EMLSAT00000010968, EMLSAT00000010968-706815 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010968
Unique NameEMLSAT00000010968-706815
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: no visible phenotype
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AR F249 EMLSAT00000010968 EMLSAG00000010968 female
  1. PreAdult2
 No visible phenotype
no visible phenotype 		16.08.2018 - 09:00
20.09.2018 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s735supercontigLSalAtl2s735:89985..91812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010968 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010968EMLSAG00000010968-693734Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049039EMLSAE00000049039-757967Lepeophtheirus salmonisexon
EMLSAE00000049040EMLSAE00000049040-757968Lepeophtheirus salmonisexon
EMLSAE00000049041EMLSAE00000049041-757969Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771873auto771873Lepeophtheirus salmonispolypeptide
EMLSAP00000010968EMLSAP00000010968Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010968

>EMLSAP00000010968 ID=EMLSAP00000010968|Name=EMLSAP00000010968|organism=Lepeophtheirus salmonis|type=polypeptide|length=320bp
MDLKSGIIALTLFFTLLQFTLGNEVNQRNCPSGYQYAGEDSSNNRIVSSF
NKGFVYYEEVSRSDIYSCYKYIPSKSENDVTYFDAVKGCSDEENHVENKA
RLISFDDDFNEIQRFANILSSYLNGSSSKILTSGLKLPNYSTFVWSSTNE
MYNISEAFIQIQNKTDPKLACLALSINSPHDFTLEAIDCANTNIKTYVCE
VRVQIVTFYAWFVNNSWNLVLLFSISILGIGLCMSGFAYRSSPRFERRVQ
RRPGNVSPGGPNISKIDAPPPYESFVNAQCAHEGLPPKYDSNAQAPSRLE
QIKNKGKDILATVTVFKTRY
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mRNA from alignment at LSalAtl2s735:89985..91812-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010968-706815 ID=EMLSAT00000010968-706815|Name=EMLSAT00000010968|organism=Lepeophtheirus salmonis|type=mRNA|length=1828bp|location=Sequence derived from alignment at LSalAtl2s735:89985..91812- (Lepeophtheirus salmonis)
ATGGACTTAAAGTCAGGAATAATTGCTCTCACTCTATTCTTTACACTACT
TCAATTCACATTAGGGAATGAAGTTAATCAGAGAAGTACGTATACATTGT
TTTCCATAATTTAAAATAACCTTGGTTGATATATATATGAAAATTAAAAT
TTTTAGGTATTACTTAATTTTAGACCTTGTCTTTTTATTAAGAACTTCTA
AGCTGGTCCATGAAGATACGGAAACTTATTTATTACTAGTATGAATCATG
GCCTCTCCAACTTCCCCTATGGTGGTGCCTCTGATTGTACCATACCATTA
ATTATGATGTAATCTTTTTGACTGTTTGAGAAAAAGGACCTTTTTGCATT
TGTCTCTAGTCTCTTTTACATATACATATTAGCCATATTTTTTGTATATA
TAATTTKTCATGATTYAATNTTTATAAAAATGACGAATTCAACTTTCTTT
TTTTTTTTTTTTTTTTTTGTAAGGGATAACGTCATTTAAATGAGATAAAA
AAAATACATACCATGACATAATAATAAATATGTTTTGATTAAACCACAAA
TAATATGTCGATAAGTTACATCATAGAAAACAGTACTTGTTGCTCTATGA
ACTATTTTTTAAAAAATACATGGAACACCGAATACATATACTTCTATGTA
TTGCAATTAATTTCCTTTGTTGGGATATTTTCTTATCTTATCCCACTTAT
AAGTACATAACATCATTGAACATTGATCATTTATTCCTCTATAAATAAGA
AATAAAGTATTGCACCTGTTTATATAACATGAAAACTTTTATAATGATAA
ATATGAGATAATCAATTATTATCTGTTCAAATTCATACGTTTTATTTAAA
TTCCTAGATTGTCCTAGTGGATATCAATATGCTGGAGAAGATTCTTCAAA
TAATAGAATCGTAAGTTCATTTAACAAAGGATTTGTATATTATGAAGAGG
TGAGTAGATCAGATATATACTCGTGCTACAAGTATATCCCCTCCAAATCC
GAAAATGATGTCACTTACTTTGATGCTGTCAAAGGTTGTTCTGATGAAGA
AAATCATGTGGAAAATAAAGCTCGACTCATTAGTTTTGATGATGATTTTA
ATGAAATACAAAGATTTGCGAATATTCTATCTTCTTATTTGAATGGATCT
TCTTCTAAGATCCTCACGTCTGGACTAAAGTTACCAAATTATAGCACATT
TGTTTGGAGCTCTACAAGTAAGTGTCGTCCAACTTTGATTTCATTTATAA
TACATATTATGTATCAAGTTACTGAATCCAAATGATTAAATCTTTAATAT
ACTTATATAGATGAAATGTACAACATCTCTGAGGCTTTCATTCAAATCCA
AAATAAAACTGACCCAAAATTGGCATGTTTGGCCCTGTCCATTAATTCCC
CACATGATTTTACTCTTGAAGCTATTGATTGTGCAAATACGAATATTAAA
ACATACGTCTGTGAAGTGCGCGTTCAAATAGTAACTTTTTACGCCTGGTT
TGTGAATAATAGTTGGAATTTGGTTCTCTTATTTTCAATCAGTATTTTGG
GAATTGGTTTATGTATGTCTGGCTTTGCTTATAGATCCTCACCAAGATTT
GAAAGGCGAGTGCAAAGGAGACCGGGAAATGTTTCACCTGGAGGACCAAA
TATTAGTAAAATTGATGCTCCTCCACCATATGAAAGCTTTGTTAATGCTC
AATGTGCCCATGAAGGACTACCTCCAAAGTACGACTCCAATGCACAAGCA
CCAAGTCGTTTGGAACAAATAAAAAATAAGGGAAAAGATATCCTTGCCAC
TGTTACTGTTTTTAAAACAAGATATTAA
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