EMLSAT00000011537, EMLSAT00000011537-707384 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011537
Unique NameEMLSAT00000011537-707384
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s799supercontigLSalAtl2s799:381305..384324 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011537 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011537EMLSAG00000011537-694303Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051558EMLSAE00000051558-760486Lepeophtheirus salmonisexon
EMLSAE00000051559EMLSAE00000051559-760487Lepeophtheirus salmonisexon
EMLSAE00000051560EMLSAE00000051560-760488Lepeophtheirus salmonisexon
EMLSAE00000051561EMLSAE00000051561-760489Lepeophtheirus salmonisexon
EMLSAE00000051562EMLSAE00000051562-760490Lepeophtheirus salmonisexon
EMLSAE00000051563EMLSAE00000051563-760491Lepeophtheirus salmonisexon
EMLSAE00000051564EMLSAE00000051564-760492Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777083auto777083Lepeophtheirus salmonispolypeptide
EMLSAP00000011537EMLSAP00000011537Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011537

>EMLSAP00000011537 ID=EMLSAP00000011537|Name=EMLSAP00000011537|organism=Lepeophtheirus salmonis|type=polypeptide|length=481bp
MSFSTDEVNFLVYRYLQEAGFSHSAFVFGQESHVSQSNINGALGLLYVEA
EISTGEDGSERLIDGLSLIDAVMPDVVASRKQQQQXDHKSSPVESVKLED
RQQTASAPSDDHPQQQHPMDIDTNIEIPAEKASVLKGHDSEVFICAWNPM
QDLLASGSGDSTARIWHMEDSQQREIILKHCIHRGGQEVPSNKDVTSLDW
NSSGSLLATGSYDGFARIWSTTGKLEKTLGQHKGPIFALKWNKSGNYILS
AGVDRTTIIWDSQTGNHKQQFAFHSAPALDVDWQTDESFASCSTDKCIHV
CKLGVEKPIKSFYGHTNEVNAIKWDPQGKFLASCSDDMTLKVWCMDKESH
VHDLQAHSKEIYTIKWSCTGPGTNNPNADLVLASASFDSTVRLWDVERGS
CLHXLXRHKEPVYSVAFSPDGKFLASGSFDKCVHIWSTVTGKLVHSYKGT
GGIFEVCWNSRGDKVGASASDGTVFVLDLRR
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mRNA from alignment at LSalAtl2s799:381305..384324+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011537-707384 ID=EMLSAT00000011537-707384|Name=EMLSAT00000011537|organism=Lepeophtheirus salmonis|type=mRNA|length=3020bp|location=Sequence derived from alignment at LSalAtl2s799:381305..384324+ (Lepeophtheirus salmonis)
ATGAGTTTTTCAACAGACGAAGTGAATTTTCTAGTGTATCGCTATCTGCA AGAGGCTGGATTTTCTCATTCCGCCTTTGTGTTTGGTCAGGAGTCTCATG TATCTCAGAGTAACATCAATGGGGCTCTGGTTCCTCCAAGAGCCCTCATC TACATAATCCAGAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNAGGGGTTGAGTGTACAGCGACATGACTACTTGTTGTTTC AGGGATTGTTGTATGTAGAAGCCGAGATTTCCACGGGCGAGGACGGGAGT GAGCGTTTAATCGATGGATTGAGTCTCATTGACGCCGTGATGCCGGATGT TGTTGCTTCTCGCAAGCAGCAGCAGCAGMCTGATCATAAGTCATCTCCCG TGGAATCTGTGAAACTCGAGGATCGGCAACAAACTGCTTCAGCTCCTTCG GACGATCATCCACAACAGCAACATCCCATGGACATTGATACGAATATTGA AATTCCAGCTGAAAAAGCAAGTGTTCTCAAGGGGCATGACTCGGAAGTAT TTATATGCGCTTGGAACCCTATGCAAGATTTATTGGCCTCTGGTTCTGGG GACTCCACTGCTAGAATATGGCACATGGAAGATTCTCAACAAAGGGAAAT AATTCTTAAGCATTGCATTCACCGAGGAGGACAAGAAGTAAGAAAAAGAC ATGCATATATGTATCTACAAAGTACATTACATCTTCATCTTTGGATCTAG GTACCTAGCAATAAGGATGTAACATCTCTGGATTGGAATAGTAGTGGGAG TTTATTAGCCACAGGATCTTATGATGGGTTTGCTAGAATTTGGTCTACAA CTGGAAAACTGGAAAAAACCTTAGGCCAACACAAGGGTCCTATATTTGCA TTGAAATGGAATAAAAGTGGAAATTATATTCTAAGTGCAGGTTAGAAGGA TTTCATCTGTAACCAGATAGACATGAACTCTTCTTTAATATTGACTTTGC ATTTTAGGAGTGGATCGTACCACCATTATCTGGGATTCGCAAACTGGAAA TCATAAGCAGCAATTTGCTTTTCATTCTGCTCCTGCGTTAGATGTTGACT GGCAAACAGATGAGAGTTTTGCATCTTGTTCAACAGATAAATGCATTCAT GTTTGTAAGTTGGGTGTAGAAAAACCTATTAAGTCCTTTTATGGACATAC CAATGAGGTAACTAGATTCTTTTATTATTGTTGACTTCTTTGAAAAAAGT ATTTATTATGACAGGTAAACGCAATCAAATGGGATCCTCAAGGTAAATTT CTTGCCTCTTGTTCTGATGATATGACATTAAAGGTTTGGTGTATGGATAA AGAAAGTCATGTACACGATTTACAAGCTCATTCCAAAGAAATTTATACCA TTAAATGGTCATGTACAGGACCAGGAACAAATAATCCAAATGCAGATCTT GTATTAGCATCAGCATCATTTGACAGTACCGTTCGTCTATGGGATGTGGA AAGAGGATCATGTCTTCATKCCTTAAKAAGACATAAAGAACCCGTGTACT CAGTTGCATTTTCCCCAGATGGAAAGTTTTTAGCCTCTGGCTCCTTTGAC AAATGTGTACATATATGGTCTACTGTCACAGGCAAGTTAGTACATAGCTA CAAAGGAACTGGAGGAATTTTCGAGGTGTGCTGGAATTCCCGTGGTGATA AAGTCGGAGCTTCTGCTTCTGATGGCACTGTATTTGTTTTGGATCTTAGG CGATGAAATAATTTTTAATCCTTCTATGTATATCGGTTATTCATTCCTAT ACAACAATCCTCCTTCTTTAAACCTCTTGGAAAACAGTGTTTCCTTATAT GGCATTTTAAGTGAGCATTAAGATGACTTCTTATGTATCTGTTATGCATA TCCTTTATATCAATTTCATCTTTTTAAAAAAAAAGACTTATTTACAAAGA TCTGTAATGTAGCAGTTAAGTTTCTGAACTATTAATTATCGGTAGGTGCA AGTTATTATTGGATTTTGTGTGGATACATCTAATTTAAAATTCATTTCTC TCCTCTTCCCCCCTCTCTCAATACCCTCAAAGATTCGACGAGTCTTTTTC CCTAAGGACGTGAACATATATACCTATAAATATAATCAATTCTCTCTTTT GGGGACTCCATTGTGTATTGTTATCTTATCTACTTTAAAAAAATGAATAA ATACTTAAAGTTAGTCTTTCATATAAGCAATATTTTAAAGTAACTCTGCC ATGCACCATAGAAATCTAGATAATTGGCATTAAGACGGCATTTTTACTTT CCCCAAATTAGTCATTTTTTCGTTTATAATATATATGAGAGTAAAGTAGG CCCCGAATATACTGTATTTAACATTTTTTAAATGTCGAACTACAAATTTA AGCTGAGTTTAATCTTTTTTCACATTTTTTTAGTACTAATTTTTATTCTT AAGAATGATTTTTAAATAAGAAATTCATTACTCACTACGGATATAGTTTA ATATGTTTATTTCCAAAGAATATAAYAAGGATCTATGAKAAAAYGMGGGG GGGGGGGGGNTGTAAAATGACGTCGAWATATTTTAATTTATRTAGAAATC CATTCATGAGCAATCATTATGTTTAAAAAAATAATATATAAAATGGTCTT ATATAGCTAAATCCAATGATTTATAATTATTTTAGTAAGTAAGTCCACCA TAATGAACTTTATTTTCTTCCCTACATAATTTTTATCATAATGCATTATA ATGAATTACTATCTAAGAAACATAACAACTATACATTTGAAATAATTAAT TACAATATGGACTCTTCAGCATCAAATTTATTTCCCCGAATGAACCCATC ATAAAGTGCCTTGAGTACGTATAGCATATACAGATGAAAACCTGTTATTG GAATATACATATAAGTTATAGTAGATCTGCTTTATTAGGAAATTACAATA TGTGTAACTTACATGATACG
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