|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s696 | supercontig | LSalAtl2s696:19871..26409 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000010475 >EMLSAP00000010475 ID=EMLSAP00000010475|Name=EMLSAP00000010475|organism=Lepeophtheirus salmonis|type=polypeptide|length=1732bp
MDSQGRRLVVCDNGTGFVKCGFAGKNLPTHVFPSLVGRPMIRALNNRVQD IEVDDIMVGEKVSKLRSMLEVSYPMENGMVRNWEDMKHLWDYTFGPEKLN ITPSESKILLTEPPMNPKRNREKMVEVMFEEYGFNGXFVXIXAILTLYSQ GLLTGIVVDSGDGVTHICPVCRGFDLPHLTRRLDIAGRDVTRYLIKLLLL RGYSFNHTADFETVRILKEKLCYMGYDIAKEEKLARETTFLVERYTLPDG RXINVGGERFEAPEALFQPHLINVEGPGMAELLFNCIQAADIDMRSDLYK HIVLSGGSTMYPGLPSRLZRELRQLYLERVLKGDTSRLAKYKMRVEVPPT RQNSVFIGGAILANIMKDRDNFWIEKSEYEEKGESVINKLAYKIELRMNH LILGLFGLLLRASVSVWPHSGKGSPPMYGDYEAQRHWQEXTLNLPISSWY APGVKGNELNYWGLXXPPLTAYHSYLNGLFARDVLNQSHYVELEKSRGME SPDHILYMRSTVLFADLIILLPALYYAFKGNLLGFGMLITYPGLILIDNG HFQYNNISLGLFIMAXNCIMRXHDXLGSFLFVCALCYKQMELYHALPFFF YLLGSSLKKESFPMGSLKKLIQIGVIVLGSFALIWFPFIDPQQEFKSLKQ VIFRIFPLARGVFEDKVANFWCSLNLFIKVKTIYSQEELMKICAIVTGFV VLPSNVHLFLRPNLRNFLCSLSVTSLGFFLFSFQVHEKSILLAVIPSLIW IYSTRRDSSNAHLXATWLSVISIFSMLPLLKRDGLTIPTLALTLLYIIIS RAFEKPFYKVLDYTWNDFILRFVYGSSLLFVVGLTFAISFIPPPNKYPDL WPVIISLYSCVHFVLFLSYFYYYQFFGHYESEAIKLKKNLIHPYESAWMK WDIFRAFYRSXLPLVEALFNDLLTTTHTLKLHKDKLNAINSSPSNSEESV RTPCKCKPYEDSSCSSLQIPPNLIEYEKKEEDLKNKIRDLEALNSHALNV VSTLQEESLEKSRKLLKLESNKARVVEKNLPSMKPKMEITCYVKENKRKL PPSSSSSTSSSSNEKKFIHIPKEGTLDIVKMFERKNKILNDLIFKAEEEL LSQKQRISELEDQLKRSSRSVHENYHPKSSSYISKILKDNAALREKIKSL EVNPVKSSSCIKSACHHLHHQHRDEENKENFKSRSQVHKHMEDQHVHIHE LEDQLRSSLDEIRELKLRIAHLQTSKKSFKDKVEILQAQQKVLVDSKDAS KVNELVNFMEKQRNIYRDNVHELLEQLNIEGTANKIIPPSKTFVKEVDVI DGICKECRGKKLRKINSINKEDFSETLDKYKACISSLKKEKNDLISRLEE QTSQIKEKECLITSGKDKIEEWKQRAMSATSLEGITQECQYLQTELRSSR DKVVHLSQELRIKDDHLKTLSDEKDEIICLLDDKTICLEKLKEEKMQMIN DLNQLDSEKVSTDHRVAHAMSQLNAIQLELKTHQREKDEFRGKFEREKTV GIQLRRENTDLRMEIENEIKEKEEAQSRESDIKSHIQKYINEVKRIEELL SLCEKERSELLEQYRRLSSDVSTAESYGRRLETQVVSLEMDLKSRETELN AAETRLRNLEKDLAEMSLSNENYRLQLASFTVRADLAEXELKESRNQQSW INKDLSNVHDLAVTLNSQKVELLNKISEQESEINSMSNEIDKLRSELIFL RKEYHEERAKTKNLEGKLSEYSRPGSSSSTYS back to topmRNA from alignment at LSalAtl2s696:19871..26409- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000010475-706322 ID=EMLSAT00000010475-706322|Name=EMLSAT00000010475|organism=Lepeophtheirus salmonis|type=mRNA|length=6539bp|location=Sequence derived from alignment at LSalAtl2s696:19871..26409- (Lepeophtheirus salmonis) ATGGATTCTCAAGGAAGGAGACTCGTTGTTTGTGACAACGGAACAGGCTT
TGTGAAATGTGGATTTGCAGGAAAAAATCTACCAACACATGTATTTCCAT
CCTTAGTAGGTCGGCCCATGATCCGGGCGCTGAATAATCGAGTCCAAGAC
ATTGAAGTGGATGACATCATGGTGGGGGAAAAGGTTTCAAAGCTCAGATC
CATGCTGGAGGTGAGCTATCCTATGGAGAACGGGATGGTTCGGAATTGGG
AAGATATGGTAAGGATATTTTTGAGTGATCTCTTGTTTCCTGAACACATT
CATTCCCTAATGCTCATCTTTTCTTTTGCTCCTTCATTCAGAAACACCTT
TGGGACTATACCTTTGGACCCGAAAAGCTCAACATCACCCCATCAGAGTC
CAAAATACTCCTTACAGAGCCCCCAATGAATCCTAAACGCAACAGGGAAA
AAATGGTAGAGGTCATGTTTGAAGAATATGGATTCAATGGNTTWTTCGTG
SCCATTMAAGCCATTCTCACTCTGTATTCACAAGGTCTTCTTACTGGCAT
TGTCGTGGACTCTGGAGACGGAGTCACACATATATGCCCCGTCTGCCGTG
GCTTTGATCTTCCTCATTTAACGAGGCGATTGGACATTGCAGGTCGAGAT
GTCACTCGCTATCTAATTAAACTCCTTCTTCTCCGGGGTTACTCTTTTAA
TCACACCGCTGACTTTGAAACTGTGCGCATACTCAAAGAAAAGCTTTGCT
ACATGGGCTACGACATTGCAAAAGAAGAAAAACTAGCACGGGAAACCACT
TTTCTTGTAGAAAGATATACTTTACCGGATGGGAGAGKCATTAATGTGGG
GGGKGAGCGGTTTGAGGCGCCAGAGGCACTTTTTCAACCCCATTTAATTA
ATGTTGAAGGGCCAGGCATGGCTGAACTCCTCTTTAATTGTATTCAAGCT
GCGGATATTGATATGAGATCCGACCTTTATAAGCATATTGTTTTGAGCGG
TGGCTCCACCATGTATCCCGGTCTTCCTTCTCGGCTCSAGAGAGAACTTA
GACAACTCTATCTTGAGCGTGTTCTGAAAGGAGACACATCTCGACTTGCA
AAGTATAAAATGCGTGTAGAAGTTCCTCCAACCAGGCAAAACTCCGTGTT
CATTGGCGGKGCCATTCTTGCGAATATCATGAAGGATAGGGATAACTTTT
GGATTGAAAAGTCCGAGTATGAGGAGAAGGGAGAGTCTGTTATAAATAAG
TTAGCATACAAAATCGGTTAGTCAAATATTCGAGTTTCCCATGGAATGGA
ATTCAGCATTTATCAATTCTTTCTACTCTTTTTAATCCTTATCTAAATAA
AACATATATTTCTACCTATAATTATAATAATTATTATTATTATTTATGTA
CGTTTTGGAATTTTAATCTATTACTAGTAATATTTATTCAATGCCTGTTG
TGTTAATCAAATCTACATTCCGTAGAAAAAAACTATAATGAATAATATAC
TCTTGTACAAAATATTTTATCATAGAATATTGCTTTCTGAAAAAGCTTCT
GTTCATGTCATTCCGTTTTATTTGTAAAAAAAAAAGCAAAAAAAAACACC
TCAAATAAAACTGATAATTACCTTAATTAATTATAATTATATCAATATAT
ATATTCATGTATGTATGAACATCGTGTATTATTAGTAATTATTACTGCAA
CATATTGGTAAAAAAGGGATAGGGGCTTGTTGATGAAAGCAAGTACATAA
GAAATTGTCACATGAGAAATAAATGTCTGGATCGATATCCTTAAATACCT
CTTTATAATATGAAGCTCGAGGATCTGCTACATCCCTGAAGCAGCATCTT
GTAATTATAAAAGTCTACCTAAACTTAATTGATAGTCAAGAATACGTGGA
TTGATAATTTACTATTTATGTTGAATSAAAATCTCTGGGCCCTAATAATG
AAAACGTCATCTTGAACCGCTCACGCAACCTATCAAAACGTAAACATTAA
TGTTATATGAACGTCTCCAATTTACTTGTTGACAATTGTAGAATTAAGGA
TGAATCATTTAATACTGGGACTATTTGGACTCCTTCTTCGGGCCAGTGTC
TCAGTGTGGCCTCACTCGGGTAAAGGAAGTCCTCCTATGTATGGTGACTA
TGAGGCTCAGCGTCATTGGCAGGAGGKAACTCTTAATCTGCCAATATCTT
CCTGGTACGCTCCTGGAGTAAAAGGAAATGAGTTAAATTACTGGGGTCTT
GMCTMCCCGCCCCTAACAGCATATCATAGCTATTTAAATGGATTATTTGC
GAGGGACGTTCTTAATCAGTCTCATTATGTTGAGCTTGGTACGTATAATA
TCAAGACTATGAATGAATATGTCAAAATCTTGATCATTTCTTTGAATTTC
CATTACAGAAAAATCTCGAGGGATGGAATCTCCGGATCATATCCTATATA
TGAGATCCACAGTTCTCTTTGCGGATCTCATTATTCTTCTTCCTGCTCTT
TACTATGCTTTTAAAGGCAATCTACTTGGTTTTGGCATGCTCATAACATA
TCCTGGTTTGATTCTCATTGACAATGGACACTTTCAGTACAATAACATAT
CCTTAGGACTCTTTATTATGGCTGKTAATTGTATTATGAGGKCCCATGAC
TTKCTTGGATCCTTTTTGTTTGTGTGTGCTTTATGTTATAAGCAAATGGA
GTTATACCATGCTCTTCCATTCTTCTTTTATTTATTGGGATCATCCCTCA
AGAAAGAAAGCTTTCCTATGGGCTCTTTGAAAAAGCTTATTCAAATTGGA
GTGATCGTTCTTGGATCATTCGCTCTCATATGGTTTCCGTTTATTGACCC
TCAACAGGAGTTTAAATCTCTCAAACAAGTCATTTTTCGTATATTCCCGC
TCGCTCGAGGGGTTTTCGAAGATAAAGTAGCAAACTTTTGGTGCTCATTG
AATCTCTTTATCAAAGTCAAAACTATTTATAGTCAAGAAGAATTAATGAA
GATTTGTGCCATCGTCACTGGATTTGTTGTTTTACCCTCTAATGTTCACT
TATTTTTGAGACCAAATTTGAGGAACTTTTTATGTTCTTTGAGCGTCACG
TCCCTTGGATTCTTTTTATTCTCTTTCCAAGTTCATGAAAAGAGTATTTT
ATTAGCAGTCATTCCGAGTCTGATATGGATTTACTCAACTCGGCGTGACT
CCTCAAACGCACATCTCMTTGCTACTTGGTTATCTGTGATATCTATTTTT
TCAATGCTTCCACTTCTTAAAAGAGATGGTTTAACCATTCCAACTCTGGC
TCTTACTTTACTGTATATAATCATCTCTCGGGCATTCGAAAAACCTTTTT
ATAAAGTATTAGACTATACCTGGAATGATTTTATTTTGAGGTTTGTTTAT
GGATCGTCGTTATTGTTCGTGGTTGGACTTACTTTTGCTATATCTTTCAT
TCCACCTCCAAACAAGTATCCAGATCTTTGGCCTGTGATTATTTCATTAT
ATTCATGCGTACATTTTGTGTTGTTTTTATCATATTTTTATTATTATCAA
TTTTTTGGACACTATGAGAGTGAAGCAATTAAATTGAAAAAGAATCGTTG
AGTTTTGATTATTTTGATTTGTTATAATTTCATTTTTTTATATATTTCAG
TGAGGTATGACGAKGGCTCAMCCTCCTCCATCKGGRGKTGGCCATAGTTA
TTCATCCCTACGAGAGCGCCTGGATGAAATGGGATATTTTCAGAGCTTTC
TACCGGAGTGNTCTACCCTTAGTTGAAGCATTATTTAATGATCTCCTTAC
GACAACTCATACTTTAAAACTTCACAAAGACAAGCTTAATGCAATAAATT
CTTCTCCGTCCAATAGTGAAGAAAGTGTTCGTACACCCTGTAAGTGTAAA
CCCTACGAAGACTCATCCTGTTCCTCCTTACAAATCCCTCCAAACTTGAT
AGAATATGAAAAAAAAGAAGAGGATCTCAAGAATAAGATAAGAGATTTAG
AGGCCTTGAATAGTCATGCCTTGAATGTTGTCTCTACTCTTCAAGAAGAG
TCATTGGAAAAATCAAGAAAACTATTAAAGTTGGAATCAAATAAGGCGAG
AGTTGTAGAAAAGAATTTGCCGTCTATGAAACCAAAAATGGAAATAACGT
GTTATGTTAAAGAAAATAAACGTAAGTTACCTCCATCGTCTTCTTCTTCT
ACTTCCTCTTCGAGTAACGAGAAGAAATTTATTCATATACCTAAAGAAGG
AACCTTGGATATTGTTAAAATGTTTGAGAGGAAGAATAAAATATTAAATG
ATCTCATTTTCAAAGCAGAAGAAGAGTTACTGTCTCAAAAACAACGTATC
TCTGAATTAGAAGATCAATTGAAGAGATCTAGTCGCAGTGTACATGAAAA
TTATCATCCCAAAAGTTCCTCGTATATTTCTAAGATTCTTAAGGACAATG
CTGCACTCCGAGAGAAAATAAAATCTCTGGAAGTTAATCCCGTAAAAAGT
TCATCATGCATTAAGTCCGCATGTCATCATCTTCATCATCAGCATCGTGA
TGAAGAGAACAAAGAGGTAATTAAAGGCTAATCAATGAAGACAAAGTAAT
AAGAGTCTTCATTTTCAGAATTTCAAATCAAGGAGTCAAGTTCATAAACA
TATGGAGGATCAACACGTTCATATTCATGAACTAGAAGATCAACTTCGAT
CATCCCTTGATGAGATTCGGGAGCTAAAGCTTAGAATTGCTCATTTGCAA
ACTTCAAAGAAAAGTTTTAAAGGTAAATTTAAGAAAGAGACAAAAAAAAA
AAGATTATTTAATGAGATAATGTTAATTATCTTCAAGATAAAGTGGAAAT
ACTCCAAGCACAACAAAAAGTTCTTGTGGACTCTAAAGATGCAAGTAAGG
TGAATGAGCTCGTAAATTTTATGGAGAAACAAAGGAACATTTATAGGGAT
AATGTTCATGAGCTTTTGGAACAATTAAACATTGAAGGAACGGCAAATAA
GATTATTCCACCTTCTAAGACTTTTGTCAAGGAAGTTGATGTTATTGATG
GAATATGTAAGGAATGTCGTGGAAAAAAGCTTCGTAAAATAAACAGTATT
AATAAAGAGGATTTCTCTGAGACTCTGGATAAATATAAAGCCTGTATTTC
AAGTCTCAAAAAAGAAAAAAATGATTTGATATCACGTTTAGAAGAGCAAA
CATCACAAATCAAGGAAAAAGAGTGCTTGATTACATCGGGAAAAGTGTGT
ACTAAATTTAATTGTTAATCGTTGGTTACATATTGTTTTTAAAAAAAAAA
ATACTTTCTCTAGGATAAGATCGAGGAATGGAAGCAGCGTGCAATGTCTG
CGACTTCCTTAGAAGGTATAACTCAAGAATGTCAGTATCTTCAAACAGAG
CTGCGTTCCTCTCGAGATAAAGTAGTTCATTTGAGCCAGGAGCTCCGTAT
AAAGGATGATCATTTAAAGACGCTGTCAGATGAAAAAGATGAAATCATAT
GTCTCCTAGATGATAAGACTATATGTTTGGAAAAGTTGAAGGAGGAAAAA
ATGCAAATGATAAATGATTTGAACCAGTTAGACTCTGAAAAAGTATCTAC
GGATCATAGAGTAGCCCATGCCATGTCTCAACTCAATGCAATTCAATTGG
AATTAAAAACGCATCAAAGAGAAAAAGATGAATTTCGAGGGAAATTTGAA
CGAGAAAAAACTGTGGGTATTCAGCTACGGCGAGAGAATACGGATTTGAG
AATGGAAATAGAAAATGAAATAAAAGAAAAGGAAGAGGCTCAAAGTCGTG
AGTCTGATATTAAATCTCACATTCAAAAATACATAAATGAAGTAAAGAGA
ATCGAGGAATTACTTTCTCTCTGTGAAAAAGAAAGATCCGAACTATTAGA
GCAATATCGTCGCTTATCATCGGACGTGAGCACTGCCGAGAGCTATGGTA
GAAGGCTTGAAACTCAGGTATGTATCTACGTCAATGTTAGTTTTTTTGTA
ACAAAATTAATTTGTCTTATTATAGGTAGTCTCTTTAGAGATGGACTTAA
AGTCTAGAGAAACAGAGCTTAATGCAGCAGAGACCCGTTTGCGAAATTTA
GAAAAAGATTTGGCGGAAATGAGTTTATCCAATGAGAATTACCGTCTACA
ACTCGCTTCATTCACGGTTAGGGCAGATTTAGCCGAGKCTGAATTAAAAG
AATCAAGGAATCAACAGTCATGGATAAACAAGGATCTATCCAATGTCCAT
GACCTTGCGGTGACACTCAACTCTCAAAAGGTTGTTTTAAACATATATCC
TACATATTTATTTTAGGCTTATTTAATTGCTTGATATTTCTTCTTAGGTT
GAGCTATTAAACAAGATTTCAGAGCAAGAGTCTGAAATCAATTCAATGAG
TAATGAAATAGATAAGCTTCGATCGGAATTGATATTTTTAAGGAAGGAAT
ATCACGAAGAAAGGGCCAAGACAAAGAATCTAGAAGGGAAATTATCCGAG
TATAGTCGTCCTGGTAGTAGTTCCTCCACTTATTCTTAG back to top
|