EMLSAT00000011844, EMLSAT00000011844-707691 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011844
Unique NameEMLSAT00000011844-707691
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s831supercontigLSalAtl2s831:285321..288500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011844 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011844EMLSAG00000011844-694610Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000052989EMLSAE00000052989-761917Lepeophtheirus salmonisexon
EMLSAE00000052990EMLSAE00000052990-761918Lepeophtheirus salmonisexon
EMLSAE00000052991EMLSAE00000052991-761919Lepeophtheirus salmonisexon
EMLSAE00000052992EMLSAE00000052992-761920Lepeophtheirus salmonisexon
EMLSAE00000052993EMLSAE00000052993-761921Lepeophtheirus salmonisexon
EMLSAE00000052994EMLSAE00000052994-761922Lepeophtheirus salmonisexon
EMLSAE00000052995EMLSAE00000052995-761923Lepeophtheirus salmonisexon
EMLSAE00000052996EMLSAE00000052996-761924Lepeophtheirus salmonisexon
EMLSAE00000052997EMLSAE00000052997-761925Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775848auto775848Lepeophtheirus salmonispolypeptide
EMLSAP00000011844EMLSAP00000011844Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011844

>EMLSAP00000011844 ID=EMLSAP00000011844|Name=EMLSAP00000011844|organism=Lepeophtheirus salmonis|type=polypeptide|length=883bp
MAASFNDIQVVQVLSGVHQSDINSVDVSSFGKEDLLVTGSSDQTVRLWKR
LGQDSLFLESDSKLLVRHNYSVNEVRFSPQGTMVASGSTDGTAIITEPRT
AQKLFTFVQPTTHSAIRVCRFSPDSSRLITTGDDETICIWDIRSRSLSLT
IKYHEATIFAADFTSDSCYLISCDANGVICLWDCDSQNERPLVVVKEAHD
LGVLSCDFAPLRNDEYLSNAYTLATGGNDDVIRLWKIYTGLKKHKIELIH
TLSGHPGACVMSLRFSPIKGSNLLISTGGDKLARLWDTSGNKCIAVLNHH
TRYVTSSVFLRHGQFLITGSNDRTAVIWDLNIDNSTTVLDQDYISCEKSI
NRRNEEIYQLLMNNEFLEATLEASLSGHHSDINNLIFISQNQLISCSSDK
TVRHWYLSSSPDFSMLIKSTELNQTCKTDKLIYDVDFCHSSKILVSGDGK
IRHMSEEIEIIGSLPVEELFGVIRSCRITLDCKFVLSGGDDDRIYVWDVE
SLQKIESYEGHEGTIFFIDFVPFKDGVYRIVSGCAMGELKYWIFNPYGDQ
KSQTLTYVEEAHDLGVNCGAFRHQNESKCEEYYLATGGNDCLIKIWKVDN
AHIQPHKSLSGHGGVIMSVSFSKGDSRQLMVSTSGDKTVRLWDGFDFQVL
RVLETQCRYVPCSAFSQPLFELDGSKYMYLATGSNDEFISLWKLSGSLVD
ENIQSFHHTDMKKWSISDVSVWINSLKIKGFNSHIFSESFESLRLDGAQL
AHLTREDLLSKFPETFSEPSAAENVFQTIQWRRNKISNPLSEPTAPSYSK
VFPPSLVNDETEIPSDLICPITHEIMIHPVSCSDGFVYEKTAIEEWLISR
KRTSPMTNLIIHDVSLTFNRQIHRKIQDFLSKD
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mRNA from alignment at LSalAtl2s831:285321..288500-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011844-707691 ID=EMLSAT00000011844-707691|Name=EMLSAT00000011844|organism=Lepeophtheirus salmonis|type=mRNA|length=3180bp|location=Sequence derived from alignment at LSalAtl2s831:285321..288500- (Lepeophtheirus salmonis)
ATGGCTGCGAGCTTCAATGATATTCAAGTGGTACAAGTCCTATCCGGTGT ACACCAAAGTGATATTAATTCAGTGGATGTATCTTCTTTTGGAAAAGAGG ACTTACTTGTCACTGGATCCAGGTTTGGATTATATTAGTTTTACTGTCTA TTTTTAATCAACTAATGACTTTAATATTAAATTGTAGTGATCAAACTGTG AGATTATGGAAGAGGCTCGGKCAGGACTCTCTTTTCCTCGAATCTGATAG CAAGCTCCTTGTTAGGCACAACTATAGTGTCAATGAAGTTCGTTTTTCAC CACAAGGTACGATGGTTGCCTCTGGATCCACTGATGGAACTGCTATTATA ACAGAGCCTCGGGTGATATTATAAACTTTTATTTGTAAGAATGACTAAGA AAATATCATTTTCAATCTATTGCAGACAGCCCAGAAGCTCTTTACTTTTG TTCAGCCCACAACACACTCTGCCATCCGTGTTTGTCGATTCTCTCCCGAC TCATCTCGCCTCATTACGACTGGTGACGACGAAACCATTTGCATTTGGGA CATTCGTTCTAGAAGTTTGTCTCTTACAATTAAATACCATGAAGCAACCA TTTTCGCTGCGGACTTTACATCGGATTCCTGTTATCTCATTTCATGTGAT GCAAACGGAGTTATATGTCTCTGGGATTGTGATTCACAAAATGAAAGACC TTTGGTTGTGGTAAAAGAAGCTCATGACTTGGGTGTACTTTCATGTGACT TTGCTCCCTTGAGAAATGATGAGTATTTGTCGAACGCATACACATTAGCA ACTGGAGGAAATGATGATGTGATCAGACTGTGGAAGATTTATACTGGACT AAAAAAACATAAAATTGAATTGATTCATACTCTTTCTGGTCATCCAGGAG CTTGTGTCATGTCTCTTAGATTTTCCCCAATTAAAGGTTCAAATCTTCTA ATATCTACTGGAGGTGACAAACTTGCTCGTCTATGGGATACAGTAAATTT TTCTCATTTATTTGAAATGAATATCAACTAACTCCATTTTTATGTAGTCT GGGAATAAGTGTATTGCTGTACTCAACCATCACACACGTTATGTGACATC CTCGGTTTTTCTTCGTCATGGGCAATTTCTGATTACTGGTTCAAATGATC GAACAGCAGTTATTTGGGATTTAAATATAGACAACTCAACAACAGTTCTA GATCAAGATTACATTTCATGTGAAAAAAGTATCAATCGTAGGAATGAAGA GATATATCAGTTACTCATGAACAATGAGTTTCTTGAGGCCACTTTAGAAG CATCCTTGTCGGGTAGAGCTAATTTGACACTTTTCATCCAATTTTTATTT ACAACCTAACAGTTTATTATCATTTATAATAGGTCACCACTCTGACATCA ATAATCTTATATTCATATCACAAAACCAACTGATCAGTTGTAGTTCCGAC AAAACTGTTCGACATTGGTATCTATCTTCTTCTCCAGATTTTTCCATGTT GATTAAATCTACTGAATTAAATCAGACATGCAAAACAGATAAATTGATAT ACGATGTGGATTTTTGTCACAGTTCCAAGATATTGGTTAGTGGAGATGGA AAAATTCGACATATGTCTGAAGAAATTGAAATTATAGGATCTCTACCAGT TGAGGAATTATTTGGTGTAATTCGTTCATGCCGAATTACTTTGGATTGCA AATTTGTCCTGTCTGGGGGAGATGATGATAGGATTTATGTTTGGGACGTT GAATCTTTACAAAAAATCGAGTAAGTAGTTTTGAAATATGTATGATTATT TCTAATTATGCAAATCTTTAGATCCTATGAAGGACATGAAGGAACAATTT TTTTTATCGATTTTGTTCCTTTTAAAGATGGTGTATATCGCATTGTGTCA GGTTGTGCAATGGGAGAGTTGAAGTACTGGATTTTTAATCCATATGGGGA TCAAAAATCTCAAACATTGACATATGTTGAGGAAGCACATGATTTGGGAG TAAATTGTGGGGCTTTTAGACATCAAAATGGTAAGTTTGAAGTCAGAAAT TGTAATTGACACTATGAAATTAGATTCAATGTCGTGGCGGAACAGCTCAG ATGATTGATATTATACCTAATATCATTTCAGAATCCAAATGCGAGGAGTA CTATCTTGCTACTGGGGGAAATGATTGCTTGATAAAGATTTGGAAAGTGG ATAATGCTCACATCCAGCCTCATAAGAGTCTGAGTGGACACGGAGGAGTT ATAATGTCTGTTTCTTTCTCAAAAGTAATCTCAAGCTCAATGACTTGATC AAATGATATATTATCTTATTAATTTGTTGTTTTCTTATTTAAGGGAGATA GTCGACAATTAATGGTATCCACTTCTGGTGACAAAACAGTACGTCTATGG GATGGATTTGATTTTCAAGTTCTACGTGTACTAGAAACGCAATGTCGTTA TGTTCCTTGCAGTGCCTTTAGTCAACCCTTATTTGAATTAGATGGATCTA AATATATGTATCTGGCCACTGGCTCAAATGATGAGTTTATATCACTTTGG AAACTAAGTGGTTCTCTCGTAGATGAGAATATCCAATCATTTCACCACAC AGATGTAAAAATGAAATAAACTAATTGATAGATTCAATAAATATTGTTCA TATTTCAGATGAAAAAATGGTCCATCTCAGATGTTTCTGTTTGGATAAAC TCACTCAAGATCAAGGGATTTAACAGTCATATATTTTCAGAATCCTTTGA GAGTTTACGACTTGACGGAGCTCAATTAGCACACTTAACAAGAGAAGATT TATTATCCAAGTTCCCAGAGACTTTTTCCGAACCCTCTGCTGCAGAAAAC GTTTTTCAAACCATACAATGGAGGAGAAACAAAATATCAAATCCTCTTTC AGAGCCCACGGCTCCAAGTTATTCCAAAGTTTTCCCACCTTCTTTAGTGA ATGATGAAACGGAAATCCCTTCCGATCTAATTTGTCCCATCACCCATGAA ATTATGATCCATCCTGTCAGTTGCTCGGATGGTTTCGTATATGAAAAAAC AGCCATTGAGGAATGGCTCATCAGCAGGAAACGAACAAGTCCTATGACAA ATCTAATTATCCATGACGTCAGTCTCACCTTCAACAGACAAATTCATAGA AAAATACAGGATTTTTTATCAAAAGACTGA
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