EMLSAT00000011499, EMLSAT00000011499-707346 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011499
Unique NameEMLSAT00000011499-707346
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s796supercontigLSalAtl2s796:74576..77471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011499 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011499EMLSAG00000011499-694265Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051419EMLSAE00000051419-760347Lepeophtheirus salmonisexon
EMLSAE00000051420EMLSAE00000051420-760348Lepeophtheirus salmonisexon
EMLSAE00000051421EMLSAE00000051421-760349Lepeophtheirus salmonisexon
EMLSAE00000051422EMLSAE00000051422-760350Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771440auto771440Lepeophtheirus salmonispolypeptide
EMLSAP00000011499EMLSAP00000011499Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011499

>EMLSAP00000011499 ID=EMLSAP00000011499|Name=EMLSAP00000011499|organism=Lepeophtheirus salmonis|type=polypeptide|length=689bp
MTEKKRNHLHWTSLLLCLFALNLSHGLSNESITTTESXPSRSTVKPLPIA
IRAPEPDDAEAKMKKPXKTKNLLCPSYKVHRRGDSKFSCYANFTVNSCGH
NMVISMEAWTTSSQLYEPFLNVGINCSLEINSTTHLFPAPNPVFEILGTN
DTDGTKDSSPKFSAIIQNSSISCRWSKWSSWSHCSVSCGNSPGRRXRSRS
QNGSRLCSGTENESKKCIVNRCAQDCKKKVLLPHLYGGKPCIGDDLETKR
CSGADCPVDGDWSQWSHXGXCQSKCGVGNRTRTRACDNPPPENGGRPCEE
NNSNVRDELIRHPRIAEKSEDLPIQTQEEVQSCKLKDCDPIDGRWSKWSR
WSTCSVNCGRGKIIRTRAYKGQGPIPHSVDITSVLFQRLGGSCLDKPPYV
HGFIGPFIKEGITINRPDRYLRVGEIAYYMCNHGKVIDPISNQRGFFVAC
RESNGYLVKMYRRKDSDPEWPICKDPRYCLDPAPKYQGYTPPIPRRHALV
NTQIKYHCIKRPNVTYSLSCFPDGRYKLPNEVPLNTCEQNYNPPGSSXQX
PALSSQSTRNGNILRFMXANTVSPSYEGYLLSLDDASDNEDKDSVLNQTF
GWIQSPGYPGVTAANYSQFKFTVLTHGYYVRIGIEDAEVQYDQMDLDIDF
KDQQKQLRKGESYIIKRQFVIXPAYGVFKFRITFQFIAP
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mRNA from alignment at LSalAtl2s796:74576..77471+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011499-707346 ID=EMLSAT00000011499-707346|Name=EMLSAT00000011499|organism=Lepeophtheirus salmonis|type=mRNA|length=2896bp|location=Sequence derived from alignment at LSalAtl2s796:74576..77471+ (Lepeophtheirus salmonis)
ATGACTGAAAAGAAGCGCAATCACCTTCATTGGACATCCTTGCTATTATG
CCTTTTTGCTCTTAATTTAAGTCATGGACTGAGTAATGAAAGTATAACGA
CAACAGAGAGTMCGCCTTCCAGATCTACTGTTAAGCCGTTACCCATTGCC
ATACGTGCTCCTGAGCCAGATGATGCTGAAGCAAAGGTCATCATCTCCTC
CAAATCCTTGCTAAAGGAGCAGGATGAAAATCAAAAGAATGTTAAAAAGG
AAGAGTCTTGCGACTCTCTTGCAGATAAATTTCTGTCTCTAAGGAACTTG
AACACGATCCAGATACCAAGGATGGGGAATATTACTTGGGGAAACGAGGA
ACTGYCCGCCACAAAATGCGTAAGAATTCATATGTTTTTAAGTAGTGTAT
TATCGGTACTTATTTAGAACGGAAGACTACATTCCCATCTATTCTAGTCT
CTGTTCAGTCCAGTGAAATCCTACATATCAGTCCTAAAACTGATAACGTT
TGATTCTCGATGATAATAAACACCCTCTTTTAAATCAGTTCTAAAAGCAA
GTCCCAAGGACTAGAAGGCCCGATCTTAAGACTGGAAGGGACTCAATAAA
TAAGGACCAATACATCACTATTTTTATGTGTACACACTGATTCTAACTTT
TCTTGACTCATTATATTCTTTGTTTAGTTTTCAGAGTTTGTCATCTTTGC
TCAAGATGAAAAAACCNNNNAAAACGAAGAACCTTTTGTGCCCAAGCTAC
AAAGTCCATCGAAGAGGAGATTCAAAGTTTTCCTGCTACGCTAATTTTAC
AGTTAACTCATGTGGACATAATATGGTCATTTCTATGGAGGCCTGGACAA
CCTCGAGTCAATTATATGAACCTTTCCTCAATGTTGGTATCAATTGCTCG
CTAGAAATAAACTCAACGACTCATTTGTTCCCTGCTCCAAATCCAGTTTT
TGAGATCTTGGGTACAAATGATACAGATGGGACTAAAGACTCTTCTCCTA
AATTCTCAGCAATAATACAAAATTCTTCCATTTCCTGTCGATGGAGTAAA
TGGAGCTCTTGGTCACACTGTTCTGTCTCTTGTGGTAATTCTCCAGGGAG
ACGCAGKCGGAGCCGCTCCCAAAATGGCTCTCGATTATGCAGTGGAACAG
AGAATGAGAGCAAGAAATGTATCGTTAATAGATGTGCTCAGGACTGTGTT
TGGAGTGAATGGAGTGATTGGAGCCCCTGCTCTGTATCTTGCGGCACTTC
TGGAAGATCATCTAGAAAAAGAAAGTCCTYCTGCCACATCTTTATGGAGG
AAAACCCTGCATCGGCGATGATCTTGAAACAAAGAGATGTAGCGGAGCCG
ACTGTCCTGTAGATGGAGATTGGTCCCAGTGGAGTCACKGGGGCTMCTGC
CAGTCTAAATGTGGTGTTGGTAATCGAACAAGAACAAGGGCTTGTGATAA
TCCTCCTCCTGAAAATGGGGGTCGACCTTGTGAAGAAAACAACTCAAATG
TGAGGGATGAATTGATTCGGCATCCAAGGATTGCCGAAAAAAGTGAGGAC
CTTCCTATACAAACCCAAGAAGAGGTTCAGTCTTGTAAATTAAAAGATTG
CGATCCAATAGATGGACGATGGAGTAAATGGAGTCGCTGGAGTACTTGTT
CTGTCAATTGTGGACGAGGGAAAATAATTCGGACAAGAGCATGTAATTCG
CCAACTCCTGCTCATGGGGGACAGAAATGTTATGGACAACCTACACAAAC
ACGACCCTGTTTTCTCAGAAAATGTGCTGAGGACAATGACAATGATAGTT
TTAGAGGGATTCACACAGTTTCAACAACCCCCAAAAACTTTTTGTTACTA
CAACATCACCCAATTATAGAAGCAACTTGATTTCCTCACGATTGACACAT
TTTGGATCTCGAGATGAGTCAACTTCTTCAGATAAAGGACAGGGACCCAT
TCCTCACTCAGTGGATATAACATCAGTATTGTTTCAACGACTAGGAGGAT
CATGTTTGGATAAGCCACCTTATGTCCATGGATTCATTGGACCCTTTATA
AAAGAAGGCATAACGATTAATCGGCCTGACCGGTATCTTCGAGTCGGAGA
AATAGCATACTACATGTGTAACCATGGAAAAGTAATCGATCCCATTTCTA
ATCAGCGTGGTTTCTTTGTAGCATGTCGAGAGAGCAATGGTTATTTGGTG
AAGATGTATCGGAGAAAGGATAGTGATCCTGAATGGCCAATCTGTAAAGA
TCCCCGATATTGTCTAGACCCTGCACCAAAATATCAAGGCTATACTCCTC
CAATCCCAAGACGCCATGCCTTAGTAAATACACAAATCAAGTACCACTGT
ATCAAACGTCCAAATGTGACCTATTCCCTCTCTTGCTTCCCAGATGGGCG
CTATAAACTCCCTAATGAAGTTCCTTTAAACACTTGTGAGCAAAACTACA
ATCCGCCAGGTTCCTCTNCTCAGMCTCCGGCGCTATCCTCTCAATCTACT
AGGAACGGAAATATCCTTCGTTTCATGMCTGCCAATACGGTCAGCCCATC
CTATGAGGGTTATCTTCTCTCACTCGATGATGCGAGCGACAATGAGGATA
AGGACTCAGTACTTAATCAAACATTTGGATGGATTCAGTCTCCCGGATAT
CCGGGGGTCACTGCAGCCAATTATTCGCAATTCAAATTCACTGTTCTTAC
GCATGGATACTATGTACGAATCGGCATCGAGGATGCAGAAGTACAATATG
ATCAAATGGATTTGGATATCGATTTTAAGGATCAACAGAAACAGTTGAGG
AAGGGAGAGTCCTACATTATCAAAAGACAATTTGTGATCMCMCCAGCCTA
TGGAGTATTCAAATTCAGAATCACATTTCAATTCATTGCTCCTTAA
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