLRSNVDTHAESAEIRIAKVAVTNVSLWAG
IWSPYTIVVLMAVMGSKSSIXPLISQLPSFIAKTASCLNPMVYAMSHPKY
REALMREVPCLGIEEETPEEIRTTKEPVKA back to topmRNA from alignment at LSalAtl2s68:1171681..1173265+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000010390-706237 ID=EMLSAT00000010390-706237|Name=EMLSAT00000010390|organism=Lepeophtheirus salmonis|type=mRNA|length=1585bp|location=Sequence derived from alignment at LSalAtl2s68:1171681..1173265+ (Lepeophtheirus salmonis)
CAAGCAACATTGCTAGCGACATCTCGAATAGCAATATCCGTCCTGCAAAG
GCCAGTTATCTATCCTACAACATCCAAATTTTATATTGACAAATCATTTT
ACTTCATTCAAGATGAGCCACAATAATATCCAGGACGGATTTCACAAGCC
CTCTGCAGGCCTCTACATGGACACCACGTACTACAACCAATATCCTCCTG
GTATGAAAAKGACGGACGGTATCCCTGAGGAGCTACGGGAGGTCATTCAT
GCTCATTGGGACCAGTATTCTCCTGCTAATCCACTCATTGCTCATTTCTT
TGGGATTATGTTCTTTTTCCTATGGTTAATGAACTTTTTTGGAAACGGTC
TCGTCATTTTTATCTTTAGTAAAGTGAAGAGTCTGCGAACACCGGTAGGG
TACTCAGTCATTTATATATGTAGAAATGTGACTTAAATATACAAATCGAT
CTTTTTTAGACCAACATGTTTGTCATCAATTTGGCCATTTCTGATCTCAT
TATGATGACCTCAATGGGMCCTCCAGTAACCATTAACATCTTCCTTCAAC
GCTACTGGGCTTGGGGAGTTTTTGGATGTAAACTCTATGGATGTGTTGGT
GCTGTCTGCGGAGTTGTTTCGATCCTAACCATGGTTGTCATTGGTTACGA
TCGATACAACGTCATTGTCAAGGGGTTCAATGGAACTAAAATTACGGCTG
GAAAGGCTCTTATTATCATTATGTCCATATGGGGATATTCCATTGCTATT
TCTGCTTTGGCACTTTTTGACATCTGGGGAGGCTACACTGTGGAGGGCCT
TCTCTTTACCTGTTCCTATGACTACTTGACGGATGATGCAAATAACGTTT
CTTACATCCTTTTTACCTGTTTTTTCATGTACTTGCTCCCAATGTCCCTC
GTATTCTTCTTCTACAGCTCCATCGTCAAGGCTGTATGGGCACATGAAAT
GACACTCAAGCAACAAGCAAAGAAAATGAACGTGGAATCCCTTCGTTCCA
ATGTTGTAAGTTAAACCTTGATCCCTATGATTGAGTTAATTTGTATATTC
ATTTAACAGGATACCCATGCTGAATCCGCCGAGATCCGTATCGCCAAGGT
AGCAGTAACAAACGTATCCCTCTGGGCTGGTATTTGGTCTCCATATACCA
TTGTGGTTCTCATGGCAGTTATGGGKAGTAAATCATCCATCMCTCCTCTC
ATCTCACAGCTACCCTCATTCATTGCAAAAACAGCCTCTTGCCTAAATCC
CATGGTATATGCCATGAGCCATCCCAAATACAGAGAGGCTCTTATGAGAG
AAGTGCCCTGTCTTGGGATTGAAGAAGAAACTCCTGAAGAGATAAGGACA
ACCAAGGAACCTGTCAAGGCTTAATTGTCATAAAAACAGCTATATATATG
TAATGATGTAAACTAAATTTGAATTCTTGAAAAAAGAACAAAAAACTATT
TGTAATATCACTATTATTTTTTCATTCGATTTTGTCTGTTTATTGACGCT
AAATAAACTTATTGGATCATACAATATATTTATATACAATTCTCGTTCAT
CGACTCACTTTCTCACTTTCTTCCTTCCTTCCTTG back to top
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