EMLSAT00000010925, EMLSAT00000010925-706772 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010925
Unique NameEMLSAT00000010925-706772
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: survival, reduced
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AX F418 Trypsin- Dylan female
  1. PreAdult2
 -Missing-
survival, reduced 		07.05.2019 - 09:00
13.06.2019 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s730supercontigLSalAtl2s730:283497..284811 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010925 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010925EMLSAG00000010925-693691Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000048831EMLSAE00000048831-757759Lepeophtheirus salmonisexon
EMLSAE00000048832EMLSAE00000048832-757760Lepeophtheirus salmonisexon
EMLSAE00000048833EMLSAE00000048833-757761Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775808auto775808Lepeophtheirus salmonispolypeptide
EMLSAP00000010925EMLSAP00000010925Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010925

>EMLSAP00000010925 ID=EMLSAP00000010925|Name=EMLSAP00000010925|organism=Lepeophtheirus salmonis|type=polypeptide|length=236bp
MRXKSMRHRFGGRIVGGEEVEPNSIPFQVSFQTTGGFHFCGASVMDKDTI
ITAAHCCDSFFPWEVQVVAGEHDLFSTSGDEQTIDVSDITYHEMFASHGT
NYDVCLLKLKSSLHFNEKVKPIALPEKDQEFIGDVVVSGWGTISSSGPAS
PVLKAVTVQVVSDEDCSDAYYGSIDETMICAAAPGKXSCQGDSGGPLAQD
GTLVGIVSWGYGCAAPGYPGVYGKVSKFIDWIVEHK
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mRNA from alignment at LSalAtl2s730:283497..284811+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010925-706772 ID=EMLSAT00000010925-706772|Name=EMLSAT00000010925|organism=Lepeophtheirus salmonis|type=mRNA|length=1315bp|location=Sequence derived from alignment at LSalAtl2s730:283497..284811+ (Lepeophtheirus salmonis)
CAACTGTGTCCACGGTCTCCCCCAATTTGCAATCTAAAATGGATGATTTT
ATTTTATAATCAAAAACTTTATCATTTTGTGCAAATAAAATAATCAATTG
CNAGKTTCATGAGAGKAAAGTCCATGAGACACAGATTCGGTGGAAGAATC
GTCGGAGGAGAAGAAGTTGAACCTAACTCCATTCCCTTCCAAGTTTCATT
CCAAACTACAGGAGGATTCCACTTCTGTGGTGCTTCTGTCATGGACAAGG
ACACTATCATCACTGCTGCTCATTGCTGYGACAGCTTCTTCCCATGGGAA
GTCCAAGTTGTTGCTGGTGAACACGATCTCTTCTCTACTAGTGGAGATGA
ACAAACGATTGATGTATCTGATATCACATACCACGAGATGTTCGCATCCC
ATGGAACCAACTATGACGTTTGTCTTTTGAAATTGAAGTCCTCCTTGCAC
TTCAACGAGTAAGAACTCTATCATACTATTCCTGTGATAATCGTTAATTT
TTATTTTCTTAATAGGAAAGTCAAGCCTATTGCWCTCCCAGAAAAGGACC
AAGAATTCATCGGTGATGTTGTTGTTTCCGGATGGGGAACTATCTCCTCC
AGTGGTCCAGCTTCTCCAGTTCTTAAAGCTGTTACAGTCCAAGTTGTTTC
TGATGAAGGTGAGACTCATAATCATATTCATATACGATGTTTATGAATTT
ACATAAGATATTTTATATTAGACTGTAGCGATGCCTACTATGGATCTATT
GATGAGACCATGATCTGTGCTGCTGCCCCTGGAAAAGMCTCCTGCCAAGG
CGACTCTGGTGGTCCATTGGCTCAAGACGGAACCCTCGTTGGTATTGTTT
CTTGGGGATATGGTTGTGCTGCTCCTGGATACCCAGGTGTCTACGGCAAG
GTCTCCAAGTTCATTGACTGGATTGTTGAACACAAATAAACATTTTTTGA
TTTCATTTGTCAATGATTTGAAACTATTTGCAAATATAATCATCCATTTT
TCTGTTTATTATTTTCTTCATTTCTTTATTTATAATCTAGGAAAAATTGC
CATTTAGCTGGAGTCACTGGTAATAAGCATTTTATAAGTTTATCCATATT
TTTTTTAATAGGACCATTAAAACTCCATCACCCGTGAATTTTAAAACAAA
AACCAATATCCATTTCTCACAATAGGCCACTTCAAGAAATGGAGCCAGCT
TCTTTTTTTTTTTTTTCAACCTTCTTTATTTGGTTTATATATTATATAGA
ACATACATAATTTAAAATTATAGTTTATACTTAATGGTGGGGGGGTAGCA
TTTTCACTAATATTC
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