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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s784 | supercontig | LSalAtl2s784:181791..188609 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011350 >EMLSAP00000011350 ID=EMLSAP00000011350|Name=EMLSAP00000011350|organism=Lepeophtheirus salmonis|type=polypeptide|length=960bp
MPVYLFIKMNSRCLLLNILFYCLNISQSRSSLIDDRSANRNFRKVLNRQT
FILALEGVWDRAHYSIKPNPLLSIEFGDVHKEFQIYLLEDSFTIEFVLRR
YTDTIWRKKVSIPELAYIKDDNRVENDQLLIIFEQNVETSSLRESILNCK
ACQVKKPECSDIPSPCFHGVKCRNTPDGPVCGECPIGFEGNGHFCERKIC
KTNPCYSGVTCYPKDNAPYFRCGPCPIGYRGNGITCYPSQCEKNPPPCYN
GVDCFNLDNLPYYKCGACPQGLTGNGTWCSDLDECDLADPCDVSVTCYNT
VPGFRCGPCPVGFSGSEGFIGVGLDFASRQRQVCYDVNECAKNNGYCVEN
SLCVNTEGSYYCGPCIRGFVGNQIEGCSNRPGVCPDGTVCDENADCIMPP
TASFYICKCKVGWAGDGKVCGPDRDLDAWPDIDISCSELKCRRDNCLDTP
NSGQEDSDQDGIGDACDEDADNDGIPNTPDNCPLVSNPDQADTEVDGDDK
RGDACDNCPYLPNINQEDTDEDGVGDSCDDDIDNDRVPNENDNCPMIVNS
DQIDSDDDGIGDACDNCPHIKNTDQQDSDEDTFGDICDNNNDADKDGIHD
DIDNCPMEPNSDQLDTDSDGIGDDCDRDADNDGIENEKDNCWIAANPDQK
DSDLDGRGDICDKDTDTDGTPDLFDNCPNNSKIYSTDFRTYQTVVLDPHG
DSQIDPNWVIYNKGAEIVQTMNSDPGLAVGFHRFGGVDFEGTFFVDTEID
DDYVGFIFSYQDNNQFYTVMWKKNTQTYWQXTPFRAVAEPGIQLKLVQSK
TGPGQMMRNAMWHTGNTENQVKLLWKDPRNVGWREKVAYRWLLLHRPKIG
LIRLRIFEGEKMVADSGNIFDDTLKGGRLGVFCFSQEMIIWSDLVYRCND
HVPEVIYNELPERIKTREGTTSRDYMQLLSLAKYFRGGVQSRIYSLFFIF
VMTSPLMEIL back to topmRNA from alignment at LSalAtl2s784:181791..188609+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011350-707197 ID=EMLSAT00000011350-707197|Name=EMLSAT00000011350|organism=Lepeophtheirus salmonis|type=mRNA|length=6819bp|location=Sequence derived from alignment at LSalAtl2s784:181791..188609+ (Lepeophtheirus salmonis)
ATTTTATGGGAGCTATGACGATCATATTTACTTTCTCTATTTCACTTGAA
TCAATATCAATTCATATTAATAATATTTATGATTATCTAATTAACTATAG
CAGTCTTAAAAAATAAGATTAAGAAAATAAAGGAAATTTTACTAATGAGT
TATTAGAGAAAATAAAGTATGTAATGAACTTACACGTATTTAAATCATGG
AGTATAATATTTTAATACTTACTTTGAAATTGTCTTGTGATTTGTGGCTA
ATTTTTTTTTCTTGTAAGTATTCAATATTGGAAACCATTCACCTCCTTTC
TTTACTTTTCCTTTTTGGGTATGTGGGTTGATTAGTGGGCAGGGAATGTC
AACCTGCCCTTAAATTATATTATGCCACACTCACTTATAAGAAATAAGAA
TACAAACTTGTATCATAGAATATGCCTGTATATTTATTCATCAAAATGAA
TTCAAGATGTCTTCTTCTAAATATATTGTTTTATTGTCTGAATATTTCAC
AAAGCAGAAGTTCTCTTATTGATGACCGAAGTGCTAATCGGAACTTTCGC
AAAGTTTTAAATCGACAAACCTTTATCCTAGCTCTTGAAGGTGTTTGGGA
TAGAGCACACTATTCGATAAAACCCAACCCACTTCTTTCTATAGAATTTG
GAGATGTCCATAAGGAATTTCAGGTAAACGATGTATTTTATATTTTAAAT
TTGGTGTTCTTTAGAGAACTATTCAGTTAATCATTTTCAAACATATACAT
AAAAAATAATATTATTTCGAAGAAAATGCATTTGAAGGAGTTGATTATTT
AATTATTATTTGTAGCAATATTCTTTTTTTTTTTTCAATATTTTTACTCT
TAATAGCTTTAAAGAGAAAATTATTATATATTAAACAAATATATAATACA
TATATATATATATTGAATTAAAGTTGAAATAAGGTTAATTATGTCCAATA
AAGGGTTATATATCAAACGTTTTGGATCCAGAGTAAATTTAAATAAACCC
TCAAAAATTATCTTTTAAATATGCACAATTTATCTTATATTAAAATATAT
TTATGCTACTTGTTTCCAGATTTACTTATTAGAAGATTCCTTCACAATTG
AATTCGTGTTAAGACGTTATACAGACACTATTTGGAGAAAAAAGGTTTCA
ATCCCTGAATTGGCTTATATAAAGGATGACAACAGAGTCGAAAATGATCA
GCTGTTAATTATTTTTGAACAAAACGTTAATTCCACAGAGTTACAACTAT
ATTATAGCTGTCATAAAAAACCAACATTTCAATACCTTATGAAGTCCGTG
GATTAGTATCAAAAGAACAATATTCTAAAATAAGACTCCTTTACGATGAG
GATATCGACTTAGAAGTAGGTTACCATATGTTCCCATTCTGATAAAAATG
GTTATTATTAAAAAGCTTTATATATAAATTGCACCTATTAAGTACTATTT
ATTTACTTTTTATTAAAGTAAATATTACTATATATATATATATATTACTT
TTAGATATGTCTATTCAAAGCATCCATAGAATTATTTATCATTTTATTGA
TATAAATTTCAAACATATCAAAACTGTTATTTTTCTCTAATACAGATAAT
ATTATTTTTCATGTAACCAAATCAGGTAATGCATACTTCAAATATTAGCA
CTATTTTAAAAGAAGATTATGCATGTGGTCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGATGAAATGCAGGCACAGCAACCTTCATCGAGAAAATATGGATA
MWCTCSAAAWAAAARWCGTGAAAMTAAWAGTTTTAGGTCAAAAWCTCSTG
GAGATATTYCTATTTCTAACTTCGATGAAGCGGATAAGTTACTAGTGGTT
ACATTACGTGAGCTTATAGAAGCCTTAAATAGGTTAAAGGAWCAAATCAA
TCTTCAAAAGGTAGAAACATCTTCCCTTAGAGAATCGATTCTAAATTGTA
AAGCCTGTCAAGTAAAGAAACCAGAGTGTTCAGACATTCCTTCTCCTTGC
TTTCATGGAGTAAAGTGTCGAAATACTCCCGATGGTCCTGTTTGTGGGGA
ATGCCCTATTGGATTTGAAGGCAACGGTCATTTTTGTGAGAGAAAAATTT
GTAAAACAAACCCATGCTACTCTGGAGTTACATGCTACCCCAAAGATAAT
GCACCATACTTCAGATGTGGTCCATGTCCAATTGGTTATCGCGGAAATGG
TATTACTTGTTATCCATCTCAATGTGAAAAAAATCCTCCTCCTTGCTATA
ACGGTGTAGATTGTTTTAATTTGGATAATCTTCCTTATTACAAATGTGGT
GCATGTCCACAAGGGTTAACAGGAAATGGTACTTGGTGTAGTGATCTTGA
TGAATGTGACCTAGCTGATCCATGTGATGTCTCAGTTACTTGTTATAATA
CAGTACCCGGCTTCCGATGTGGACCATGTCCAGTTGGATTTTCAGGTTCA
GAAGGTTTTATTGGAGTAGGACTTGATTTTGCATCCCGCCAACGCCAAGT
TTGCTATGATGTTAATGAATGTGCAAAAAATAATGGATATTGTGTTGAAA
ATTCTCTTTGTGTAAATACAGAAGGATCATATTATTGTGGACCATGTATT
CGAGGTTTTGTTGGCAATCAAATTGAAGGATGTAGTAATCGTCCTGGAGT
ATGTCCAGATGGAACAGTTTGTGATGAAAATGCAGATTGTATAATGCCAC
CGACTGCTTCTTTCTATATTTGCAAATGTAAAGTAGGTTGGGCAGGGGAT
GGAAAGGTTTGTGGTCCAGATCGGGACCTAGATGCCTGGCCTGATATAGA
TATTTCATGTTCTGAGTTAAAATGCCGAAGGGATAATTGCTTGGATACCC
CCAACTCAGGACAGGAAGATTCAGATCAAGATGGTATTGGAGATGCATGT
GATGAAGATGCTGATAATGATGGTATCCCAAACACCCCTGATAACTGCCC
TCTTGTGAGTAACCCAGATCAAGCTGATACAGAAGTTGATGGTGATGATA
AGCGAGGAGATGCTTGCGATAATTGTCCATATCTGCCTAATATAAACCAA
GAAGACACAGATGAGGATGGCGTTGGAGACTCATGTGATGATGATATAGA
TAATGATAGAGTACCTAATGAAAATGATAACTGTCCTATGATAGTAAATT
CAGATCAAATCGACTCTGATGATGATGGTATTGGAGATGCATGTGATAAT
TGCCCACATATAAAAAATACAGATCAGCAAGACTCAGATGAAGACACATT
TGGGGATATCTGTGATAATAACAATGATGCTGATAAGGATGGTATTCACG
ATGATATAGACAACTGCCCAATGGAACCTAATTCAGATCAATTGGATACA
GACTCTGATGGAATTGGTGACGATTGTGATCGAGATGCAGATAATGATGG
AATAGAGAATGAAAAAGATAATTGCTGGATTGCAGCCAACCCTGACCAAA
AAGATTCTGACTTAGATGGTCGAGGAGATATTTGTGATAAAGACACTGAT
ACTGATGGAACCCCAGATTTATTTGATAATTGTCCAAATAATTCAAAAAT
ATACTCTACTGATTTTAGAACTTATCAAACTGTGGTGTTAGATCCTCATG
GTGATTCACAAATTGATCCTAATTGGGTCATATATAATAAAGGAGCAGAA
ATCGTACAAACAATGAATTCTGATCCTGGTCTGGCTGTTGGTTTTCATCG
CTTTGGTGGAGTTGATTTTGAAGGAACTTTCTTTGTGGATACAGAGATAG
ATGATGACTATGTTGGTTTTATTTTTTCTTATCAAGACAATAATCAATTT
TACACTGTAATGTGGAAAAAAAATACTCAAACATATTGGCAGGSAACGCC
GTTCCGTGCCGTTGCTGAACCAGGTATACAGCTCAAACTAGTTCAGTCAA
AAACTGGACCAGGACAGATGATGAGAAATGCGATGTGGCACACAGGAAAC
ACAGAAAATCAGGTAAAATTACTTTGGAAAGATCCTAGAAATGTAGGATG
GAGGGAAAAGGTTGCTTATCGATGGCTACTTCTTCATCGCCCCAAAATTG
GTTTGATACGTTTACGAATATTTGAGGGAGAAAAAATGGTAGCTGATTCT
GGAAATATCTTTGATGATACACTAAAAGGGGGACGCTTAGGTAATGAAAA
ATCGTTATACTTATGTAGTTTTAGTTTATACAGTTTGTTATATCCATTTA
TTACTCAAATATCATGATTATAGGTGTGTTTTGTTTCTCACAAGAAATGA
TTATATGGTCAGATCTTGTTTATCGATGCAATGATCATGTTCCTGAAGTT
ATTTATAATGAGCTCCCGGAAAGAATAAAGACCCGTGTTCATATTGACAA
ATCAAAACCAACGTCTGCTTAACTCTTCTTTTACTTCTTCAATATAAATA
ACAATAATAACAATTGTCAGTAAATTAATACCTATACATACTATTAAATA
AATAACATTTTTATGAAGTATTTAATTTTTATTTGCAAATCTATCTATTT
ATATGAATATATTTTAGATGGCATAAGTTACAAGTCTGAGATACATTGAA
AATAAAGGTAGGTATAGTAATGTAGATTTTTTCATTCAAATCTTATTTGT
TCTTATTATTACTAGGAGGGTACGACATCTAGAGACTACATGCAGCTGCT
ATCCCTTGCAAAATACTTTCGTGGGGGAGTACAGTCCCGGTATGTGCATT
TAAATATAAAAAATTTGGGGTAACTGTCATTTGTGACATCTACACCAGAT
CAGCCCTCCTTGAAAGTATGCTTGATAATTGTAAATTCTATTTGTTTTAA
AAGAGACATGCCCATCCCCCCCATCCCCTATGTTGCAGGTAGTTTTTTAT
GTTACAAGATATCTGATAATATAACAAATAATTAATTCAAAATTATTTTG
TTTGTACCTAAGATTTAAAAATTTTGTGTTGAGATATTTCAAATCATCGA
AAATAAATGTTTGTGATGAGGGTGATAATTTCTTTTGATTTAACGAATTG
TAGATATTTATAAATTAGATACAAATTTAGTGATATAAATACAATACTGC
TTAAGTTTTGTAATTAAGATTTATAATCCTATATTAATAACATATTAATA
TTTCAACCTAAAATGAATCTAATTTTGAAGCAAGGAGTAATTACTAGGGC
TGTCAAAAAGTATTTATATCATAAGATATTGCAATCCATATCAATACATA
TAGTTATTGATATTAATGAGAATATTGACACAGATTAAAACCGGTTATTA
CAAGGAATTATTGAAAATAAGTGAAAACATAGAGATTTTGATGTGATGTC
TTTATTTATGAACCAACTAACTCTGATGACGCTAATTACTAATTAGTAAT
ATCAACATTATATGAAAATAGACTCCGATTGTTTTTATCATGGAAAATCT
TAATGCTAATTATTTGTGTCAATGATATACTAGTTGAGTTTAGGGTTTAC
AAATCGTGGGTCTCAGGAAGCCATAGCTCCCAAATAGGGTAATTAATAAT
CATTCATTTCACTTAGGATCTACTCTTTGTTTTTTATATTCGTGATGACA
TCCCCCTTGATGGAAATTCTATAGACGCCTCTCCATTGACTGGCATTAAA
GATCCAAAAGAAAGACTCAAACTTTACCAGATGTAAAAAGCGAAGAACCA
ATATTTATGAAATGACCCAAGAAGAATTCAGTATAACAAGAGATCATTAA
ATAACTTATATCTATTGGAATATCATTTATTTTAAAGTTCCATGGGCTAA
TTTTGTAAATTGTTGGAAGTTATCAGCTCAATTAAAAACAAAAGGGTGTT
TTTTTATTGATGTCTTGATAAATATACATGAATTATTTACAGATATTCAT
TTTTAAGCACTAAAGAGACAATATGTAAATCCCTTCATTTATCATGTATG
ATAGTTCCCTTTTTATGTGTACTGAATACCTTTATATCCGTGATGAAGGC
TGAAAGGATTAAGAACGAGGAATGTTTTTCATGTAACGAAGGTTCTTCAA
TATGCGACAAACTATTCATCTATAGAAATTTTAATACATCTCCAGGAATG
CAGACAAATAGTAAAGGGAAAAAGTGACGCATCCAATCATTACCAATCTT
TCTACTCAGCAATATTATATATTAAGTGTAAATTATATCAAACCCTTTGT
ACTACTTTTTACAACAGTGGATATGTTCTTGTTAGACATCAGTTTGTCAT
TGTTCATTAGCTCAGTGCATCGAAACTTGGAATCGGTTAAATGAAAACTA
GCATCGTAAAGAATTATATAAAGGATTGGAATCAGAAGCATGATAAATTA
GAATTAAAAAAGAAACCTTAGAAGTGTCTCACACTTTAAAAGATTCTGCA
CCTTTCGCAATAGAATTGGATTTTCATTTAGTTATAAGATTATAGGTAAT
TATTCGAATAAACGACTTTTTATTTGCGAATCTATCTCATATATTCATGA
ATAATATTCGTTTGCCAAGAGGAATCCATATATTCGTCTCCTTGCCTCTA
AATTCGTTAAGGACTCATAAATGAAGTTCGACTGGCTCTCATCCTCATTT
AATATTTTAGATGATGGCCAAAAAGAAGTTCAACCCTCGGAATATGTTTT
TTAGTGACCAAAGACTGACTTACGAAGAAATGGAAGAGTTCATATCGTTT
TATATCGTGATCTTTCAATTCTCACATGAATGAATATAATATAGACTCTA
ATCCATTAATCAATTATTTATTTACCTAAGAGTGATATTGATGGATGATT
AACTGAAGGAATGTTCCAT back to top
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