EMLSAT00000010949, EMLSAT00000010949-706796 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010949
Unique NameEMLSAT00000010949-706796
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AF F239 (F233+F234) EMLSAG00000010949, EMLSAG00000002881 female
  1. Adult
  2. Adult
 -Missing-
-Missing- 		14.12.2015 - 11:09
25.01.2016 - 10:12
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
ExpH - EMLSAT000000010949 Trypsin both
  1. Copepodid
  2. Copepodid
 -Missing-
no visible phenotype 		13.05.2018 - 09:51
16.05.2018 - 09:54
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s733supercontigLSalAtl2s733:303195..305208 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010949 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010949EMLSAG00000010949-693715Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000048927EMLSAE00000048927-757855Lepeophtheirus salmonisexon
EMLSAE00000048928EMLSAE00000048928-757856Lepeophtheirus salmonisexon
EMLSAE00000048929EMLSAE00000048929-757857Lepeophtheirus salmonisexon
EMLSAE00000048930EMLSAE00000048930-757858Lepeophtheirus salmonisexon
EMLSAE00000048931EMLSAE00000048931-757859Lepeophtheirus salmonisexon
EMLSAE00000048932EMLSAE00000048932-757860Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776101auto776101Lepeophtheirus salmonispolypeptide
EMLSAP00000010949EMLSAP00000010949Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010949

>EMLSAP00000010949 ID=EMLSAP00000010949|Name=EMLSAP00000010949|organism=Lepeophtheirus salmonis|type=polypeptide|length=409bp
MKRTCSSITFICINHRLIYSVKAVVGERMYYSQLFLILLCLGVLETYTLE
ISWKTINNEGEMEKEIAEIDPNASLISSRNTEDCKCGLTQFGLTSCGDVK
RQMNINRIIGGRFANENEIPWSARIVICRSRNECYVCGGTLINHRYVLTA
AHCLKEKGVFVEISRMNVELGVRDARVTSYFTKRVGVESFSIHGEHEEQT
AKNDIALVKLKQYIPFNEGXYHWMNSNYLQGNGLGWGQTSVSDKRGXNVL
KRTRLQVLQNSHQYCINGASLGKPPWIKQMCAYAEGTDSCGGDSGGPXTL
PQNGRCXLVGXVSYGLECALTYHAGVYTRVSEYLFWIKHLAKDGGCFGGG
TEMKPKYCDMRCLWGHVTATYYITNNRHEVKCDQGICYATNSSVNVCEIY
NYPCGHIWN
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mRNA from alignment at LSalAtl2s733:303195..305208+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010949-706796 ID=EMLSAT00000010949-706796|Name=EMLSAT00000010949|organism=Lepeophtheirus salmonis|type=mRNA|length=2014bp|location=Sequence derived from alignment at LSalAtl2s733:303195..305208+ (Lepeophtheirus salmonis)
TTTATGATGTGATACAGAAACAAAGAAAACACCTTTTATTATGAAAAGGA
CATGTTCCTCTATAACTTTTATATGTATAAATCATCGATTGATTTATTCA
GTAAAAGCTGTTGTAGGTGAACGTATGTATTATTCACAGTTGTTCTTAAT
ACTGTTATGCCTGGGAGTCTTGGAGACCTATACCCTAGAAATAAGTTGGA
AAACTATCAATAATGAAGGTGAAATGGAAAAAGAAATTGCTGAAATTGAT
CCCAATGCATCATTAATTTCATCCAGGAACACGGAAGACTGTAGTAATAT
ATTTGCTTATTTAATTTAGACCAATAAAACTCATTTATCCTCTTTATGCG
TCACATATTGGAACTATACGTAATATACATTAGAATCAGAAACAAAAACT
TCTTCATTTCAAAAGTTAGAAAAAAAGTTAATTATTAACAGATGTATCAG
TTGTTAACGAACTTTTATCCAAAATTTTCAATGGTTTATTTCCAATAACA
GTGAATTTATATTCTAGTAAAACCTCTATTTTTTAATAAAAATACAGTCT
CAATGGGCTTTAGAGCTGTTCTAAAAAGCATAAATAGAAGGAATTGAGCT
ATAAATTTGATCAGGTATTTAGAAAGGCACGTACGGCATACAAATTTAAT
TACTTTATCAGAATGTGGTTTGACCCAATTTGGTCTAACATCTTGTGGGG
ATGTGAAGCGTCAAATGAACATTAATCGTATTATTGGTGGACGCTTTGCA
AATGAGAATGAAATCCCTTGGAGTGCTAGAATTGTTATATGCAGATCTAG
AAATGAATGCTATGTGTGTGGTGGAACTTTGATCAATCATAGATATGTTT
TAACTGCTGCACATTGCTTAAAGGAGAAAGGAGTTTTTGTAGAGATTTCA
AGGATGAATGTAAGTGCGTTTGTAACAAAGAAGTTTTTTTTGTATTTTAT
TAAAATGCACATCCCATTTGTTGCTGTGAGTCCGTTAATAATACAGTTAA
TCTGAATTTTTTTATCATTAGGTTGAATTAGGAGTTCGTGATGCTCGAGT
TACTTCCTATTTTACGAAAAGAGTAGGTGTAGAGTCTTTCAGTATTCATG
GCGAGCATGAAGAACAAACAGCTAAAAATGACATTGCTTTAGTGAAGTTA
AAACAATATATTCCATTCAATGAAGGAANTTACCATTGGATGAACAGCAA
CTATTTGCAGGGGAATGGGCTGTGGGTAAGGTTAAAAACGAATTAAAATT
CCCAAATATAAACAATTTTTTCACAAATTTGTTCAGCTAGTGGATGGGGA
CAAACCTCGGTCAGCGATAAAAGAGGGAGMAATGTTTTAAAACGTACAAG
ACTCCAGGTTCTCCAGAACTCTCATCAGTATTGTATTAATGGAGCTTCTC
TTGGGAAACCACCATGGATAAAGCAAATGTGCGCCTATGCTGAAGGAACA
GATTCTTGTGGAGGGGATAGTGGAGGMCCACRCACATTACCTCAAAATGG
GAGATGTGSTCTAGTAGGGYTTGTATCTTATGGGTTGGAATGTGCCCTGA
CTTACCATGCTGGAGTATATACTCGTGTCTCTGAATATTTGTTTTGGATA
AAACATCTAGCAAAAGTAAGTTTTCCACATTATAAATATTAAATGCAACT
AAATTATTTAAAAACAGGATGGAGGCTGTTTCGGTGGAGGGACCGAAATG
AAACCAAAATATTGTGATATGCGCTGTTTGTGGGGACATGTCACTGCAAC
ATACTACAGTAAATACTTGTTATATAAACATTCAATAATTAATTAATTAC
TCACTTTTTCTACTCAATAGTTACTAATAATAGGCATGAAGTTAAGTGCG
ACCAGGGGATTTGCTATGCCACAAATTCAAGTGTCAATGTATGTGAAATT
TATAATTATCCTTGTGGGCATATTTGGAATTAATGCTTCATTAATAAAAG
TGTATATTTTATATACATACTAAGGTATTTCCATAATAAATCATTTTGGT
TCAATAGACAAATC
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